EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008647 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7827 bases
Position: chrNHOQ01002390.1:2336685-2344511
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000012785	PolyA_pol	PF01743.20	2.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000012920	-	2773	-	ENSGAFP00000012785	425 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008647	trnt1	99	67.612	ENSG00000072756	TRNT1	96	67.612	Homo_sapiens
ENSGAFG00000008647	trnt1	99	83.059	ENSAPOG00000013687	trnt1	99	83.059	Acanthochromis_polyacanthus
ENSGAFG00000008647	trnt1	96	68.382	ENSAMEG00000014520	TRNT1	94	68.382	Ailuropoda_melanoleuca
ENSGAFG00000008647	trnt1	99	84.000	ENSACIG00000021706	trnt1	99	84.000	Amphilophus_citrinellus
ENSGAFG00000008647	trnt1	99	85.211	ENSAOCG00000024612	trnt1	99	85.211	Amphiprion_ocellaris
ENSGAFG00000008647	trnt1	96	77.859	ENSAPEG00000022627	trnt1	95	77.859	Amphiprion_percula
ENSGAFG00000008647	trnt1	95	86.849	ENSATEG00000008928	trnt1	99	86.849	Anabas_testudineus
ENSGAFG00000008647	trnt1	90	72.324	ENSAPLG00000004258	TRNT1	95	72.324	Anas_platyrhynchos
ENSGAFG00000008647	trnt1	96	67.726	ENSACAG00000005657	TRNT1	93	67.726	Anolis_carolinensis
ENSGAFG00000008647	trnt1	96	68.966	ENSANAG00000024802	TRNT1	94	68.966	Aotus_nancymaae
ENSGAFG00000008647	trnt1	100	81.733	ENSACLG00000022227	trnt1	100	81.733	Astatotilapia_calliptera
ENSGAFG00000008647	trnt1	99	77.336	ENSAMXG00000003960	trnt1	99	77.336	Astyanax_mexicanus
ENSGAFG00000008647	trnt1	99	65.721	ENSBTAG00000019534	TRNT1	96	65.721	Bos_taurus
ENSGAFG00000008647	trnt1	95	43.826	WBGene00010089	hpo-31	94	43.826	Caenorhabditis_elegans
ENSGAFG00000008647	trnt1	96	69.212	ENSCJAG00000015466	TRNT1	94	69.212	Callithrix_jacchus
ENSGAFG00000008647	trnt1	96	68.966	ENSCAFG00000005985	TRNT1	93	68.966	Canis_familiaris
ENSGAFG00000008647	trnt1	96	68.966	ENSCAFG00020014746	TRNT1	93	68.966	Canis_lupus_dingo
ENSGAFG00000008647	trnt1	99	66.667	ENSCHIG00000007030	TRNT1	95	66.667	Capra_hircus
ENSGAFG00000008647	trnt1	96	70.197	ENSTSYG00000013390	TRNT1	94	70.197	Carlito_syrichta
ENSGAFG00000008647	trnt1	88	55.053	ENSCAPG00000006891	TRNT1	99	54.787	Cavia_aperea
ENSGAFG00000008647	trnt1	99	65.957	ENSCPOG00000007849	TRNT1	96	65.957	Cavia_porcellus
ENSGAFG00000008647	trnt1	93	69.444	ENSCCAG00000002919	TRNT1	96	70.130	Cebus_capucinus
ENSGAFG00000008647	trnt1	96	69.951	ENSCATG00000031985	TRNT1	92	69.951	Cercocebus_atys
ENSGAFG00000008647	trnt1	96	68.382	ENSCLAG00000005186	TRNT1	84	79.330	Chinchilla_lanigera
ENSGAFG00000008647	trnt1	96	69.951	ENSCSAG00000011052	TRNT1	94	69.951	Chlorocebus_sabaeus
