EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000008525 (Gene tree)
Gene ID: -
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex%2C subunit 6b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 20442 bases
Position: chrNHOQ01001578.1:8898210-8918651
Accession: ZDB-GENE-071004-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012624	Exo_endo_phos	PF03372.23	5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012757	-	6854	-	ENSGAFP00000012624	558 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000008525	cnot6b	62	30.595	ENSGAFG00000002045	pde12	55	30.595
ENSGAFG00000008525	cnot6b	97	74.122	ENSGAFG00000006105	cnot6l	98	74.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008525	cnot6b	100	85.663	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSGAFG00000008525	cnot6b	100	96.959	ENSAPOG00000009994	cnot6b	100	96.959	Acanthochromis_polyacanthus
ENSGAFG00000008525	cnot6b	100	85.714	ENSAMEG00000000949	CNOT6	99	85.714	Ailuropoda_melanoleuca
ENSGAFG00000008525	cnot6b	100	93.918	ENSACIG00000016566	cnot6b	100	93.918	Amphilophus_citrinellus
ENSGAFG00000008525	cnot6b	100	96.959	ENSAOCG00000006893	cnot6b	100	96.959	Amphiprion_ocellaris
ENSGAFG00000008525	cnot6b	100	96.959	ENSAPEG00000016949	cnot6b	100	96.959	Amphiprion_percula
ENSGAFG00000008525	cnot6b	100	93.560	ENSATEG00000007862	cnot6b	100	93.560	Anabas_testudineus
ENSGAFG00000008525	cnot6b	100	86.201	ENSAPLG00000012715	CNOT6	99	86.559	Anas_platyrhynchos
ENSGAFG00000008525	cnot6b	100	86.380	ENSACAG00000016548	CNOT6	100	86.380	Anolis_carolinensis
ENSGAFG00000008525	cnot6b	100	85.842	ENSANAG00000030436	CNOT6	96	85.842	Aotus_nancymaae
ENSGAFG00000008525	cnot6b	100	94.454	ENSACLG00000008279	cnot6b	100	94.454	Astatotilapia_calliptera
ENSGAFG00000008525	cnot6b	100	88.730	ENSAMXG00000019140	cnot6a	100	88.730	Astyanax_mexicanus
ENSGAFG00000008525	cnot6b	100	87.835	ENSAMXG00000034694	cnot6b	100	87.835	Astyanax_mexicanus
ENSGAFG00000008525	cnot6b	100	85.842	ENSBTAG00000017362	CNOT6	100	85.842	Bos_taurus
ENSGAFG00000008525	cnot6b	100	85.484	ENSCJAG00000009795	CNOT6	100	85.484	Callithrix_jacchus
ENSGAFG00000008525	cnot6b	100	86.022	ENSCAFG00000000464	CNOT6	100	86.022	Canis_familiaris
ENSGAFG00000008525	cnot6b	100	86.022	ENSCAFG00020002441	CNOT6	100	86.022	Canis_lupus_dingo
ENSGAFG00000008525	cnot6b	100	85.484	ENSCHIG00000019100	CNOT6	100	85.484	Capra_hircus
ENSGAFG00000008525	cnot6b	100	85.125	ENSTSYG00000003982	CNOT6	100	85.125	Carlito_syrichta
ENSGAFG00000008525	cnot6b	100	81.004	ENSCPOG00000035657	CNOT6	100	81.004	Cavia_porcellus
ENSGAFG00000008525	cnot6b	100	81.183	ENSCCAG00000033670	CNOT6	100	81.183	Cebus_capucinus
ENSGAFG00000008525	cnot6b	100	85.663	ENSCATG00000042014	CNOT6	100	85.663	Cercocebus_atys
ENSGAFG00000008525	cnot6b	100	84.588	ENSCLAG00000010489	CNOT6	100	84.588	Chinchilla_lanigera
