EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000008560 (Gene tree)
Gene ID: -
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5890 bases
Position: chrNHOQ01002364.1:773366-779255
Accession: ZDB-GENE-040801-185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012658	MMR_HSR1	PF01926.23	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012797	-	546	-	ENSGAFP00000012664	181 (aa)	-	-
ENSGAFT00000012791	-	2617	-	ENSGAFP00000012658	205 (aa)	-	UPI000DD240A4

Gene Model

Click here to download ENSGAFG00000008560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000008560	rab18b	83	42.105	ENSGAFG00000019872	rab41	79	42.105
ENSGAFG00000008560	rab18b	90	43.011	ENSGAFG00000003642	-	90	41.827
ENSGAFG00000008560	rab18b	93	33.508	ENSGAFG00000010541	rras	95	33.508
ENSGAFG00000008560	rab18b	74	40.000	ENSGAFG00000020102	si:dkey-13a21.4	76	40.000
ENSGAFG00000008560	rab18b	95	34.673	ENSGAFG00000020476	RAB7A	96	34.673
ENSGAFG00000008560	rab18b	80	44.512	ENSGAFG00000005679	rab11ba	75	44.512
ENSGAFG00000008560	rab18b	94	40.722	ENSGAFG00000001301	rab22a	98	40.722
ENSGAFG00000008560	rab18b	92	42.932	ENSGAFG00000005477	rab4a	89	42.932
ENSGAFG00000008560	rab18b	83	43.605	ENSGAFG00000006932	-	81	43.605
ENSGAFG00000008560	rab18b	81	47.619	ENSGAFG00000002756	rab15	77	47.619
ENSGAFG00000008560	rab18b	85	40.909	ENSGAFG00000010916	rab6bb	83	40.909
ENSGAFG00000008560	rab18b	72	42.484	ENSGAFG00000015249	-	63	42.763
ENSGAFG00000008560	rab18b	83	42.690	ENSGAFG00000006356	rab6a	80	42.690
ENSGAFG00000008560	rab18b	79	39.157	ENSGAFG00000000591	rab9a	76	39.157
ENSGAFG00000008560	rab18b	95	45.455	ENSGAFG00000006846	rab2a	97	45.455
ENSGAFG00000008560	rab18b	73	34.591	ENSGAFG00000014541	rras2	84	34.831
ENSGAFG00000008560	rab18b	83	35.632	ENSGAFG00000005188	rabl2	76	35.632
ENSGAFG00000008560	rab18b	97	40.394	ENSGAFG00000011619	rab5aa	91	40.394
ENSGAFG00000008560	rab18b	80	34.756	ENSGAFG00000021765	kras	87	34.756
ENSGAFG00000008560	rab18b	82	37.059	ENSGAFG00000018295	si:ch73-116o1.2	96	33.498
ENSGAFG00000008560	rab18b	84	40.782	ENSGAFG00000011713	rab25a	90	40.782
ENSGAFG00000008560	rab18b	71	46.259	ENSGAFG00000015490	rab33a	53	46.259
ENSGAFG00000008560	rab18b	77	30.178	ENSGAFG00000019285	rasl11b	67	30.178
ENSGAFG00000008560	rab18b	80	44.311	ENSGAFG00000008183	si:dkey-34d22.5	75	44.311
ENSGAFG00000008560	rab18b	83	42.197	ENSGAFG00000004604	RAB39B	81	42.197
ENSGAFG00000008560	rab18b	74	42.484	ENSGAFG00000019659	rab33ba	63	42.484
ENSGAFG00000008560	rab18b	80	43.860	ENSGAFG00000014730	-	84	43.860
ENSGAFG00000008560	rab18b	75	37.179	ENSGAFG00000015135	rab36	60	37.179
ENSGAFG00000008560	rab18b	95	44.103	ENSGAFG00000000918	-	96	44.103
ENSGAFG00000008560	rab18b	93	35.897	ENSGAFG00000004099	rab9b	87	35.897
ENSGAFG00000008560	rab18b	80	42.424	ENSGAFG00000002141	rab42a	76	42.424
ENSGAFG00000008560	rab18b	80	38.690	ENSGAFG00000018916	-	74	38.690
ENSGAFG00000008560	rab18b	77	33.333	ENSGAFG00000020906	rheb	86	33.333