ENSGAFG00000008647	trnt1	80	79.545	ENSCHOG00000005712	TRNT1	78	79.545	Choloepus_hoffmanni
ENSGAFG00000008647	trnt1	96	70.588	ENSCPBG00000017636	TRNT1	93	70.588	Chrysemys_picta_bellii
ENSGAFG00000008647	trnt1	95	40.494	ENSCING00000007069	-	99	40.494	Ciona_intestinalis
ENSGAFG00000008647	trnt1	95	41.872	ENSCSAVG00000007494	-	95	41.872	Ciona_savignyi
ENSGAFG00000008647	trnt1	96	70.197	ENSCANG00000039030	TRNT1	94	70.197	Colobus_angolensis_palliatus
ENSGAFG00000008647	trnt1	96	69.608	ENSCGRG00001009998	Trnt1	94	69.608	Cricetulus_griseus_chok1gshd
ENSGAFG00000008647	trnt1	96	69.608	ENSCGRG00000013410	Trnt1	86	79.121	Cricetulus_griseus_crigri
ENSGAFG00000008647	trnt1	100	80.047	ENSCSEG00000008157	trnt1	100	80.047	Cynoglossus_semilaevis
ENSGAFG00000008647	trnt1	99	87.736	ENSCVAG00000019770	trnt1	99	87.736	Cyprinodon_variegatus
ENSGAFG00000008647	trnt1	99	78.169	ENSDARG00000075297	trnt1	99	78.169	Danio_rerio
ENSGAFG00000008647	trnt1	96	70.833	ENSDNOG00000008837	TRNT1	94	70.833	Dasypus_novemcinctus
ENSGAFG00000008647	trnt1	96	68.873	ENSDORG00000014035	Trnt1	94	68.873	Dipodomys_ordii
ENSGAFG00000008647	trnt1	94	49.010	FBgn0037369	CG2100	83	49.010	Drosophila_melanogaster
ENSGAFG00000008647	trnt1	57	74.274	ENSETEG00000018177	TRNT1	97	74.274	Echinops_telfairi
ENSGAFG00000008647	trnt1	99	61.939	ENSEBUG00000012779	-	99	61.939	Eptatretus_burgeri
ENSGAFG00000008647	trnt1	96	70.197	ENSEASG00005003577	TRNT1	94	70.197	Equus_asinus_asinus
ENSGAFG00000008647	trnt1	96	70.443	ENSECAG00000014420	TRNT1	94	70.443	Equus_caballus
ENSGAFG00000008647	trnt1	99	67.849	ENSEEUG00000009567	TRNT1	97	67.849	Erinaceus_europaeus
ENSGAFG00000008647	trnt1	99	79.391	ENSELUG00000003802	trnt1	99	79.391	Esox_lucius
ENSGAFG00000008647	trnt1	96	68.966	ENSFCAG00000026805	TRNT1	93	68.966	Felis_catus
ENSGAFG00000008647	trnt1	90	71.802	ENSFALG00000013539	TRNT1	99	71.802	Ficedula_albicollis
ENSGAFG00000008647	trnt1	99	66.194	ENSFDAG00000018412	TRNT1	96	66.194	Fukomys_damarensis
ENSGAFG00000008647	trnt1	99	88.443	ENSFHEG00000019294	trnt1	99	88.443	Fundulus_heteroclitus
ENSGAFG00000008647	trnt1	99	78.638	ENSGMOG00000007460	trnt1	100	78.638	Gadus_morhua
ENSGAFG00000008647	trnt1	99	67.299	ENSGALG00000017368	TRNT1	97	67.299	Gallus_gallus
ENSGAFG00000008647	trnt1	99	82.864	ENSGACG00000011903	trnt1	99	82.864	Gasterosteus_aculeatus
ENSGAFG00000008647	trnt1	96	71.814	ENSGAGG00000020942	TRNT1	93	71.814	Gopherus_agassizii
ENSGAFG00000008647	trnt1	96	69.704	ENSGGOG00000015286	TRNT1	94	69.704	Gorilla_gorilla
ENSGAFG00000008647	trnt1	100	81.967	ENSHBUG00000002797	trnt1	100	81.967	Haplochromis_burtoni
ENSGAFG00000008647	trnt1	99	62.028	ENSHGLG00000000221	-	96	62.028	Heterocephalus_glaber_female
