EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000009038 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12566 bases
Position: chrNHOQ01001229.1:10641352-10653917
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013440	NUC173	PF08161.12	4.3e-75	1	1
ENSGAFP00000013457	NUC173	PF08161.12	1.1e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013595	-	3816	-	ENSGAFP00000013457	1271 (aa)	-	-
ENSGAFT00000013578	-	4835	-	ENSGAFP00000013440	1290 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009038	rrp12	92	75.000	ENSG00000052749	RRP12	100	76.562	Homo_sapiens
ENSGAFG00000009038	rrp12	99	85.093	ENSAPOG00000013355	rrp12	99	84.681	Acanthochromis_polyacanthus
ENSGAFG00000009038	rrp12	99	63.874	ENSAMEG00000000134	RRP12	99	64.241	Ailuropoda_melanoleuca
ENSGAFG00000009038	rrp12	99	87.666	ENSACIG00000022673	rrp12	99	87.666	Amphilophus_citrinellus
ENSGAFG00000009038	rrp12	99	87.900	ENSAOCG00000016149	rrp12	99	87.900	Amphiprion_ocellaris
ENSGAFG00000009038	rrp12	99	86.304	ENSAPEG00000016023	rrp12	99	86.304	Amphiprion_percula
ENSGAFG00000009038	rrp12	99	86.750	ENSATEG00000022627	rrp12	99	86.750	Anabas_testudineus
ENSGAFG00000009038	rrp12	97	60.350	ENSAPLG00000014387	RRP12	99	60.400	Anas_platyrhynchos
ENSGAFG00000009038	rrp12	99	59.660	ENSACAG00000002175	RRP12	99	59.674	Anolis_carolinensis
ENSGAFG00000009038	rrp12	92	74.342	ENSANAG00000037485	RRP12	99	74.342	Aotus_nancymaae
ENSGAFG00000009038	rrp12	99	86.027	ENSACLG00000007354	rrp12	99	86.027	Astatotilapia_calliptera
ENSGAFG00000009038	rrp12	99	75.466	ENSAMXG00000012852	rrp12	99	75.547	Astyanax_mexicanus
ENSGAFG00000009038	rrp12	99	63.462	ENSBTAG00000002191	RRP12	99	63.749	Bos_taurus
ENSGAFG00000009038	rrp12	85	61.455	ENSCJAG00000016549	-	99	62.044	Callithrix_jacchus
ENSGAFG00000009038	rrp12	99	63.825	ENSCAFG00000009043	RRP12	99	64.065	Canis_familiaris
ENSGAFG00000009038	rrp12	99	63.825	ENSCAFG00020005991	RRP12	99	64.065	Canis_lupus_dingo
ENSGAFG00000009038	rrp12	99	61.468	ENSCHIG00000011876	RRP12	99	61.432	Capra_hircus
ENSGAFG00000009038	rrp12	53	56.322	ENSTSYG00000030210	-	98	56.957	Carlito_syrichta
ENSGAFG00000009038	rrp12	97	57.974	ENSCAPG00000008991	RRP12	97	58.119	Cavia_aperea
ENSGAFG00000009038	rrp12	100	63.587	ENSCPOG00000004215	RRP12	99	63.848	Cavia_porcellus
ENSGAFG00000009038	rrp12	70	58.791	ENSCCAG00000033123	-	82	58.921	Cebus_capucinus
ENSGAFG00000009038	rrp12	79	66.519	ENSCCAG00000024088	RRP12	98	68.235	Cebus_capucinus
ENSGAFG00000009038	rrp12	99	60.000	ENSCATG00000045310	RRP12	99	60.294	Cercocebus_atys
ENSGAFG00000009038	rrp12	100	63.231	ENSCLAG00000003753	RRP12	99	63.643	Chinchilla_lanigera
