EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6146 bases
Position: chrNHOQ01001318.1:3334571-3340716
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013277	PRP38	PF03371.15	1.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013413	-	2511	-	ENSGAFP00000013277	463 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008943	-	100	84.086	ENSATEG00000014482	-	100	81.935	Anabas_testudineus
ENSGAFG00000008943	-	60	86.170	ENSAMXG00000039494	-	50	84.880	Astyanax_mexicanus
ENSGAFG00000008943	-	59	84.420	ENSBTAG00000047874	PRPF38B	85	61.297	Bos_taurus
ENSGAFG00000008943	-	58	46.468	WBGene00022434	Y108G3AL.2	61	53.266	Caenorhabditis_elegans
ENSGAFG00000008943	-	98	57.143	ENSCAFG00020010992	-	91	57.143	Canis_lupus_dingo
ENSGAFG00000008943	-	59	84.420	ENSCHIG00000024357	-	85	61.297	Capra_hircus
ENSGAFG00000008943	-	59	84.783	ENSCPOG00000039545	-	82	63.011	Cavia_porcellus
ENSGAFG00000008943	-	59	84.364	ENSCLAG00000005801	-	82	62.179	Chinchilla_lanigera
ENSGAFG00000008943	-	51	73.950	ENSCHOG00000008972	-	98	59.659	Choloepus_hoffmanni
ENSGAFG00000008943	-	100	78.755	ENSCSEG00000015030	-	100	77.682	Cynoglossus_semilaevis
ENSGAFG00000008943	-	59	82.545	ENSETEG00000014690	-	85	67.526	Echinops_telfairi
ENSGAFG00000008943	-	100	63.098	ENSELUG00000010390	-	97	69.290	Esox_lucius
ENSGAFG00000008943	-	99	76.160	ENSGMOG00000012080	-	99	75.949	Gadus_morhua
ENSGAFG00000008943	-	99	60.078	ENSGALG00000001972	-	92	61.614	Gallus_gallus
ENSGAFG00000008943	-	99	62.648	ENSGAGG00000001563	-	83	63.482	Gopherus_agassizii
ENSGAFG00000008943	-	59	85.401	ENSHGLG00000016583	PRPF38B	82	62.473	Heterocephalus_glaber_female
ENSGAFG00000008943	-	59	85.401	ENSHGLG00100015525	-	82	62.473	Heterocephalus_glaber_male
ENSGAFG00000008943	-	100	79.355	ENSHCOG00000001071	-	100	79.310	Hippocampus_comes
ENSGAFG00000008943	-	100	82.241	ENSKMAG00000005540	-	100	82.030	Kryptolebias_marmoratus
ENSGAFG00000008943	-	100	58.647	ENSLACG00000015511	-	76	66.019	Latimeria_chalumnae
ENSGAFG00000008943	-	59	84.727	ENSMOCG00000020285	-	82	62.017	Microtus_ochrogaster
ENSGAFG00000008943	-	100	82.479	ENSMMOG00000011639	-	100	79.399	Mola_mola
ENSGAFG00000008943	-	65	80.328	ENSMODG00000002350	-	87	84.307	Monodelphis_domestica
ENSGAFG00000008943	-	100	86.325	ENSMALG00000019479	-	100	83.226	Monopterus_albus
ENSGAFG00000008943	-	100	87.742	ENSONIG00000010129	-	100	85.161	Oreochromis_niloticus
ENSGAFG00000008943	-	86	64.524	ENSOANG00000007343	-	66	81.597	Ornithorhynchus_anatinus
ENSGAFG00000008943	-	100	82.328	ENSORLG00000015621	-	95	98.171	Oryzias_latipes
ENSGAFG00000008943	-	100	82.328	ENSORLG00020016276	-	94	98.171	Oryzias_latipes_hni
ENSGAFG00000008943	-	100	82.328	ENSORLG00015016270	-	100	81.466	Oryzias_latipes_hsok
ENSGAFG00000008943	-	100	83.405	ENSOMEG00000022050	-	97	97.590	Oryzias_melastigma
ENSGAFG00000008943	-	59	85.401	ENSOGAG00000027048	-	82	61.194	Otolemur_garnettii
ENSGAFG00000008943	-	57	86.364	ENSOARG00000018899	-	82	62.637	Ovis_aries
ENSGAFG00000008943	-	90	71.329	ENSPKIG00000004815	-	80	71.569	Paramormyrops_kingsleyae
ENSGAFG00000008943	-	100	69.330	ENSPKIG00000017291	-	84	65.458	Paramormyrops_kingsleyae
ENSGAFG00000008943	-	100	98.704	ENSPFOG00000004025	-	100	98.704	Poecilia_formosa
ENSGAFG00000008943	-	100	98.488	ENSPLAG00000019842	-	100	98.488	Poecilia_latipinna
ENSGAFG00000008943	-	100	98.488	ENSPMEG00000004807	-	97	98.488	Poecilia_mexicana
ENSGAFG00000008943	-	100	98.056	ENSPREG00000015599	-	100	98.056	Poecilia_reticulata
ENSGAFG00000008943	-	60	84.229	ENSPNAG00000017484	-	95	67.901	Pygocentrus_nattereri
ENSGAFG00000008943	-	59	85.036	ENSRNOG00000020438	Prpf38b	83	61.834	Rattus_norvegicus
ENSGAFG00000008943	-	94	68.090	ENSSFOG00015011251	-	85	89.024	Scleropages_formosus
ENSGAFG00000008943	-	100	84.402	ENSSLDG00000023487	-	89	95.122	Seriola_lalandi_dorsalis
ENSGAFG00000008943	-	99	79.095	ENSTRUG00000011765	-	100	78.233	Takifugu_rubripes
ENSGAFG00000008943	-	99	64.606	ENSTNIG00000015299	-	99	69.032	Tetraodon_nigroviridis
ENSGAFG00000008943	-	58	76.580	ENSTBEG00000007504	-	87	57.143	Tupaia_belangeri
ENSGAFG00000008943	-	59	85.401	ENSTTRG00000006479	-	85	61.088	Tursiops_truncatus
ENSGAFG00000008943	-	57	72.453	ENSVPAG00000005541	-	81	54.367	Vicugna_pacos
ENSGAFG00000008943	-	96	58.932	ENSXETG00000005260	prpf38b	88	61.571	Xenopus_tropicalis
ENSGAFG00000008943	-	100	98.920	ENSXCOG00000008329	-	100	98.920	Xiphophorus_couchianus
ENSGAFG00000008943	-	100	98.704	ENSXMAG00000023831	-	100	98.704	Xiphophorus_maculatus