ENSGAFG00000008525	cnot6b	100	85.663	ENSCSAG00000008165	CNOT6	100	85.663	Chlorocebus_sabaeus
ENSGAFG00000008525	cnot6b	100	85.125	ENSCHOG00000009680	CNOT6	100	85.484	Choloepus_hoffmanni
ENSGAFG00000008525	cnot6b	100	86.201	ENSCPBG00000008908	CNOT6	100	86.559	Chrysemys_picta_bellii
ENSGAFG00000008525	cnot6b	100	85.842	ENSCANG00000026756	CNOT6	100	85.842	Colobus_angolensis_palliatus
ENSGAFG00000008525	cnot6b	100	84.229	ENSCGRG00001011452	Cnot6	100	84.229	Cricetulus_griseus_chok1gshd
ENSGAFG00000008525	cnot6b	100	82.258	ENSCGRG00000010407	Cnot6	100	82.258	Cricetulus_griseus_crigri
ENSGAFG00000008525	cnot6b	100	95.349	ENSCSEG00000010939	cnot6b	100	95.349	Cynoglossus_semilaevis
ENSGAFG00000008525	cnot6b	100	98.208	ENSCVAG00000010538	cnot6b	100	98.208	Cyprinodon_variegatus
ENSGAFG00000008525	cnot6b	100	88.730	ENSDARG00000008255	cnot6a	100	88.730	Danio_rerio
ENSGAFG00000008525	cnot6b	100	87.478	ENSDARG00000101072	cnot6b	100	87.478	Danio_rerio
ENSGAFG00000008525	cnot6b	100	86.201	ENSDNOG00000041644	CNOT6	100	86.201	Dasypus_novemcinctus
ENSGAFG00000008525	cnot6b	100	76.882	ENSDORG00000001708	Cnot6	100	76.882	Dipodomys_ordii
ENSGAFG00000008525	cnot6b	100	69.286	ENSETEG00000006975	CNOT6	100	69.286	Echinops_telfairi
ENSGAFG00000008525	cnot6b	90	80.639	ENSEASG00005012957	-	99	80.639	Equus_asinus_asinus
ENSGAFG00000008525	cnot6b	100	85.842	ENSEASG00005012794	-	100	85.842	Equus_asinus_asinus
ENSGAFG00000008525	cnot6b	100	86.380	ENSECAG00000019325	CNOT6	100	86.380	Equus_caballus
ENSGAFG00000008525	cnot6b	100	81.004	ENSECAG00000012704	-	99	81.004	Equus_caballus
ENSGAFG00000008525	cnot6b	100	85.663	ENSEEUG00000015382	CNOT6	100	85.663	Erinaceus_europaeus
ENSGAFG00000008525	cnot6b	100	87.478	ENSELUG00000015981	cnot6b	99	87.478	Esox_lucius
ENSGAFG00000008525	cnot6b	100	86.225	ENSELUG00000024580	cnot6a	100	86.225	Esox_lucius
ENSGAFG00000008525	cnot6b	100	86.201	ENSFCAG00000001881	CNOT6	100	86.201	Felis_catus
ENSGAFG00000008525	cnot6b	100	86.380	ENSFALG00000007699	CNOT6	100	86.738	Ficedula_albicollis
ENSGAFG00000008525	cnot6b	100	84.229	ENSFDAG00000001999	CNOT6	100	84.229	Fukomys_damarensis
ENSGAFG00000008525	cnot6b	68	97.179	ENSFHEG00000013756	cnot6b	99	97.179	Fundulus_heteroclitus
ENSGAFG00000008525	cnot6b	95	92.817	ENSGMOG00000009767	cnot6b	99	92.817	Gadus_morhua
ENSGAFG00000008525	cnot6b	100	86.201	ENSGALG00000034316	CNOT6	100	86.559	Gallus_gallus
ENSGAFG00000008525	cnot6b	95	91.871	ENSGACG00000018046	cnot6b	99	91.871	Gasterosteus_aculeatus
ENSGAFG00000008525	cnot6b	100	71.685	ENSGAGG00000012176	CNOT6	100	72.043	Gopherus_agassizii
ENSGAFG00000008525	cnot6b	100	85.663	ENSGGOG00000003675	CNOT6	100	85.663	Gorilla_gorilla
ENSGAFG00000008525	cnot6b	100	94.633	ENSHBUG00000002819	cnot6b	100	94.633	Haplochromis_burtoni