ENSGAFG00000009038	rrp12	88	62.522	ENSCSAG00000005877	RRP12	99	62.895	Chlorocebus_sabaeus
ENSGAFG00000009038	rrp12	59	70.715	ENSCHOG00000003095	-	60	70.715	Choloepus_hoffmanni
ENSGAFG00000009038	rrp12	94	65.375	ENSCPBG00000011935	RRP12	97	65.394	Chrysemys_picta_bellii
ENSGAFG00000009038	rrp12	64	40.142	ENSCSAVG00000006059	-	99	39.692	Ciona_savignyi
ENSGAFG00000009038	rrp12	92	75.000	ENSCANG00000031653	RRP12	99	64.601	Colobus_angolensis_palliatus
ENSGAFG00000009038	rrp12	90	63.598	ENSCGRG00001004338	Rrp12	99	64.065	Cricetulus_griseus_chok1gshd
ENSGAFG00000009038	rrp12	99	63.194	ENSCGRG00000011965	Rrp12	99	63.615	Cricetulus_griseus_crigri
ENSGAFG00000009038	rrp12	99	83.023	ENSCSEG00000007799	rrp12	99	83.255	Cynoglossus_semilaevis
ENSGAFG00000009038	rrp12	99	93.125	ENSCVAG00000003418	rrp12	99	93.125	Cyprinodon_variegatus
ENSGAFG00000009038	rrp12	99	73.974	ENSDARG00000022410	rrp12	99	74.415	Danio_rerio
ENSGAFG00000009038	rrp12	99	63.279	ENSDNOG00000005120	RRP12	99	63.349	Dasypus_novemcinctus
ENSGAFG00000009038	rrp12	99	63.566	ENSDORG00000009199	Rrp12	99	64.396	Dipodomys_ordii
ENSGAFG00000009038	rrp12	91	67.143	ENSETEG00000002455	RRP12	92	67.143	Echinops_telfairi
ENSGAFG00000009038	rrp12	90	50.633	ENSEBUG00000006555	rrp12	96	69.231	Eptatretus_burgeri
ENSGAFG00000009038	rrp12	99	64.099	ENSEASG00005008693	RRP12	99	64.546	Equus_asinus_asinus
ENSGAFG00000009038	rrp12	94	63.934	ENSECAG00000010892	RRP12	99	64.492	Equus_caballus
ENSGAFG00000009038	rrp12	69	52.235	ENSEEUG00000005447	-	64	57.647	Erinaceus_europaeus
ENSGAFG00000009038	rrp12	99	77.537	ENSELUG00000010510	rrp12	100	77.561	Esox_lucius
ENSGAFG00000009038	rrp12	92	75.000	ENSFCAG00000028639	RRP12	99	64.628	Felis_catus
ENSGAFG00000009038	rrp12	94	63.599	ENSFALG00000008458	RRP12	99	63.734	Ficedula_albicollis
ENSGAFG00000009038	rrp12	99	63.174	ENSFDAG00000019108	RRP12	95	63.721	Fukomys_damarensis
ENSGAFG00000009038	rrp12	99	83.307	ENSFHEG00000004148	rrp12	99	82.761	Fundulus_heteroclitus
ENSGAFG00000009038	rrp12	99	70.325	ENSGMOG00000004188	rrp12	99	70.739	Gadus_morhua
ENSGAFG00000009038	rrp12	99	64.198	ENSGALG00000041331	RRP12	96	65.585	Gallus_gallus
ENSGAFG00000009038	rrp12	99	83.216	ENSGACG00000007175	rrp12	99	83.216	Gasterosteus_aculeatus
ENSGAFG00000009038	rrp12	68	67.894	ENSGAGG00000019169	RRP12	96	68.203	Gopherus_agassizii
ENSGAFG00000009038	rrp12	92	75.000	ENSGGOG00000014850	RRP12	99	64.524	Gorilla_gorilla
ENSGAFG00000009038	rrp12	99	86.417	ENSHBUG00000023527	rrp12	99	86.417	Haplochromis_burtoni
ENSGAFG00000009038	rrp12	99	63.482	ENSHGLG00000016772	RRP12	99	63.848	Heterocephalus_glaber_female