ENSGAFG00000008560	rab18b	87	34.444	ENSGAFG00000021814	hrasb	95	34.444
ENSGAFG00000008560	rab18b	93	84.293	ENSGAFG00000002790	rab18a	99	83.333
ENSGAFG00000008560	rab18b	80	48.171	ENSGAFG00000014787	-	82	48.171
ENSGAFG00000008560	rab18b	93	31.500	ENSGAFG00000000629	RAB29	97	31.500
ENSGAFG00000008560	rab18b	87	49.721	ENSGAFG00000020309	rab30	94	49.721
ENSGAFG00000008560	rab18b	87	44.444	ENSGAFG00000017305	RAB15	92	48.252
ENSGAFG00000008560	rab18b	93	44.845	ENSGAFG00000019305	rab1ba	96	44.845
ENSGAFG00000008560	rab18b	77	30.864	ENSGAFG00000021738	rhebl1	85	30.864
ENSGAFG00000008560	rab18b	95	44.103	ENSGAFG00000001289	rab1ab	96	44.103
ENSGAFG00000008560	rab18b	96	38.191	ENSGAFG00000017270	rab6ba	95	38.191
ENSGAFG00000008560	rab18b	85	42.614	ENSGAFG00000021725	rab11al	81	42.614
ENSGAFG00000008560	rab18b	82	45.882	ENSGAFG00000021724	rab25b	81	45.882
ENSGAFG00000008560	rab18b	95	34.171	ENSGAFG00000021688	-	96	34.171
ENSGAFG00000008560	rab18b	95	41.294	ENSGAFG00000000884	rab5c	91	41.294
ENSGAFG00000008560	rab18b	80	47.561	ENSGAFG00000005388	si:dkey-16l2.16	78	47.561
ENSGAFG00000008560	rab18b	80	44.512	ENSGAFG00000007102	rab11bb	75	44.512
ENSGAFG00000008560	rab18b	87	33.516	ENSGAFG00000012579	rab34a	68	33.516
ENSGAFG00000008560	rab18b	83	37.209	ENSGAFG00000007684	rab23	75	37.013
ENSGAFG00000008560	rab18b	79	44.444	ENSGAFG00000016549	rab11a	75	44.444
ENSGAFG00000008560	rab18b	92	46.032	ENSGAFG00000015702	zgc:171927	73	46.032
ENSGAFG00000008560	rab18b	71	40.816	ENSGAFG00000021202	zgc:101559	63	40.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008560	rab18b	99	84.390	ENSG00000099246	RAB18	99	84.878	Homo_sapiens
ENSGAFG00000008560	rab18b	100	93.659	ENSAPOG00000019881	rab18b	100	93.659	Acanthochromis_polyacanthus
ENSGAFG00000008560	rab18b	99	73.617	ENSAMEG00000015990	RAB18	99	74.043	Ailuropoda_melanoleuca
ENSGAFG00000008560	rab18b	100	94.146	ENSACIG00000008102	rab18b	100	94.146	Amphilophus_citrinellus
ENSGAFG00000008560	rab18b	100	93.171	ENSAOCG00000013479	rab18b	100	93.171	Amphiprion_ocellaris
ENSGAFG00000008560	rab18b	100	92.683	ENSAPEG00000022923	rab18b	100	92.683	Amphiprion_percula
ENSGAFG00000008560	rab18b	99	91.667	ENSATEG00000002952	rab18b	99	91.667	Anabas_testudineus
ENSGAFG00000008560	rab18b	99	84.390	ENSANAG00000035856	RAB18	99	84.878	Aotus_nancymaae
ENSGAFG00000008560	rab18b	100	93.659	ENSACLG00000015289	rab18b	100	93.659	Astatotilapia_calliptera
ENSGAFG00000008560	rab18b	99	86.829	ENSAMXG00000042073	rab18b	99	86.829	Astyanax_mexicanus
ENSGAFG00000008560	rab18b	99	83.415	ENSBTAG00000050873	-	99	83.415	Bos_taurus
ENSGAFG00000008560	rab18b	99	84.390	ENSBTAG00000009871	RAB18	88	84.878	Bos_taurus
ENSGAFG00000008560	rab18b	99	84.390	ENSCJAG00000045749	RAB18	99	84.878	Callithrix_jacchus
ENSGAFG00000008560	rab18b	99	84.390	ENSCAFG00020003253	RAB18	99	84.878	Canis_lupus_dingo
ENSGAFG00000008560	rab18b	99	84.390	ENSCHIG00000008749	RAB18	99	84.878	Capra_hircus