ENSGAFG00000008525	cnot6b	100	84.588	ENSHGLG00000017756	CNOT6	100	84.588	Heterocephalus_glaber_female
ENSGAFG00000008525	cnot6b	100	84.588	ENSHGLG00100005747	CNOT6	100	84.588	Heterocephalus_glaber_male
ENSGAFG00000008525	cnot6b	100	93.560	ENSHCOG00000016176	cnot6b	100	93.560	Hippocampus_comes
ENSGAFG00000008525	cnot6b	100	88.551	ENSIPUG00000019831	cnot6a	100	88.551	Ictalurus_punctatus
ENSGAFG00000008525	cnot6b	100	88.909	ENSIPUG00000017482	cnot6b	100	88.909	Ictalurus_punctatus
ENSGAFG00000008525	cnot6b	100	85.663	ENSSTOG00000002803	CNOT6	100	85.663	Ictidomys_tridecemlineatus
ENSGAFG00000008525	cnot6b	100	85.125	ENSJJAG00000012296	Cnot6	100	85.125	Jaculus_jaculus
ENSGAFG00000008525	cnot6b	100	97.133	ENSKMAG00000004640	cnot6b	100	97.133	Kryptolebias_marmoratus
ENSGAFG00000008525	cnot6b	100	94.454	ENSLBEG00000027917	cnot6b	100	94.454	Labrus_bergylta
ENSGAFG00000008525	cnot6b	100	92.308	ENSLOCG00000010102	cnot6b	99	92.308	Lepisosteus_oculatus
ENSGAFG00000008525	cnot6b	100	86.380	ENSLAFG00000016742	CNOT6	100	86.380	Loxodonta_africana
ENSGAFG00000008525	cnot6b	100	85.663	ENSMFAG00000030867	CNOT6	100	85.663	Macaca_fascicularis
ENSGAFG00000008525	cnot6b	100	85.663	ENSMMUG00000018690	CNOT6	100	85.663	Macaca_mulatta
ENSGAFG00000008525	cnot6b	100	85.663	ENSMNEG00000038565	CNOT6	100	85.663	Macaca_nemestrina
ENSGAFG00000008525	cnot6b	100	85.663	ENSMLEG00000010555	CNOT6	100	85.663	Mandrillus_leucophaeus
ENSGAFG00000008525	cnot6b	100	96.780	ENSMAMG00000007515	cnot6b	100	96.780	Mastacembelus_armatus
ENSGAFG00000008525	cnot6b	100	94.454	ENSMZEG00005012899	cnot6b	100	94.454	Maylandia_zebra
ENSGAFG00000008525	cnot6b	100	84.946	ENSMAUG00000019798	Cnot6	100	84.946	Mesocricetus_auratus
ENSGAFG00000008525	cnot6b	98	78.165	ENSMICG00000028378	-	99	78.165	Microcebus_murinus
ENSGAFG00000008525	cnot6b	100	84.229	ENSMICG00000013018	-	100	84.229	Microcebus_murinus
ENSGAFG00000008525	cnot6b	100	84.946	ENSMOCG00000021662	Cnot6	100	84.946	Microtus_ochrogaster
ENSGAFG00000008525	cnot6b	100	92.308	ENSMMOG00000003227	cnot6b	100	92.308	Mola_mola
ENSGAFG00000008525	cnot6b	100	85.305	ENSMODG00000003979	CNOT6	100	85.663	Monodelphis_domestica
ENSGAFG00000008525	cnot6b	100	96.243	ENSMALG00000014251	cnot6b	100	96.243	Monopterus_albus
ENSGAFG00000008525	cnot6b	100	85.125	MGP_CAROLIEiJ_G0016277	Cnot6	100	85.125	Mus_caroli
ENSGAFG00000008525	cnot6b	100	85.125	ENSMUSG00000020362	Cnot6	100	85.125	Mus_musculus
ENSGAFG00000008525	cnot6b	100	85.125	MGP_PahariEiJ_G0017413	Cnot6	100	85.125	Mus_pahari
ENSGAFG00000008525	cnot6b	100	85.125	MGP_SPRETEiJ_G0017122	Cnot6	100	85.125	Mus_spretus
ENSGAFG00000008525	cnot6b	100	86.380	ENSMPUG00000000587	CNOT6	96	86.380	Mustela_putorius_furo
ENSGAFG00000008525	cnot6b	100	84.547	ENSMLUG00000010257	CNOT6	100	84.547	Myotis_lucifugus
ENSGAFG00000008525	cnot6b	100	84.229	ENSNGAG00000008269	Cnot6	100	84.588	Nannospalax_galili
