EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000008975 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10596 bases
Position: chrNHOQ01002390.1:2658712-2669307
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013310	MBD	PF01429.19	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013446	-	3407	-	ENSGAFP00000013310	792 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000008975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000008975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000008975	mbd1b	50	34.857	ENSG00000141644	MBD1	75	54.545	Homo_sapiens
ENSGAFG00000008975	mbd1b	99	64.819	ENSAPOG00000012810	mbd1b	100	63.253	Acanthochromis_polyacanthus
ENSGAFG00000008975	mbd1b	91	71.711	ENSACIG00000010590	mbd1b	84	71.711	Amphilophus_citrinellus
ENSGAFG00000008975	mbd1b	99	66.143	ENSAOCG00000020272	mbd1b	100	64.536	Amphiprion_ocellaris
ENSGAFG00000008975	mbd1b	99	66.063	ENSAPEG00000023230	mbd1b	100	65.301	Amphiprion_percula
ENSGAFG00000008975	mbd1b	97	62.940	ENSATEG00000009608	mbd1b	98	61.361	Anabas_testudineus
ENSGAFG00000008975	mbd1b	50	37.640	ENSANAG00000036253	MBD1	65	32.319	Aotus_nancymaae
ENSGAFG00000008975	mbd1b	90	66.178	ENSACLG00000021383	mbd1b	89	65.200	Astatotilapia_calliptera
ENSGAFG00000008975	mbd1b	50	37.079	ENSCJAG00000004959	MBD1	51	52.174	Callithrix_jacchus
ENSGAFG00000008975	mbd1b	51	32.464	ENSCPOG00000001671	MBD1	67	32.941	Cavia_porcellus
ENSGAFG00000008975	mbd1b	53	38.119	ENSCATG00000029959	MBD1	54	52.308	Cercocebus_atys
ENSGAFG00000008975	mbd1b	50	34.857	ENSCANG00000033425	MBD1	54	52.308	Colobus_angolensis_palliatus
ENSGAFG00000008975	mbd1b	90	56.005	ENSCSEG00000009082	mbd1b	94	56.131	Cynoglossus_semilaevis
ENSGAFG00000008975	mbd1b	99	76.634	ENSCVAG00000001167	mbd1b	99	76.392	Cyprinodon_variegatus
ENSGAFG00000008975	mbd1b	92	36.855	ENSDARG00000025699	mbd1b	80	37.484	Danio_rerio
ENSGAFG00000008975	mbd1b	50	33.523	ENSDNOG00000015998	MBD1	52	52.308	Dasypus_novemcinctus
ENSGAFG00000008975	mbd1b	53	36.869	ENSEASG00005003857	MBD1	54	52.308	Equus_asinus_asinus
ENSGAFG00000008975	mbd1b	84	58.025	ENSELUG00000004375	mbd1b	85	45.503	Esox_lucius
ENSGAFG00000008975	mbd1b	100	76.784	ENSFHEG00000020120	mbd1b	100	76.179	Fundulus_heteroclitus
ENSGAFG00000008975	mbd1b	69	76.712	ENSGACG00000012106	-	99	76.712	Gasterosteus_aculeatus
ENSGAFG00000008975	mbd1b	50	34.857	ENSGGOG00000016966	MBD1	52	52.308	Gorilla_gorilla
ENSGAFG00000008975	mbd1b	90	66.178	ENSHBUG00000014270	mbd1b	89	65.467	Haplochromis_burtoni
ENSGAFG00000008975	mbd1b	91	55.140	ENSHCOG00000009952	mbd1b	92	54.161	Hippocampus_comes
ENSGAFG00000008975	mbd1b	92	36.823	ENSIPUG00000015243	-	95	37.674	Ictalurus_punctatus
ENSGAFG00000008975	mbd1b	99	69.701	ENSKMAG00000020760	mbd1b	100	69.788	Kryptolebias_marmoratus
ENSGAFG00000008975	mbd1b	53	34.361	ENSMLEG00000043121	MBD1	54	52.308	Mandrillus_leucophaeus