ENSGAFG00000008560	rab18b	99	83.902	ENSTSYG00000013092	RAB18	99	84.390	Carlito_syrichta
ENSGAFG00000008560	rab18b	99	84.390	ENSCPOG00000032827	RAB18	99	84.390	Cavia_porcellus
ENSGAFG00000008560	rab18b	99	84.390	ENSCCAG00000006762	RAB18	99	84.878	Cebus_capucinus
ENSGAFG00000008560	rab18b	99	84.390	ENSCATG00000009672	RAB18	99	84.878	Cercocebus_atys
ENSGAFG00000008560	rab18b	99	84.390	ENSCSAG00000011749	RAB18	99	84.878	Chlorocebus_sabaeus
ENSGAFG00000008560	rab18b	99	84.390	ENSCANG00000035397	RAB18	99	84.878	Colobus_angolensis_palliatus
ENSGAFG00000008560	rab18b	99	84.390	ENSCGRG00001017519	Rab18	99	84.390	Cricetulus_griseus_chok1gshd
ENSGAFG00000008560	rab18b	99	84.390	ENSCGRG00000017201	Rab18	99	84.390	Cricetulus_griseus_crigri
ENSGAFG00000008560	rab18b	99	89.216	ENSCSEG00000016803	rab18b	99	92.308	Cynoglossus_semilaevis
ENSGAFG00000008560	rab18b	99	86.275	ENSDARG00000098344	rab18b	99	86.275	Danio_rerio
ENSGAFG00000008560	rab18b	99	84.390	ENSDNOG00000047713	RAB18	99	84.878	Dasypus_novemcinctus
ENSGAFG00000008560	rab18b	55	85.841	ENSDNOG00000038845	-	75	85.841	Dasypus_novemcinctus
ENSGAFG00000008560	rab18b	85	81.609	ENSDORG00000029360	-	83	81.609	Dipodomys_ordii
ENSGAFG00000008560	rab18b	99	83.902	ENSDORG00000028596	-	99	83.902	Dipodomys_ordii
ENSGAFG00000008560	rab18b	99	84.390	ENSEASG00005007164	RAB18	99	84.878	Equus_asinus_asinus
ENSGAFG00000008560	rab18b	99	84.390	ENSECAG00000017521	RAB18	88	84.878	Equus_caballus
ENSGAFG00000008560	rab18b	100	84.466	ENSELUG00000016450	rab18b	100	84.466	Esox_lucius
ENSGAFG00000008560	rab18b	99	84.390	ENSFCAG00000027161	RAB18	99	84.878	Felis_catus
ENSGAFG00000008560	rab18b	94	85.417	ENSFALG00000007160	RAB18	99	83.981	Ficedula_albicollis
ENSGAFG00000008560	rab18b	100	96.098	ENSFHEG00000020035	rab18b	100	96.098	Fundulus_heteroclitus
ENSGAFG00000008560	rab18b	100	83.415	ENSGMOG00000016608	rab18b	100	83.415	Gadus_morhua
ENSGAFG00000008560	rab18b	99	84.390	ENSGALG00000007435	RAB18	99	84.878	Gallus_gallus
ENSGAFG00000008560	rab18b	100	88.293	ENSGACG00000016395	rab18b	100	88.293	Gasterosteus_aculeatus
ENSGAFG00000008560	rab18b	99	84.390	ENSGGOG00000008086	RAB18	99	84.878	Gorilla_gorilla
ENSGAFG00000008560	rab18b	100	93.659	ENSHBUG00000003696	rab18b	100	93.659	Haplochromis_burtoni
ENSGAFG00000008560	rab18b	99	71.078	ENSHGLG00000007301	-	95	71.078	Heterocephalus_glaber_female
ENSGAFG00000008560	rab18b	99	84.878	ENSHGLG00000004365	RAB18	99	84.878	Heterocephalus_glaber_female
ENSGAFG00000008560	rab18b	99	84.878	ENSHGLG00100013089	-	99	84.878	Heterocephalus_glaber_male
ENSGAFG00000008560	rab18b	99	71.078	ENSHGLG00100009117	-	95	71.078	Heterocephalus_glaber_male
ENSGAFG00000008560	rab18b	100	91.707	ENSHCOG00000002217	rab18b	100	91.707	Hippocampus_comes
ENSGAFG00000008560	rab18b	99	84.314	ENSIPUG00000010859	rab18b	99	84.314	Ictalurus_punctatus
ENSGAFG00000008560	rab18b	99	84.390	ENSSTOG00000014560	-	99	84.390	Ictidomys_tridecemlineatus