ENSGAFG00000008525	cnot6b	100	94.633	ENSNBRG00000010798	cnot6b	100	94.633	Neolamprologus_brichardi
ENSGAFG00000008525	cnot6b	100	84.588	ENSNLEG00000002322	CNOT6	100	84.588	Nomascus_leucogenys
ENSGAFG00000008525	cnot6b	81	80.930	ENSMEUG00000000025	CNOT6	81	81.860	Notamacropus_eugenii
ENSGAFG00000008525	cnot6b	88	86.158	ENSOPRG00000008244	-	88	86.158	Ochotona_princeps
ENSGAFG00000008525	cnot6b	100	83.692	ENSODEG00000007041	CNOT6	100	83.692	Octodon_degus
ENSGAFG00000008525	cnot6b	75	93.617	ENSONIG00000013027	cnot6b	99	93.617	Oreochromis_niloticus
ENSGAFG00000008525	cnot6b	100	85.842	ENSOANG00000010226	CNOT6	100	85.842	Ornithorhynchus_anatinus
ENSGAFG00000008525	cnot6b	100	84.643	ENSOCUG00000011083	CNOT6	100	84.643	Oryctolagus_cuniculus
ENSGAFG00000008525	cnot6b	100	95.886	ENSORLG00000005059	cnot6b	100	95.886	Oryzias_latipes
ENSGAFG00000008525	cnot6b	100	95.886	ENSORLG00020012784	cnot6b	100	95.886	Oryzias_latipes_hni
ENSGAFG00000008525	cnot6b	94	95.411	ENSORLG00015022658	cnot6b	98	95.411	Oryzias_latipes_hsok
ENSGAFG00000008525	cnot6b	100	95.707	ENSOMEG00000005295	cnot6b	100	95.707	Oryzias_melastigma
ENSGAFG00000008525	cnot6b	94	84.762	ENSOGAG00000032470	CNOT6	100	84.762	Otolemur_garnettii
ENSGAFG00000008525	cnot6b	97	84.899	ENSOARG00000001003	CNOT6	100	84.899	Ovis_aries
ENSGAFG00000008525	cnot6b	100	85.663	ENSPPAG00000032253	CNOT6	100	85.663	Pan_paniscus
ENSGAFG00000008525	cnot6b	100	86.022	ENSPPRG00000011912	CNOT6	100	86.022	Panthera_pardus
ENSGAFG00000008525	cnot6b	100	86.022	ENSPTIG00000016794	CNOT6	100	86.022	Panthera_tigris_altaica
ENSGAFG00000008525	cnot6b	100	85.663	ENSPTRG00000017636	CNOT6	100	85.663	Pan_troglodytes
ENSGAFG00000008525	cnot6b	100	85.663	ENSPANG00000016191	CNOT6	100	85.663	Papio_anubis
ENSGAFG00000008525	cnot6b	100	90.698	ENSPKIG00000021368	cnot6b	100	90.698	Paramormyrops_kingsleyae
ENSGAFG00000008525	cnot6b	98	85.872	ENSPSIG00000017307	CNOT6	100	86.239	Pelodiscus_sinensis
ENSGAFG00000008525	cnot6b	100	94.097	ENSPMGG00000011238	cnot6b	100	94.097	Periophthalmus_magnuspinnatus
ENSGAFG00000008525	cnot6b	100	84.050	ENSPEMG00000000627	Cnot6	100	84.409	Peromyscus_maniculatus_bairdii
ENSGAFG00000008525	cnot6b	100	85.484	ENSPCIG00000020319	CNOT6	99	85.842	Phascolarctos_cinereus
ENSGAFG00000008525	cnot6b	100	98.925	ENSPFOG00000006291	cnot6b	100	98.925	Poecilia_formosa
ENSGAFG00000008525	cnot6b	100	94.624	ENSPLAG00000008266	cnot6b	100	94.624	Poecilia_latipinna
ENSGAFG00000008525	cnot6b	100	99.104	ENSPMEG00000009091	cnot6b	100	99.104	Poecilia_mexicana
ENSGAFG00000008525	cnot6b	100	97.133	ENSPREG00000003713	cnot6b	100	97.133	Poecilia_reticulata
ENSGAFG00000008525	cnot6b	100	85.663	ENSPPYG00000016137	CNOT6	100	85.663	Pongo_abelii
ENSGAFG00000008525	cnot6b	71	83.146	ENSPCAG00000005599	-	71	83.146	Procavia_capensis