ENSGAFG00000009038	rrp12	99	63.482	ENSHGLG00100015110	RRP12	99	63.848	Heterocephalus_glaber_male
ENSGAFG00000009038	rrp12	100	79.767	ENSHCOG00000019519	rrp12	99	79.844	Hippocampus_comes
ENSGAFG00000009038	rrp12	100	74.381	ENSIPUG00000000311	RRP12	99	74.493	Ictalurus_punctatus
ENSGAFG00000009038	rrp12	99	64.330	ENSSTOG00000006515	RRP12	99	64.679	Ictidomys_tridecemlineatus
ENSGAFG00000009038	rrp12	96	63.309	ENSJJAG00000000110	Rrp12	98	63.527	Jaculus_jaculus
ENSGAFG00000009038	rrp12	99	88.759	ENSKMAG00000020621	rrp12	99	88.759	Kryptolebias_marmoratus
ENSGAFG00000009038	rrp12	99	80.683	ENSLBEG00000015335	rrp12	99	81.030	Labrus_bergylta
ENSGAFG00000009038	rrp12	73	64.419	ENSLACG00000016633	RRP12	82	64.419	Latimeria_chalumnae
ENSGAFG00000009038	rrp12	100	70.817	ENSLOCG00000003846	rrp12	99	70.824	Lepisosteus_oculatus
ENSGAFG00000009038	rrp12	99	63.902	ENSLAFG00000015965	RRP12	99	63.960	Loxodonta_africana
ENSGAFG00000009038	rrp12	92	74.342	ENSMFAG00000041558	RRP12	99	64.524	Macaca_fascicularis
ENSGAFG00000009038	rrp12	92	74.342	ENSMMUG00000019634	RRP12	99	64.524	Macaca_mulatta
ENSGAFG00000009038	rrp12	92	74.342	ENSMNEG00000036759	RRP12	99	61.735	Macaca_nemestrina
ENSGAFG00000009038	rrp12	92	75.000	ENSMLEG00000041317	RRP12	99	61.923	Mandrillus_leucophaeus
ENSGAFG00000009038	rrp12	99	84.531	ENSMAMG00000002964	rrp12	99	87.105	Mastacembelus_armatus
ENSGAFG00000009038	rrp12	99	86.105	ENSMZEG00005003241	rrp12	99	86.105	Maylandia_zebra
ENSGAFG00000009038	rrp12	99	62.096	ENSMGAG00000009829	RRP12	99	62.355	Meleagris_gallopavo
ENSGAFG00000009038	rrp12	99	60.957	ENSMAUG00000020743	Rrp12	99	61.008	Mesocricetus_auratus
ENSGAFG00000009038	rrp12	99	64.049	ENSMICG00000007624	RRP12	99	64.419	Microcebus_murinus
ENSGAFG00000009038	rrp12	100	63.664	ENSMOCG00000006753	Rrp12	99	64.109	Microtus_ochrogaster
ENSGAFG00000009038	rrp12	100	82.339	ENSMMOG00000010708	rrp12	99	82.592	Mola_mola
ENSGAFG00000009038	rrp12	99	64.346	ENSMODG00000004315	RRP12	99	64.541	Monodelphis_domestica
ENSGAFG00000009038	rrp12	99	80.078	ENSMALG00000016560	rrp12	99	85.605	Monopterus_albus
ENSGAFG00000009038	rrp12	99	63.053	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.259	Mus_caroli
ENSGAFG00000009038	rrp12	99	63.713	ENSMUSG00000035049	Rrp12	99	63.926	Mus_musculus
ENSGAFG00000009038	rrp12	100	63.510	MGP_PahariEiJ_G0014447	Rrp12	99	63.848	Mus_pahari
ENSGAFG00000009038	rrp12	99	63.790	MGP_SPRETEiJ_G0023878	Rrp12	99	64.003	Mus_spretus
ENSGAFG00000009038	rrp12	99	63.769	ENSMPUG00000017046	RRP12	99	64.059	Mustela_putorius_furo
ENSGAFG00000009038	rrp12	99	64.160	ENSMLUG00000017160	RRP12	99	64.402	Myotis_lucifugus