ENSGAFG00000008560	rab18b	100	95.122	ENSKMAG00000007364	rab18b	100	95.122	Kryptolebias_marmoratus
ENSGAFG00000008560	rab18b	100	91.220	ENSLBEG00000019428	rab18b	100	91.220	Labrus_bergylta
ENSGAFG00000008560	rab18b	99	75.980	ENSLACG00000011256	rab18b	99	75.980	Latimeria_chalumnae
ENSGAFG00000008560	rab18b	94	85.938	ENSLAFG00000015582	RAB18	99	84.878	Loxodonta_africana
ENSGAFG00000008560	rab18b	99	84.390	ENSMFAG00000006430	RAB18	99	84.878	Macaca_fascicularis
ENSGAFG00000008560	rab18b	99	84.158	ENSMMUG00000046971	RAB18	72	84.158	Macaca_mulatta
ENSGAFG00000008560	rab18b	99	84.390	ENSMNEG00000038180	RAB18	99	84.878	Macaca_nemestrina
ENSGAFG00000008560	rab18b	99	84.390	ENSMLEG00000033595	RAB18	99	84.878	Mandrillus_leucophaeus
ENSGAFG00000008560	rab18b	99	90.196	ENSMAMG00000018445	rab18b	99	90.196	Mastacembelus_armatus
ENSGAFG00000008560	rab18b	100	93.659	ENSMZEG00005008244	rab18b	100	93.659	Maylandia_zebra
ENSGAFG00000008560	rab18b	99	75.980	ENSMAUG00000020698	-	99	75.980	Mesocricetus_auratus
ENSGAFG00000008560	rab18b	94	85.938	ENSMICG00000017280	RAB18	99	84.878	Microcebus_murinus
ENSGAFG00000008560	rab18b	99	84.390	ENSMOCG00000013044	Rab18	99	84.390	Microtus_ochrogaster
ENSGAFG00000008560	rab18b	100	77.419	ENSMMOG00000017849	rab18b	100	77.880	Mola_mola
ENSGAFG00000008560	rab18b	99	77.941	ENSMODG00000024936	-	99	77.941	Monodelphis_domestica
ENSGAFG00000008560	rab18b	99	84.804	ENSMODG00000008253	RAB18	99	84.804	Monodelphis_domestica
ENSGAFG00000008560	rab18b	99	91.667	ENSMALG00000005069	rab18b	99	91.667	Monopterus_albus
ENSGAFG00000008560	rab18b	99	84.878	MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	Mus_caroli
ENSGAFG00000008560	rab18b	99	84.878	ENSMUSG00000073639	Rab18	99	84.878	Mus_musculus
ENSGAFG00000008560	rab18b	99	84.878	MGP_PahariEiJ_G0018716	Rab18	99	84.878	Mus_pahari
ENSGAFG00000008560	rab18b	99	84.878	MGP_SPRETEiJ_G0022894	Rab18	99	84.878	Mus_spretus
ENSGAFG00000008560	rab18b	99	84.390	ENSMPUG00000010592	RAB18	99	84.878	Mustela_putorius_furo
ENSGAFG00000008560	rab18b	99	73.617	ENSMLUG00000027295	RAB18	99	74.043	Myotis_lucifugus
ENSGAFG00000008560	rab18b	99	84.390	ENSNGAG00000001465	Rab18	99	84.390	Nannospalax_galili
ENSGAFG00000008560	rab18b	100	93.171	ENSNBRG00000008137	rab18b	100	93.171	Neolamprologus_brichardi
ENSGAFG00000008560	rab18b	99	84.390	ENSNLEG00000016970	RAB18	99	84.878	Nomascus_leucogenys
ENSGAFG00000008560	rab18b	99	84.390	ENSODEG00000004150	-	99	84.390	Octodon_degus
ENSGAFG00000008560	rab18b	100	93.171	ENSONIG00000018673	rab18b	100	93.171	Oreochromis_niloticus
ENSGAFG00000008560	rab18b	91	88.235	ENSOANG00000021391	RAB18	99	85.366	Ornithorhynchus_anatinus
ENSGAFG00000008560	rab18b	99	83.902	ENSOCUG00000022307	RAB18	99	83.902	Oryctolagus_cuniculus
ENSGAFG00000008560	rab18b	100	93.659	ENSORLG00000009609	rab18b	100	93.659	Oryzias_latipes
ENSGAFG00000008560	rab18b	100	93.659	ENSORLG00020011590	rab18b	100	93.659	Oryzias_latipes_hni
