EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000008827 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 14692 bases
Position: chrNHOQ01000158.1:2358844-2373535
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013167	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013303	-	4584	-	ENSGAFP00000013167	1527 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000008827	-	88	86.117	ENSGAFG00000014900	smarca4a	96	85.683
ENSGAFG00000008827	-	94	68.783	ENSGAFG00000001164	SMARCA2	92	84.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008827	-	98	82.217	ENSG00000127616	SMARCA4	94	97.260	Homo_sapiens
ENSGAFG00000008827	-	94	85.714	ENSAPOG00000004542	SMARCA4	99	91.124	Acanthochromis_polyacanthus
ENSGAFG00000008827	-	78	85.945	ENSAPOG00000003509	smarca4a	98	85.427	Acanthochromis_polyacanthus
ENSGAFG00000008827	-	98	79.096	ENSAMEG00000010868	SMARCA4	99	78.700	Ailuropoda_melanoleuca
ENSGAFG00000008827	-	94	89.933	ENSACIG00000003035	-	97	90.214	Amphilophus_citrinellus
ENSGAFG00000008827	-	98	82.287	ENSACIG00000021550	smarca4a	98	82.316	Amphilophus_citrinellus
ENSGAFG00000008827	-	93	88.301	ENSAOCG00000009450	-	97	89.523	Amphiprion_ocellaris
ENSGAFG00000008827	-	88	84.244	ENSAOCG00000019167	smarca4a	100	83.866	Amphiprion_ocellaris
ENSGAFG00000008827	-	88	84.315	ENSAPEG00000015559	smarca4a	100	83.937	Amphiprion_percula
ENSGAFG00000008827	-	99	91.397	ENSAPEG00000023108	-	99	92.532	Amphiprion_percula
ENSGAFG00000008827	-	95	89.391	ENSATEG00000011524	smarca4a	99	81.447	Anabas_testudineus
ENSGAFG00000008827	-	98	90.557	ENSATEG00000001094	-	99	90.754	Anabas_testudineus
ENSGAFG00000008827	-	98	81.989	ENSANAG00000036991	SMARCA4	99	78.954	Aotus_nancymaae
ENSGAFG00000008827	-	98	83.239	ENSACLG00000000163	smarca4a	98	83.702	Astatotilapia_calliptera
ENSGAFG00000008827	-	94	90.033	ENSACLG00000008638	-	98	90.301	Astatotilapia_calliptera
ENSGAFG00000008827	-	93	84.287	ENSAMXG00000011238	-	99	86.237	Astyanax_mexicanus
ENSGAFG00000008827	-	97	84.324	ENSAMXG00000021023	smarca4a	99	83.984	Astyanax_mexicanus
ENSGAFG00000008827	-	98	82.018	ENSBTAG00000019220	SMARCA4	99	82.206	Bos_taurus
ENSGAFG00000008827	-	95	83.839	ENSCJAG00000005936	SMARCA4	94	84.661	Callithrix_jacchus
ENSGAFG00000008827	-	98	82.091	ENSCAFG00000017584	SMARCA4	99	81.989	Canis_familiaris
ENSGAFG00000008827	-	98	82.091	ENSCAFG00020024620	SMARCA4	96	84.682	Canis_lupus_dingo
ENSGAFG00000008827	-	98	78.285	ENSCHIG00000015318	SMARCA4	99	78.598	Capra_hircus
ENSGAFG00000008827	-	98	82.029	ENSTSYG00000012966	SMARCA4	99	82.456	Carlito_syrichta