ENSGAFG00000008647	trnt1	96	68.137	ENSHGLG00000003649	TRNT1	94	68.137	Heterocephalus_glaber_female
ENSGAFG00000008647	trnt1	96	67.157	ENSHGLG00100016421	TRNT1	94	67.157	Heterocephalus_glaber_male
ENSGAFG00000008647	trnt1	99	77.230	ENSHCOG00000010618	trnt1	99	77.230	Hippocampus_comes
ENSGAFG00000008647	trnt1	99	76.402	ENSIPUG00000000971	trnt1	99	76.402	Ictalurus_punctatus
ENSGAFG00000008647	trnt1	96	69.608	ENSSTOG00000000150	TRNT1	86	79.888	Ictidomys_tridecemlineatus
ENSGAFG00000008647	trnt1	99	67.606	ENSJJAG00000018561	Trnt1	98	67.606	Jaculus_jaculus
ENSGAFG00000008647	trnt1	100	84.272	ENSKMAG00000011307	trnt1	100	84.272	Kryptolebias_marmoratus
ENSGAFG00000008647	trnt1	96	77.129	ENSLBEG00000019457	trnt1	97	77.129	Labrus_bergylta
ENSGAFG00000008647	trnt1	98	70.361	ENSLACG00000013227	TRNT1	96	70.361	Latimeria_chalumnae
ENSGAFG00000008647	trnt1	99	73.193	ENSLOCG00000011105	trnt1	98	73.193	Lepisosteus_oculatus
ENSGAFG00000008647	trnt1	96	69.704	ENSLAFG00000023191	TRNT1	94	69.704	Loxodonta_africana
ENSGAFG00000008647	trnt1	96	69.951	ENSMFAG00000045113	TRNT1	92	69.951	Macaca_fascicularis
ENSGAFG00000008647	trnt1	96	69.951	ENSMMUG00000017983	TRNT1	92	69.951	Macaca_mulatta
ENSGAFG00000008647	trnt1	96	69.951	ENSMNEG00000037805	TRNT1	92	69.951	Macaca_nemestrina
ENSGAFG00000008647	trnt1	90	70.681	ENSMLEG00000033671	TRNT1	99	70.681	Mandrillus_leucophaeus
ENSGAFG00000008647	trnt1	99	83.333	ENSMAMG00000023401	trnt1	99	83.333	Mastacembelus_armatus
ENSGAFG00000008647	trnt1	100	81.733	ENSMZEG00005009141	trnt1	100	81.733	Maylandia_zebra
ENSGAFG00000008647	trnt1	75	68.025	ENSMGAG00000009971	TRNT1	99	68.025	Meleagris_gallopavo
ENSGAFG00000008647	trnt1	96	69.363	ENSMAUG00000020707	Trnt1	94	69.363	Mesocricetus_auratus
ENSGAFG00000008647	trnt1	96	69.608	ENSMICG00000016615	TRNT1	94	69.608	Microcebus_murinus
ENSGAFG00000008647	trnt1	96	69.118	ENSMOCG00000004539	Trnt1	94	69.118	Microtus_ochrogaster
ENSGAFG00000008647	trnt1	99	79.953	ENSMMOG00000010742	trnt1	99	79.953	Mola_mola
ENSGAFG00000008647	trnt1	96	69.118	ENSMODG00000004368	TRNT1	94	69.118	Monodelphis_domestica
ENSGAFG00000008647	trnt1	99	80.516	ENSMALG00000008376	trnt1	99	80.516	Monopterus_albus
ENSGAFG00000008647	trnt1	96	68.873	MGP_CAROLIEiJ_G0028698	Trnt1	90	74.180	Mus_caroli
ENSGAFG00000008647	trnt1	96	68.627	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSGAFG00000008647	trnt1	96	70.098	MGP_PahariEiJ_G0022449	Trnt1	88	81.564	Mus_pahari
ENSGAFG00000008647	trnt1	96	68.873	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSGAFG00000008647	trnt1	96	68.719	ENSMPUG00000017017	TRNT1	93	68.719	Mustela_putorius_furo