ENSGAFG00000008560	rab18b	100	93.659	ENSORLG00015007182	rab18b	100	93.659	Oryzias_latipes_hsok
ENSGAFG00000008560	rab18b	100	94.634	ENSOMEG00000007546	rab18b	100	94.634	Oryzias_melastigma
ENSGAFG00000008560	rab18b	94	85.938	ENSOGAG00000028015	RAB18	99	84.878	Otolemur_garnettii
ENSGAFG00000008560	rab18b	99	84.390	ENSOARG00000016208	RAB18	99	84.878	Ovis_aries
ENSGAFG00000008560	rab18b	99	84.390	ENSPPAG00000041625	RAB18	99	84.878	Pan_paniscus
ENSGAFG00000008560	rab18b	99	84.390	ENSPPRG00000010314	RAB18	99	84.878	Panthera_pardus
ENSGAFG00000008560	rab18b	99	84.390	ENSPTIG00000011667	RAB18	99	84.878	Panthera_tigris_altaica
ENSGAFG00000008560	rab18b	99	84.390	ENSPTRG00000002384	RAB18	99	84.878	Pan_troglodytes
ENSGAFG00000008560	rab18b	99	84.390	ENSPANG00000023005	RAB18	99	84.878	Papio_anubis
ENSGAFG00000008560	rab18b	98	81.863	ENSPMAG00000005322	rab18b	98	81.863	Petromyzon_marinus
ENSGAFG00000008560	rab18b	99	85.294	ENSPCIG00000028705	-	88	85.294	Phascolarctos_cinereus
ENSGAFG00000008560	rab18b	100	99.024	ENSPFOG00000013491	rab18b	100	99.024	Poecilia_formosa
ENSGAFG00000008560	rab18b	100	99.024	ENSPLAG00000019136	rab18b	100	99.024	Poecilia_latipinna
ENSGAFG00000008560	rab18b	100	99.024	ENSPMEG00000008223	rab18b	100	99.024	Poecilia_mexicana
ENSGAFG00000008560	rab18b	99	84.390	ENSPPYG00000002172	RAB18	99	84.878	Pongo_abelii
ENSGAFG00000008560	rab18b	94	85.938	ENSPCOG00000018906	RAB18	99	84.878	Propithecus_coquereli
ENSGAFG00000008560	rab18b	100	93.659	ENSPNYG00000001751	rab18b	100	93.659	Pundamilia_nyererei
ENSGAFG00000008560	rab18b	99	85.784	ENSPNAG00000002404	rab18b	99	85.784	Pygocentrus_nattereri
ENSGAFG00000008560	rab18b	99	84.390	ENSRNOG00000018972	Rab18	99	84.390	Rattus_norvegicus
ENSGAFG00000008560	rab18b	99	83.902	ENSRBIG00000035948	RAB18	99	84.390	Rhinopithecus_bieti
ENSGAFG00000008560	rab18b	99	84.390	ENSRROG00000040563	RAB18	99	84.878	Rhinopithecus_roxellana
ENSGAFG00000008560	rab18b	99	85.294	ENSSHAG00000007613	RAB18	99	85.294	Sarcophilus_harrisii
ENSGAFG00000008560	rab18b	100	91.707	ENSSMAG00000011814	rab18b	100	91.707	Scophthalmus_maximus
ENSGAFG00000008560	rab18b	100	92.683	ENSSDUG00000005960	rab18b	100	92.683	Seriola_dumerili
ENSGAFG00000008560	rab18b	100	92.683	ENSSLDG00000006014	rab18b	100	92.683	Seriola_lalandi_dorsalis
ENSGAFG00000008560	rab18b	100	92.683	ENSSPAG00000020875	rab18b	100	92.683	Stegastes_partitus
ENSGAFG00000008560	rab18b	99	84.390	ENSSSCG00000028655	RAB18	99	84.878	Sus_scrofa
ENSGAFG00000008560	rab18b	94	74.886	ENSTGUG00000001105	-	99	74.249	Taeniopygia_guttata
ENSGAFG00000008560	rab18b	100	91.707	ENSTRUG00000004283	rab18b	100	91.707	Takifugu_rubripes
ENSGAFG00000008560	rab18b	100	88.835	ENSTNIG00000007882	rab18b	100	88.835	Tetraodon_nigroviridis
ENSGAFG00000008560	rab18b	99	84.390	ENSVVUG00000001705	RAB18	99	84.878	Vulpes_vulpes
ENSGAFG00000008560	rab18b	100	98.537	ENSXMAG00000006945	rab18b	100	98.537	Xiphophorus_maculatus