ENSGAFG00000008827	-	93	80.232	ENSCAPG00000015932	SMARCA4	79	87.663	Cavia_aperea
ENSGAFG00000008827	-	98	82.091	ENSCPOG00000015549	SMARCA4	99	81.926	Cavia_porcellus
ENSGAFG00000008827	-	98	79.315	ENSCCAG00000031660	SMARCA4	98	79.216	Cebus_capucinus
ENSGAFG00000008827	-	98	82.217	ENSCATG00000029530	SMARCA4	99	82.051	Cercocebus_atys
ENSGAFG00000008827	-	98	82.390	ENSCLAG00000011946	SMARCA4	99	82.830	Chinchilla_lanigera
ENSGAFG00000008827	-	98	82.364	ENSCPBG00000009994	SMARCA4	99	81.852	Chrysemys_picta_bellii
ENSGAFG00000008827	-	98	82.154	ENSCANG00000036013	SMARCA4	99	82.051	Colobus_angolensis_palliatus
ENSGAFG00000008827	-	98	81.966	ENSCGRG00001016732	Smarca4	99	81.676	Cricetulus_griseus_chok1gshd
ENSGAFG00000008827	-	98	81.966	ENSCGRG00000017242	Smarca4	99	81.676	Cricetulus_griseus_crigri
ENSGAFG00000008827	-	94	80.992	ENSCSEG00000014771	smarca4a	99	80.881	Cynoglossus_semilaevis
ENSGAFG00000008827	-	98	80.498	ENSCVAG00000006979	smarca4a	99	80.311	Cyprinodon_variegatus
ENSGAFG00000008827	-	98	89.008	ENSCVAG00000003018	-	98	89.949	Cyprinodon_variegatus
ENSGAFG00000008827	-	91	81.170	ENSDARG00000104339	SMARCA4	94	81.279	Danio_rerio
ENSGAFG00000008827	-	97	82.622	ENSDARG00000077226	smarca4a	99	81.312	Danio_rerio
ENSGAFG00000008827	-	96	81.062	ENSDNOG00000048847	SMARCA4	90	86.674	Dasypus_novemcinctus
ENSGAFG00000008827	-	84	76.788	ENSDORG00000002544	Smarca4	91	77.350	Dipodomys_ordii
ENSGAFG00000008827	-	93	71.207	ENSETEG00000013361	SMARCA4	94	71.078	Echinops_telfairi
ENSGAFG00000008827	-	98	82.841	ENSEASG00005006167	SMARCA4	99	82.259	Equus_asinus_asinus
ENSGAFG00000008827	-	98	82.091	ENSECAG00000008334	SMARCA4	99	81.926	Equus_caballus
ENSGAFG00000008827	-	98	83.696	ENSELUG00000010247	smarca4a	98	82.606	Esox_lucius
ENSGAFG00000008827	-	98	83.377	ENSELUG00000023232	-	94	83.333	Esox_lucius
ENSGAFG00000008827	-	98	82.062	ENSFCAG00000004894	SMARCA4	99	81.835	Felis_catus
ENSGAFG00000008827	-	91	79.837	ENSFALG00000004208	SMARCA4	95	79.568	Ficedula_albicollis
ENSGAFG00000008827	-	91	81.996	ENSFDAG00000012237	SMARCA4	97	82.198	Fukomys_damarensis
ENSGAFG00000008827	-	94	79.579	ENSFHEG00000010182	smarca4a	99	81.046	Fundulus_heteroclitus
ENSGAFG00000008827	-	100	91.667	ENSFHEG00000007902	-	99	93.325	Fundulus_heteroclitus
ENSGAFG00000008827	-	88	81.235	ENSGMOG00000002649	smarca4a	88	81.026	Gadus_morhua
ENSGAFG00000008827	-	84	83.333	ENSGMOG00000005756	-	82	85.185	Gadus_morhua
ENSGAFG00000008827	-	71	80.203	ENSGALG00000047145	SMARCA4	100	80.017	Gallus_gallus