ENSGAFG00000008525	cnot6b	100	79.928	ENSPCOG00000017359	CNOT6	100	80.645	Propithecus_coquereli
ENSGAFG00000008525	cnot6b	100	82.616	ENSPVAG00000003069	CNOT6	100	82.616	Pteropus_vampyrus
ENSGAFG00000008525	cnot6b	100	94.633	ENSPNYG00000000321	cnot6b	100	94.633	Pundamilia_nyererei
ENSGAFG00000008525	cnot6b	100	89.088	ENSPNAG00000028816	cnot6b	100	89.088	Pygocentrus_nattereri
ENSGAFG00000008525	cnot6b	100	89.088	ENSPNAG00000029586	cnot6a	100	89.088	Pygocentrus_nattereri
ENSGAFG00000008525	cnot6b	100	84.409	ENSRNOG00000054891	Cnot6	100	84.409	Rattus_norvegicus
ENSGAFG00000008525	cnot6b	100	85.484	ENSRBIG00000004309	CNOT6	100	85.484	Rhinopithecus_bieti
ENSGAFG00000008525	cnot6b	100	85.484	ENSRROG00000035378	CNOT6	100	85.484	Rhinopithecus_roxellana
ENSGAFG00000008525	cnot6b	100	85.842	ENSSBOG00000030494	CNOT6	100	85.842	Saimiri_boliviensis_boliviensis
ENSGAFG00000008525	cnot6b	100	85.305	ENSSHAG00000017436	CNOT6	100	85.663	Sarcophilus_harrisii
ENSGAFG00000008525	cnot6b	100	91.234	ENSSFOG00015015133	CNOT6	100	91.592	Scleropages_formosus
ENSGAFG00000008525	cnot6b	100	89.982	ENSSFOG00015022383	cnot6a	96	89.982	Scleropages_formosus
ENSGAFG00000008525	cnot6b	100	94.812	ENSSMAG00000003084	cnot6b	100	94.812	Scophthalmus_maximus
ENSGAFG00000008525	cnot6b	100	96.601	ENSSDUG00000004151	cnot6b	100	96.601	Seriola_dumerili
ENSGAFG00000008525	cnot6b	100	96.422	ENSSLDG00000004448	cnot6b	100	96.422	Seriola_lalandi_dorsalis
ENSGAFG00000008525	cnot6b	64	67.318	ENSSARG00000012650	-	100	67.318	Sorex_araneus
ENSGAFG00000008525	cnot6b	100	86.738	ENSSPUG00000007893	CNOT6	100	87.097	Sphenodon_punctatus
ENSGAFG00000008525	cnot6b	100	97.138	ENSSPAG00000000149	cnot6b	100	97.138	Stegastes_partitus
ENSGAFG00000008525	cnot6b	100	85.663	ENSSSCG00000014009	CNOT6	100	85.663	Sus_scrofa
ENSGAFG00000008525	cnot6b	100	86.022	ENSTGUG00000001119	CNOT6	100	86.380	Taeniopygia_guttata
ENSGAFG00000008525	cnot6b	100	92.832	ENSTRUG00000002818	cnot6b	100	92.832	Takifugu_rubripes
ENSGAFG00000008525	cnot6b	100	93.907	ENSTNIG00000004443	cnot6b	99	93.907	Tetraodon_nigroviridis
ENSGAFG00000008525	cnot6b	87	61.807	ENSTBEG00000017094	-	100	61.807	Tupaia_belangeri
ENSGAFG00000008525	cnot6b	100	85.842	ENSTTRG00000009363	CNOT6	100	85.842	Tursiops_truncatus
ENSGAFG00000008525	cnot6b	90	75.149	ENSUAMG00000004579	CNOT6	99	75.149	Ursus_americanus
ENSGAFG00000008525	cnot6b	100	81.880	ENSUMAG00000024577	CNOT6	100	81.880	Ursus_maritimus
ENSGAFG00000008525	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSGAFG00000008525	cnot6b	100	86.022	ENSVVUG00000026940	CNOT6	100	86.022	Vulpes_vulpes
ENSGAFG00000008525	cnot6b	100	94.982	ENSXCOG00000003360	cnot6b	100	94.982	Xiphophorus_couchianus
ENSGAFG00000008525	cnot6b	100	99.104	ENSXMAG00000008730	cnot6b	100	99.104	Xiphophorus_maculatus