ENSGAFG00000008647	trnt1	90	70.312	ENSMLUG00000011864	TRNT1	99	70.312	Myotis_lucifugus
ENSGAFG00000008647	trnt1	96	68.382	ENSNGAG00000000537	Trnt1	94	68.382	Nannospalax_galili
ENSGAFG00000008647	trnt1	81	81.792	ENSNBRG00000023606	trnt1	99	81.792	Neolamprologus_brichardi
ENSGAFG00000008647	trnt1	96	69.951	ENSNLEG00000003226	TRNT1	94	69.951	Nomascus_leucogenys
ENSGAFG00000008647	trnt1	96	68.873	ENSMEUG00000004684	TRNT1	94	68.873	Notamacropus_eugenii
ENSGAFG00000008647	trnt1	90	66.230	ENSOPRG00000015067	TRNT1	99	66.230	Ochotona_princeps
ENSGAFG00000008647	trnt1	99	66.903	ENSODEG00000007597	TRNT1	96	66.903	Octodon_degus
ENSGAFG00000008647	trnt1	99	82.864	ENSONIG00000020273	trnt1	98	82.864	Oreochromis_niloticus
ENSGAFG00000008647	trnt1	98	64.455	ENSOANG00000007514	TRNT1	97	64.455	Ornithorhynchus_anatinus
ENSGAFG00000008647	trnt1	98	66.507	ENSOCUG00000008580	TRNT1	97	66.507	Oryctolagus_cuniculus
ENSGAFG00000008647	trnt1	100	79.720	ENSORLG00000003165	trnt1	100	79.720	Oryzias_latipes
ENSGAFG00000008647	trnt1	100	80.186	ENSORLG00020022060	trnt1	100	80.186	Oryzias_latipes_hni
ENSGAFG00000008647	trnt1	100	79.953	ENSORLG00015018915	trnt1	99	79.953	Oryzias_latipes_hsok
ENSGAFG00000008647	trnt1	100	76.941	ENSOMEG00000003331	trnt1	100	76.941	Oryzias_melastigma
ENSGAFG00000008647	trnt1	99	66.667	ENSOARG00000008631	TRNT1	95	66.667	Ovis_aries
ENSGAFG00000008647	trnt1	96	69.458	ENSPPAG00000043566	TRNT1	94	69.458	Pan_paniscus
ENSGAFG00000008647	trnt1	96	68.719	ENSPPRG00000001327	TRNT1	93	68.719	Panthera_pardus
ENSGAFG00000008647	trnt1	96	68.719	ENSPTIG00000011448	TRNT1	93	68.719	Panthera_tigris_altaica
ENSGAFG00000008647	trnt1	96	69.458	ENSPTRG00000014564	TRNT1	94	69.458	Pan_troglodytes
ENSGAFG00000008647	trnt1	96	69.951	ENSPANG00000025944	TRNT1	92	69.951	Papio_anubis
ENSGAFG00000008647	trnt1	99	75.935	ENSPKIG00000020015	trnt1	99	75.935	Paramormyrops_kingsleyae
ENSGAFG00000008647	trnt1	93	71.392	ENSPSIG00000017356	TRNT1	99	71.667	Pelodiscus_sinensis
ENSGAFG00000008647	trnt1	99	78.638	ENSPMGG00000008888	trnt1	98	78.638	Periophthalmus_magnuspinnatus
ENSGAFG00000008647	trnt1	96	69.363	ENSPEMG00000019845	Trnt1	94	69.363	Peromyscus_maniculatus_bairdii
ENSGAFG00000008647	trnt1	96	69.363	ENSPCIG00000030436	TRNT1	94	69.363	Phascolarctos_cinereus
ENSGAFG00000008647	trnt1	99	96.445	ENSPFOG00000006194	trnt1	99	96.445	Poecilia_formosa
ENSGAFG00000008647	trnt1	99	96.209	ENSPLAG00000015623	trnt1	100	96.535	Poecilia_latipinna
ENSGAFG00000008647	trnt1	100	96.235	ENSPMEG00000012216	trnt1	100	96.287	Poecilia_mexicana
ENSGAFG00000008647	trnt1	100	95.765	ENSPREG00000021470	trnt1	100	95.765	Poecilia_reticulata
ENSGAFG00000008647	trnt1	96	69.118	ENSPPYG00000013702	TRNT1	94	69.118	Pongo_abelii