ENSGAFG00000008827	-	94	80.333	ENSGACG00000006691	smarca4a	99	79.703	Gasterosteus_aculeatus
ENSGAFG00000008827	-	98	81.416	ENSGACG00000016033	-	99	81.261	Gasterosteus_aculeatus
ENSGAFG00000008827	-	98	82.456	ENSGAGG00000016757	SMARCA4	99	81.944	Gopherus_agassizii
ENSGAFG00000008827	-	98	82.217	ENSGGOG00000009882	SMARCA4	99	82.051	Gorilla_gorilla
ENSGAFG00000008827	-	98	83.176	ENSHBUG00000021172	smarca4a	99	82.236	Haplochromis_burtoni
ENSGAFG00000008827	-	98	86.325	ENSHBUG00000005447	-	98	90.569	Haplochromis_burtoni
ENSGAFG00000008827	-	98	81.733	ENSHGLG00000010519	SMARCA4	99	81.858	Heterocephalus_glaber_female
ENSGAFG00000008827	-	98	81.625	ENSHGLG00100013774	SMARCA4	99	81.574	Heterocephalus_glaber_male
ENSGAFG00000008827	-	94	81.713	ENSHCOG00000009510	smarca4a	96	81.427	Hippocampus_comes
ENSGAFG00000008827	-	98	82.061	ENSIPUG00000006107	smarca4a	97	84.507	Ictalurus_punctatus
ENSGAFG00000008827	-	96	83.398	ENSIPUG00000016346	-	95	84.520	Ictalurus_punctatus
ENSGAFG00000008827	-	98	82.154	ENSSTOG00000007939	SMARCA4	99	81.926	Ictidomys_tridecemlineatus
ENSGAFG00000008827	-	98	80.368	ENSJJAG00000012877	Smarca4	99	80.208	Jaculus_jaculus
ENSGAFG00000008827	-	98	86.938	ENSKMAG00000019518	-	98	89.967	Kryptolebias_marmoratus
ENSGAFG00000008827	-	98	82.952	ENSKMAG00000011931	smarca4a	98	83.099	Kryptolebias_marmoratus
ENSGAFG00000008827	-	94	80.772	ENSLBEG00000017383	smarca4a	97	80.223	Labrus_bergylta
ENSGAFG00000008827	-	96	85.097	ENSLBEG00000020655	-	99	85.097	Labrus_bergylta
ENSGAFG00000008827	-	98	79.962	ENSLOCG00000007820	smarca4a	99	79.811	Lepisosteus_oculatus
ENSGAFG00000008827	-	98	82.000	ENSLAFG00000001433	SMARCA4	99	81.773	Loxodonta_africana
ENSGAFG00000008827	-	98	82.217	ENSMFAG00000032146	SMARCA4	98	82.051	Macaca_fascicularis
ENSGAFG00000008827	-	98	82.217	ENSMMUG00000012042	SMARCA4	97	89.858	Macaca_mulatta
ENSGAFG00000008827	-	98	82.080	ENSMNEG00000028512	SMARCA4	99	82.268	Macaca_nemestrina
ENSGAFG00000008827	-	98	81.989	ENSMLEG00000034976	SMARCA4	99	81.960	Mandrillus_leucophaeus
ENSGAFG00000008827	-	98	85.835	ENSMAMG00000002841	-	98	89.567	Mastacembelus_armatus
ENSGAFG00000008827	-	98	84.100	ENSMAMG00000009256	smarca4a	98	82.353	Mastacembelus_armatus
ENSGAFG00000008827	-	98	83.239	ENSMZEG00005003889	smarca4a	98	83.702	Maylandia_zebra
ENSGAFG00000008827	-	93	88.533	ENSMZEG00005023861	-	98	86.629	Maylandia_zebra
ENSGAFG00000008827	-	98	81.938	ENSMAUG00000020731	Smarca4	99	81.586	Mesocricetus_auratus
ENSGAFG00000008827	-	98	82.022	ENSMICG00000009806	SMARCA4	99	81.796	Microcebus_murinus