ENSGAFG00000008975	mbd1b	74	63.563	ENSMAMG00000023341	-	86	64.937	Mastacembelus_armatus
ENSGAFG00000008975	mbd1b	90	66.312	ENSMZEG00005010421	mbd1b	89	65.333	Maylandia_zebra
ENSGAFG00000008975	mbd1b	99	53.881	ENSMMOG00000011607	mbd1b	86	87.179	Mola_mola
ENSGAFG00000008975	mbd1b	97	63.107	ENSMALG00000007808	mbd1b	98	60.970	Monopterus_albus
ENSGAFG00000008975	mbd1b	50	30.435	ENSMLUG00000008286	MBD1	50	57.143	Myotis_lucifugus
ENSGAFG00000008975	mbd1b	90	66.578	ENSONIG00000020289	mbd1b	98	61.856	Oreochromis_niloticus
ENSGAFG00000008975	mbd1b	99	62.813	ENSORLG00000029390	mbd1b	99	62.619	Oryzias_latipes
ENSGAFG00000008975	mbd1b	99	62.694	ENSORLG00020000575	mbd1b	99	62.395	Oryzias_latipes_hni
ENSGAFG00000008975	mbd1b	99	62.738	ENSORLG00015014812	mbd1b	99	62.545	Oryzias_latipes_hsok
ENSGAFG00000008975	mbd1b	99	60.514	ENSOMEG00000023660	mbd1b	100	59.837	Oryzias_melastigma
ENSGAFG00000008975	mbd1b	50	34.857	ENSPTRG00000010021	MBD1	52	52.308	Pan_troglodytes
ENSGAFG00000008975	mbd1b	53	38.119	ENSPANG00000010867	MBD1	52	52.308	Papio_anubis
ENSGAFG00000008975	mbd1b	51	43.373	ENSPCIG00000027937	-	74	36.196	Phascolarctos_cinereus
ENSGAFG00000008975	mbd1b	100	95.614	ENSPFOG00000007511	mbd1b	100	95.614	Poecilia_formosa
ENSGAFG00000008975	mbd1b	100	95.592	ENSPLAG00000021258	mbd1b	100	95.592	Poecilia_latipinna
ENSGAFG00000008975	mbd1b	100	95.975	ENSPMEG00000024145	mbd1b	100	95.975	Poecilia_mexicana
ENSGAFG00000008975	mbd1b	100	95.472	ENSPREG00000021805	mbd1b	100	94.214	Poecilia_reticulata
ENSGAFG00000008975	mbd1b	53	35.644	ENSPCOG00000012450	MBD1	70	35.859	Propithecus_coquereli
ENSGAFG00000008975	mbd1b	90	39.748	ENSPNAG00000018075	mbd1b	81	48.128	Pygocentrus_nattereri
ENSGAFG00000008975	mbd1b	50	33.085	ENSRBIG00000041294	MBD1	54	52.308	Rhinopithecus_bieti
ENSGAFG00000008975	mbd1b	50	33.085	ENSRROG00000032517	MBD1	52	52.308	Rhinopithecus_roxellana
ENSGAFG00000008975	mbd1b	50	37.640	ENSSBOG00000027169	MBD1	51	52.174	Saimiri_boliviensis_boliviensis
ENSGAFG00000008975	mbd1b	73	48.649	ENSSFOG00015008591	-	66	50.746	Scleropages_formosus
ENSGAFG00000008975	mbd1b	94	62.949	ENSSMAG00000014640	mbd1b	82	63.506	Scophthalmus_maximus
ENSGAFG00000008975	mbd1b	90	66.667	ENSSDUG00000012996	mbd1b	86	65.223	Seriola_dumerili
ENSGAFG00000008975	mbd1b	82	59.091	ENSSLDG00000012422	mbd1b	98	59.729	Seriola_lalandi_dorsalis
ENSGAFG00000008975	mbd1b	100	66.308	ENSSPAG00000021447	mbd1b	99	64.636	Stegastes_partitus
ENSGAFG00000008975	mbd1b	50	31.235	ENSSSCG00000004516	MBD1	50	50.769	Sus_scrofa
ENSGAFG00000008975	mbd1b	99	57.143	ENSTRUG00000013422	mbd1b	99	56.416	Takifugu_rubripes
ENSGAFG00000008975	mbd1b	60	58.779	ENSTNIG00000007326	-	73	58.779	Tetraodon_nigroviridis
ENSGAFG00000008975	mbd1b	100	96.370	ENSXMAG00000005628	mbd1b	100	96.370	Xiphophorus_maculatus