ENSGAFG00000009038	rrp12	99	64.099	ENSNGAG00000024144	Rrp12	99	64.313	Nannospalax_galili
ENSGAFG00000009038	rrp12	99	84.621	ENSNBRG00000009987	rrp12	99	84.621	Neolamprologus_brichardi
ENSGAFG00000009038	rrp12	99	55.880	ENSNLEG00000013762	RRP12	99	56.081	Nomascus_leucogenys
ENSGAFG00000009038	rrp12	100	58.546	ENSMEUG00000003185	RRP12	99	59.080	Notamacropus_eugenii
ENSGAFG00000009038	rrp12	94	67.221	ENSOPRG00000005001	RRP12	93	67.221	Ochotona_princeps
ENSGAFG00000009038	rrp12	100	63.573	ENSODEG00000016439	RRP12	99	63.679	Octodon_degus
ENSGAFG00000009038	rrp12	99	86.729	ENSONIG00000009528	rrp12	99	86.729	Oreochromis_niloticus
ENSGAFG00000009038	rrp12	100	59.708	ENSOANG00000006560	RRP12	99	59.861	Ornithorhynchus_anatinus
ENSGAFG00000009038	rrp12	99	63.272	ENSOCUG00000005662	RRP12	99	64.130	Oryctolagus_cuniculus
ENSGAFG00000009038	rrp12	99	85.714	ENSORLG00000008688	rrp12	99	85.775	Oryzias_latipes
ENSGAFG00000009038	rrp12	97	86.248	ENSORLG00020002355	rrp12	99	86.169	Oryzias_latipes_hni
ENSGAFG00000009038	rrp12	99	85.792	ENSORLG00015006709	rrp12	99	85.792	Oryzias_latipes_hsok
ENSGAFG00000009038	rrp12	97	86.169	ENSOMEG00000002609	rrp12	99	86.169	Oryzias_melastigma
ENSGAFG00000009038	rrp12	99	63.134	ENSOGAG00000001626	RRP12	99	63.341	Otolemur_garnettii
ENSGAFG00000009038	rrp12	99	62.673	ENSOARG00000009681	RRP12	99	62.877	Ovis_aries
ENSGAFG00000009038	rrp12	92	75.000	ENSPPAG00000043885	RRP12	99	62.510	Pan_paniscus
ENSGAFG00000009038	rrp12	92	74.342	ENSPPRG00000002029	RRP12	99	64.474	Panthera_pardus
ENSGAFG00000009038	rrp12	92	75.000	ENSPTIG00000004428	RRP12	99	61.960	Panthera_tigris_altaica
ENSGAFG00000009038	rrp12	92	75.000	ENSPTRG00000002806	RRP12	99	62.510	Pan_troglodytes
ENSGAFG00000009038	rrp12	92	75.000	ENSPANG00000021360	RRP12	99	64.756	Papio_anubis
ENSGAFG00000009038	rrp12	100	74.094	ENSPKIG00000016516	rrp12	99	74.281	Paramormyrops_kingsleyae
ENSGAFG00000009038	rrp12	99	81.279	ENSPMGG00000020217	rrp12	99	80.889	Periophthalmus_magnuspinnatus
ENSGAFG00000009038	rrp12	100	64.000	ENSPEMG00000008437	Rrp12	99	64.524	Peromyscus_maniculatus_bairdii
ENSGAFG00000009038	rrp12	99	46.802	ENSPMAG00000007493	rrp12	99	45.565	Petromyzon_marinus
ENSGAFG00000009038	rrp12	99	64.059	ENSPCIG00000002157	RRP12	99	64.025	Phascolarctos_cinereus
ENSGAFG00000009038	rrp12	100	96.899	ENSPFOG00000014975	rrp12	100	96.899	Poecilia_formosa
ENSGAFG00000009038	rrp12	100	96.822	ENSPLAG00000009840	rrp12	100	96.822	Poecilia_latipinna
ENSGAFG00000009038	rrp12	100	96.899	ENSPMEG00000021871	rrp12	100	96.899	Poecilia_mexicana
ENSGAFG00000009038	rrp12	99	93.323	ENSPREG00000020950	rrp12	99	93.323	Poecilia_reticulata