ENSGAFG00000008827	-	98	81.688	ENSMOCG00000022209	Smarca4	99	81.398	Microtus_ochrogaster
ENSGAFG00000008827	-	99	91.415	ENSMMOG00000008466	-	98	91.178	Mola_mola
ENSGAFG00000008827	-	94	80.116	ENSMMOG00000007571	smarca4a	98	80.051	Mola_mola
ENSGAFG00000008827	-	98	80.885	ENSMODG00000006287	SMARCA4	99	80.417	Monodelphis_domestica
ENSGAFG00000008827	-	94	82.560	ENSMALG00000003388	smarca4a	98	82.327	Monopterus_albus
ENSGAFG00000008827	-	88	89.522	ENSMALG00000021534	-	99	89.736	Monopterus_albus
ENSGAFG00000008827	-	98	81.841	MGP_CAROLIEiJ_G0031879	Smarca4	100	81.289	Mus_caroli
ENSGAFG00000008827	-	98	81.841	ENSMUSG00000032187	Smarca4	99	81.551	Mus_musculus
ENSGAFG00000008827	-	98	81.830	MGP_PahariEiJ_G0014745	Smarca4	100	81.560	Mus_pahari
ENSGAFG00000008827	-	98	81.841	MGP_SPRETEiJ_G0033003	Smarca4	100	81.289	Mus_spretus
ENSGAFG00000008827	-	98	82.091	ENSMPUG00000005711	SMARCA4	99	81.926	Mustela_putorius_furo
ENSGAFG00000008827	-	98	82.091	ENSMLUG00000004491	-	99	81.989	Myotis_lucifugus
ENSGAFG00000008827	-	98	81.516	ENSNGAG00000021852	Smarca4	99	81.767	Nannospalax_galili
ENSGAFG00000008827	-	94	85.057	ENSNBRG00000011457	smarca4a	96	85.160	Neolamprologus_brichardi
ENSGAFG00000008827	-	88	89.886	ENSNBRG00000018865	-	99	90.171	Neolamprologus_brichardi
ENSGAFG00000008827	-	95	79.156	ENSNLEG00000012389	SMARCA4	96	76.463	Nomascus_leucogenys
ENSGAFG00000008827	-	80	93.103	ENSOPRG00000000885	-	76	93.103	Ochotona_princeps
ENSGAFG00000008827	-	98	82.850	ENSODEG00000017127	SMARCA4	99	82.702	Octodon_degus
ENSGAFG00000008827	-	98	83.040	ENSONIG00000008196	smarca4a	99	83.239	Oreochromis_niloticus
ENSGAFG00000008827	-	98	86.447	ENSONIG00000018040	-	99	87.126	Oreochromis_niloticus
ENSGAFG00000008827	-	97	76.943	ENSOCUG00000001787	SMARCA4	98	76.928	Oryctolagus_cuniculus
ENSGAFG00000008827	-	98	85.144	ENSORLG00000003955	-	98	90.109	Oryzias_latipes
ENSGAFG00000008827	-	94	81.254	ENSORLG00000015452	smarca4a	99	80.994	Oryzias_latipes
ENSGAFG00000008827	-	98	85.340	ENSORLG00020009728	-	98	90.138	Oryzias_latipes_hni
ENSGAFG00000008827	-	94	81.113	ENSORLG00020004611	smarca4a	99	82.820	Oryzias_latipes_hni
ENSGAFG00000008827	-	94	81.048	ENSORLG00015016560	smarca4a	99	81.056	Oryzias_latipes_hsok
ENSGAFG00000008827	-	99	85.429	ENSORLG00015007739	-	98	86.749	Oryzias_latipes_hsok
ENSGAFG00000008827	-	98	85.527	ENSOMEG00000016626	-	99	86.076	Oryzias_melastigma
ENSGAFG00000008827	-	98	81.773	ENSOMEG00000007486	smarca4a	99	81.581	Oryzias_melastigma
ENSGAFG00000008827	-	88	80.870	ENSOGAG00000016148	SMARCA4	100	80.870	Otolemur_garnettii