ENSGAFG00000008647	trnt1	90	70.681	ENSPCAG00000001951	TRNT1	99	70.681	Procavia_capensis
ENSGAFG00000008647	trnt1	96	69.458	ENSPCOG00000022228	TRNT1	94	69.458	Propithecus_coquereli
ENSGAFG00000008647	trnt1	90	69.634	ENSPVAG00000008784	TRNT1	99	69.634	Pteropus_vampyrus
ENSGAFG00000008647	trnt1	100	81.499	ENSPNYG00000003120	trnt1	100	81.499	Pundamilia_nyererei
ENSGAFG00000008647	trnt1	99	78.271	ENSPNAG00000000565	trnt1	99	78.271	Pygocentrus_nattereri
ENSGAFG00000008647	trnt1	96	69.853	ENSRNOG00000006432	Trnt1	94	69.853	Rattus_norvegicus
ENSGAFG00000008647	trnt1	96	68.966	ENSRBIG00000042632	TRNT1	93	68.966	Rhinopithecus_bieti
ENSGAFG00000008647	trnt1	96	69.951	ENSRROG00000036866	TRNT1	94	69.951	Rhinopithecus_roxellana
ENSGAFG00000008647	trnt1	96	69.212	ENSSBOG00000021208	TRNT1	94	69.212	Saimiri_boliviensis_boliviensis
ENSGAFG00000008647	trnt1	96	68.473	ENSSHAG00000018861	TRNT1	94	68.473	Sarcophilus_harrisii
ENSGAFG00000008647	trnt1	99	75.291	ENSSFOG00015020844	trnt1	99	75.291	Scleropages_formosus
ENSGAFG00000008647	trnt1	99	82.864	ENSSMAG00000015432	trnt1	98	82.864	Scophthalmus_maximus
ENSGAFG00000008647	trnt1	99	83.803	ENSSDUG00000012320	trnt1	100	83.803	Seriola_dumerili
ENSGAFG00000008647	trnt1	99	83.568	ENSSLDG00000009325	trnt1	100	83.568	Seriola_lalandi_dorsalis
ENSGAFG00000008647	trnt1	57	82.573	ENSSLDG00000016463	-	91	82.845	Seriola_lalandi_dorsalis
ENSGAFG00000008647	trnt1	90	71.204	ENSSPUG00000014153	TRNT1	99	71.204	Sphenodon_punctatus
ENSGAFG00000008647	trnt1	99	82.629	ENSSPAG00000021005	trnt1	99	82.629	Stegastes_partitus
ENSGAFG00000008647	trnt1	99	67.139	ENSSSCG00000011529	TRNT1	96	67.139	Sus_scrofa
ENSGAFG00000008647	trnt1	95	71.040	ENSTGUG00000010192	TRNT1	99	71.040	Taeniopygia_guttata
ENSGAFG00000008647	trnt1	99	80.047	ENSTRUG00000001088	trnt1	99	80.047	Takifugu_rubripes
ENSGAFG00000008647	trnt1	99	80.047	ENSTNIG00000007363	trnt1	98	80.047	Tetraodon_nigroviridis
ENSGAFG00000008647	trnt1	61	58.077	ENSTBEG00000006367	TRNT1	86	58.077	Tupaia_belangeri
ENSGAFG00000008647	trnt1	99	66.194	ENSTTRG00000007803	TRNT1	96	66.194	Tursiops_truncatus
ENSGAFG00000008647	trnt1	96	68.966	ENSUAMG00000022574	TRNT1	93	68.966	Ursus_americanus
ENSGAFG00000008647	trnt1	96	68.719	ENSUMAG00000024092	TRNT1	93	68.719	Ursus_maritimus
ENSGAFG00000008647	trnt1	96	68.966	ENSVVUG00000012810	TRNT1	93	68.966	Vulpes_vulpes
ENSGAFG00000008647	trnt1	96	62.347	ENSXETG00000025091	trnt1	99	62.438	Xenopus_tropicalis
ENSGAFG00000008647	trnt1	100	96.235	ENSXCOG00000010150	trnt1	100	96.235	Xiphophorus_couchianus
ENSGAFG00000008647	trnt1	100	96.941	ENSXMAG00000002227	trnt1	100	96.941	Xiphophorus_maculatus