ENSGAFG00000009038	rrp12	99	63.308	ENSPPYG00000002528	RRP12	99	63.594	Pongo_abelii
ENSGAFG00000009038	rrp12	94	76.836	ENSPCAG00000008967	RRP12	94	76.836	Procavia_capensis
ENSGAFG00000009038	rrp12	99	76.316	ENSPCOG00000014009	RRP12	99	64.463	Propithecus_coquereli
ENSGAFG00000009038	rrp12	99	61.047	ENSPVAG00000003370	RRP12	99	61.240	Pteropus_vampyrus
ENSGAFG00000009038	rrp12	99	86.495	ENSPNYG00000009451	rrp12	99	86.495	Pundamilia_nyererei
ENSGAFG00000009038	rrp12	94	87.273	ENSPNAG00000007658	rrp12	99	76.094	Pygocentrus_nattereri
ENSGAFG00000009038	rrp12	99	63.377	ENSRNOG00000048495	Rrp12	99	63.643	Rattus_norvegicus
ENSGAFG00000009038	rrp12	92	75.000	ENSRBIG00000021296	RRP12	99	75.000	Rhinopithecus_bieti
ENSGAFG00000009038	rrp12	92	75.000	ENSRROG00000032482	RRP12	99	75.000	Rhinopithecus_roxellana
ENSGAFG00000009038	rrp12	92	73.684	ENSSBOG00000030992	RRP12	99	73.684	Saimiri_boliviensis_boliviensis
ENSGAFG00000009038	rrp12	99	63.643	ENSSHAG00000018275	RRP12	99	63.876	Sarcophilus_harrisii
ENSGAFG00000009038	rrp12	99	76.297	ENSSFOG00015016400	rrp12	99	76.383	Scleropages_formosus
ENSGAFG00000009038	rrp12	99	85.469	ENSSMAG00000004047	rrp12	99	85.792	Scophthalmus_maximus
ENSGAFG00000009038	rrp12	99	87.344	ENSSDUG00000022871	rrp12	99	87.344	Seriola_dumerili
ENSGAFG00000009038	rrp12	99	87.031	ENSSLDG00000003038	rrp12	99	87.031	Seriola_lalandi_dorsalis
ENSGAFG00000009038	rrp12	100	61.497	ENSSPUG00000012221	RRP12	99	61.664	Sphenodon_punctatus
ENSGAFG00000009038	rrp12	99	87.900	ENSSPAG00000002261	rrp12	99	88.056	Stegastes_partitus
ENSGAFG00000009038	rrp12	100	63.048	ENSSSCG00000010514	RRP12	99	63.460	Sus_scrofa
ENSGAFG00000009038	rrp12	89	60.297	ENSTGUG00000009711	RRP12	99	60.439	Taeniopygia_guttata
ENSGAFG00000009038	rrp12	100	78.605	ENSTRUG00000012017	rrp12	99	78.438	Takifugu_rubripes
ENSGAFG00000009038	rrp12	100	83.656	ENSTNIG00000016522	rrp12	99	83.685	Tetraodon_nigroviridis
ENSGAFG00000009038	rrp12	78	73.039	ENSTBEG00000004907	RRP12	79	73.039	Tupaia_belangeri
ENSGAFG00000009038	rrp12	100	61.722	ENSTTRG00000009878	RRP12	99	62.104	Tursiops_truncatus
ENSGAFG00000009038	rrp12	99	64.160	ENSUAMG00000009092	RRP12	99	64.451	Ursus_americanus
ENSGAFG00000009038	rrp12	99	62.239	ENSUMAG00000021621	RRP12	99	62.830	Ursus_maritimus
ENSGAFG00000009038	rrp12	99	64.059	ENSVVUG00000023168	RRP12	99	64.087	Vulpes_vulpes
ENSGAFG00000009038	rrp12	99	65.659	ENSXETG00000003430	rrp12	99	65.835	Xenopus_tropicalis
ENSGAFG00000009038	rrp12	92	95.389	ENSXCOG00000012082	rrp12	97	96.481	Xiphophorus_couchianus
ENSGAFG00000009038	rrp12	100	97.984	ENSXMAG00000013498	rrp12	100	97.984	Xiphophorus_maculatus