ENSGAFG00000008827	-	98	81.328	ENSOARG00000017454	SMARCA4	98	82.274	Ovis_aries
ENSGAFG00000008827	-	98	82.217	ENSPPAG00000043191	SMARCA4	99	82.051	Pan_paniscus
ENSGAFG00000008827	-	98	82.062	ENSPPRG00000000064	SMARCA4	99	81.835	Panthera_pardus
ENSGAFG00000008827	-	81	82.938	ENSPTIG00000017447	SMARCA4	99	77.730	Panthera_tigris_altaica
ENSGAFG00000008827	-	98	82.217	ENSPTRG00000010488	SMARCA4	99	82.051	Pan_troglodytes
ENSGAFG00000008827	-	98	82.206	ENSPANG00000011042	SMARCA4	98	82.393	Papio_anubis
ENSGAFG00000008827	-	94	83.486	ENSPKIG00000010087	-	96	82.707	Paramormyrops_kingsleyae
ENSGAFG00000008827	-	98	85.975	ENSPKIG00000007770	SMARCA4	98	85.323	Paramormyrops_kingsleyae
ENSGAFG00000008827	-	98	77.534	ENSPSIG00000005547	SMARCA4	99	78.928	Pelodiscus_sinensis
ENSGAFG00000008827	-	98	81.750	ENSPEMG00000020389	Smarca4	99	81.461	Peromyscus_maniculatus_bairdii
ENSGAFG00000008827	-	98	82.257	ENSPCIG00000017138	SMARCA4	99	81.966	Phascolarctos_cinereus
ENSGAFG00000008827	-	84	85.973	ENSPFOG00000007892	smarca4a	99	79.494	Poecilia_formosa
ENSGAFG00000008827	-	98	88.578	ENSPFOG00000012930	-	99	89.605	Poecilia_formosa
ENSGAFG00000008827	-	98	82.803	ENSPLAG00000014294	smarca4a	99	82.094	Poecilia_latipinna
ENSGAFG00000008827	-	99	92.839	ENSPLAG00000018616	-	99	92.777	Poecilia_latipinna
ENSGAFG00000008827	-	99	95.070	ENSPMEG00000008929	-	99	95.070	Poecilia_mexicana
ENSGAFG00000008827	-	98	80.051	ENSPMEG00000003725	smarca4a	99	80.541	Poecilia_mexicana
ENSGAFG00000008827	-	99	94.351	ENSPREG00000014823	-	99	94.351	Poecilia_reticulata
ENSGAFG00000008827	-	98	80.813	ENSPREG00000014608	smarca4a	99	80.925	Poecilia_reticulata
ENSGAFG00000008827	-	98	80.736	ENSPPYG00000009568	SMARCA4	99	80.798	Pongo_abelii
ENSGAFG00000008827	-	78	82.119	ENSPCAG00000014054	SMARCA4	77	81.457	Procavia_capensis
ENSGAFG00000008827	-	98	82.114	ENSPCOG00000023011	SMARCA4	99	81.733	Propithecus_coquereli
ENSGAFG00000008827	-	93	75.330	ENSPVAG00000007787	SMARCA4	94	73.734	Pteropus_vampyrus
ENSGAFG00000008827	-	98	84.958	ENSPNYG00000000717	smarca4a	95	85.123	Pundamilia_nyererei
ENSGAFG00000008827	-	94	90.547	ENSPNYG00000023995	-	98	89.946	Pundamilia_nyererei
ENSGAFG00000008827	-	97	82.944	ENSPNAG00000024136	smarca4a	98	83.002	Pygocentrus_nattereri
ENSGAFG00000008827	-	94	84.057	ENSPNAG00000006636	-	93	84.486	Pygocentrus_nattereri
ENSGAFG00000008827	-	98	81.841	ENSRNOG00000009271	Smarca4	99	81.551	Rattus_norvegicus
ENSGAFG00000008827	-	98	82.154	ENSRBIG00000038696	SMARCA4	98	81.989	Rhinopithecus_bieti
ENSGAFG00000008827	-	98	82.217	ENSRROG00000045509	SMARCA4	99	82.051	Rhinopithecus_roxellana
ENSGAFG00000008827	-	98	82.154	ENSSBOG00000026896	SMARCA4	99	82.051	Saimiri_boliviensis_boliviensis
ENSGAFG00000008827	-	98	82.132	ENSSHAG00000001642	SMARCA4	99	81.904	Sarcophilus_harrisii
ENSGAFG00000008827	-	92	87.706	ENSSFOG00015009921	-	90	89.016	Scleropages_formosus
ENSGAFG00000008827	-	98	85.577	ENSSFOG00015013823	smarca4	97	84.872	Scleropages_formosus
ENSGAFG00000008827	-	98	82.980	ENSSMAG00000014082	-	99	84.265	Scophthalmus_maximus
ENSGAFG00000008827	-	94	82.307	ENSSMAG00000003200	smarca4a	97	82.260	Scophthalmus_maximus
ENSGAFG00000008827	-	99	88.559	ENSSDUG00000005388	-	96	89.067	Seriola_dumerili
ENSGAFG00000008827	-	98	78.984	ENSSDUG00000017298	smarca4a	99	78.558	Seriola_dumerili
ENSGAFG00000008827	-	94	89.079	ENSSLDG00000023663	-	97	90.013	Seriola_lalandi_dorsalis
ENSGAFG00000008827	-	98	81.300	ENSSLDG00000024486	smarca4a	100	84.099	Seriola_lalandi_dorsalis
ENSGAFG00000008827	-	65	97.516	ENSSARG00000013477	SMARCA4	83	97.516	Sorex_araneus
ENSGAFG00000008827	-	94	79.223	ENSSPUG00000004558	SMARCA4	98	78.835	Sphenodon_punctatus
ENSGAFG00000008827	-	99	88.535	ENSSPAG00000012533	-	98	88.846	Stegastes_partitus
ENSGAFG00000008827	-	98	84.261	ENSSPAG00000004248	smarca4a	99	83.974	Stegastes_partitus
ENSGAFG00000008827	-	98	82.125	ENSSSCG00000013629	SMARCA4	99	81.898	Sus_scrofa
ENSGAFG00000008827	-	53	81.014	ENSTGUG00000015488	-	99	80.919	Taeniopygia_guttata
ENSGAFG00000008827	-	88	79.972	ENSTRUG00000004885	smarca4a	100	80.939	Takifugu_rubripes
ENSGAFG00000008827	-	94	86.039	ENSTRUG00000001378	SMARCA4	98	85.705	Takifugu_rubripes
ENSGAFG00000008827	-	72	81.206	ENSTNIG00000004859	-	99	82.624	Tetraodon_nigroviridis
ENSGAFG00000008827	-	98	84.658	ENSTNIG00000004536	SMARCA4	99	84.639	Tetraodon_nigroviridis
ENSGAFG00000008827	-	98	79.435	ENSTTRG00000009519	SMARCA4	99	79.190	Tursiops_truncatus
ENSGAFG00000008827	-	98	82.154	ENSUAMG00000014661	SMARCA4	99	81.989	Ursus_americanus
ENSGAFG00000008827	-	97	81.318	ENSUMAG00000022005	SMARCA4	97	87.972	Ursus_maritimus
ENSGAFG00000008827	-	98	82.091	ENSVVUG00000017820	SMARCA4	96	81.989	Vulpes_vulpes
ENSGAFG00000008827	-	98	77.675	ENSXETG00000009355	smarca4	99	77.819	Xenopus_tropicalis
ENSGAFG00000008827	-	99	91.619	ENSXCOG00000013494	-	99	92.190	Xiphophorus_couchianus
ENSGAFG00000008827	-	100	94.750	ENSXMAG00000007030	-	100	94.750	Xiphophorus_maculatus
ENSGAFG00000008827	-	88	82.788	ENSXMAG00000006321	smarca4a	100	82.232	Xiphophorus_maculatus