EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009249 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 1686 bases
Position: chrNHOQ01000682.1:1595300-1596985
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013708	DEAD	PF00270.29	2.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013849	-	1686	-	ENSGAFP00000013708	561 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009249	ddx28	65	30.053	ENSGAFG00000004388	ddx55	61	30.053
ENSGAFG00000009249	ddx28	73	30.244	ENSGAFG00000017403	ddx47	80	30.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009249	ddx28	89	48.343	ENSG00000182810	DDX28	94	48.343	Homo_sapiens
ENSGAFG00000009249	ddx28	99	75.763	ENSAPOG00000000991	ddx28	97	75.763	Acanthochromis_polyacanthus
ENSGAFG00000009249	ddx28	89	48.047	ENSAMEG00000019426	DDX28	94	48.047	Ailuropoda_melanoleuca
ENSGAFG00000009249	ddx28	99	74.506	ENSACIG00000021615	ddx28	99	74.506	Amphilophus_citrinellus
ENSGAFG00000009249	ddx28	99	75.045	ENSAOCG00000004610	ddx28	97	75.045	Amphiprion_ocellaris
ENSGAFG00000009249	ddx28	99	74.686	ENSAPEG00000002143	ddx28	97	74.686	Amphiprion_percula
ENSGAFG00000009249	ddx28	99	73.429	ENSATEG00000018691	ddx28	99	73.429	Anabas_testudineus
ENSGAFG00000009249	ddx28	89	47.441	ENSACAG00000009755	DDX28	92	47.244	Anolis_carolinensis
ENSGAFG00000009249	ddx28	99	71.095	ENSACLG00000012984	ddx28	99	71.095	Astatotilapia_calliptera
ENSGAFG00000009249	ddx28	96	59.319	ENSAMXG00000005878	ddx28	98	59.213	Astyanax_mexicanus
ENSGAFG00000009249	ddx28	89	48.833	ENSBTAG00000004290	DDX28	93	48.833	Bos_taurus
ENSGAFG00000009249	ddx28	88	48.126	ENSCAFG00000020327	DDX28	94	48.126	Canis_familiaris
ENSGAFG00000009249	ddx28	88	48.126	ENSCAFG00020019785	DDX28	94	48.126	Canis_lupus_dingo
ENSGAFG00000009249	ddx28	90	49.326	ENSCHIG00000009658	DDX28	94	49.326	Capra_hircus
ENSGAFG00000009249	ddx28	89	48.924	ENSCPOG00000013746	DDX28	94	48.924	Cavia_porcellus
ENSGAFG00000009249	ddx28	89	48.444	ENSCSAG00000018472	DDX28	92	48.444	Chlorocebus_sabaeus
ENSGAFG00000009249	ddx28	81	50.652	ENSCPBG00000012105	DDX28	81	52.605	Chrysemys_picta_bellii
ENSGAFG00000009249	ddx28	64	36.164	ENSCSAVG00000006341	-	94	35.890	Ciona_savignyi
ENSGAFG00000009249	ddx28	88	48.600	ENSCGRG00001024412	Ddx28	94	48.902	Cricetulus_griseus_chok1gshd
ENSGAFG00000009249	ddx28	99	66.547	ENSCSEG00000011651	ddx28	99	66.547	Cynoglossus_semilaevis
ENSGAFG00000009249	ddx28	99	81.917	ENSCVAG00000004044	ddx28	99	81.917	Cyprinodon_variegatus
ENSGAFG00000009249	ddx28	98	59.858	ENSDARG00000060411	ddx28	98	59.858	Danio_rerio
ENSGAFG00000009249	ddx28	63	54.247	ENSDNOG00000033593	DDX28	98	54.521	Dasypus_novemcinctus
ENSGAFG00000009249	ddx28	89	47.266	ENSDORG00000028868	Ddx28	94	47.758	Dipodomys_ordii
ENSGAFG00000009249	ddx28	80	36.383	FBgn0086130	Dbp21E2	87	35.438	Drosophila_melanogaster
ENSGAFG00000009249	ddx28	90	48.155	ENSETEG00000001062	-	94	48.155	Echinops_telfairi
ENSGAFG00000009249	ddx28	73	44.149	ENSEBUG00000004791	ddx28	76	42.512	Eptatretus_burgeri
ENSGAFG00000009249	ddx28	89	48.833	ENSEASG00005020387	DDX28	94	48.833	Equus_asinus_asinus
ENSGAFG00000009249	ddx28	89	49.027	ENSECAG00000006451	DDX28	94	49.027	Equus_caballus
ENSGAFG00000009249	ddx28	70	43.210	ENSEEUG00000005017	DDX28	93	43.210	Erinaceus_europaeus
ENSGAFG00000009249	ddx28	93	64.474	ENSELUG00000005302	ddx28	96	66.075	Esox_lucius
ENSGAFG00000009249	ddx28	89	49.318	ENSFCAG00000012858	DDX28	94	49.318	Felis_catus
ENSGAFG00000009249	ddx28	99	79.099	ENSFHEG00000012573	ddx28	99	79.242	Fundulus_heteroclitus
ENSGAFG00000009249	ddx28	91	66.794	ENSGMOG00000017045	ddx28	98	66.794	Gadus_morhua
ENSGAFG00000009249	ddx28	89	44.402	ENSGALG00000048700	DDX28	88	44.961	Gallus_gallus
ENSGAFG00000009249	ddx28	90	75.692	ENSGACG00000016367	ddx28	94	75.692	Gasterosteus_aculeatus
ENSGAFG00000009249	ddx28	78	47.651	ENSGAGG00000004565	DDX28	97	47.651	Gopherus_agassizii
ENSGAFG00000009249	ddx28	89	48.538	ENSGGOG00000001220	DDX28	94	48.538	Gorilla_gorilla
ENSGAFG00000009249	ddx28	99	74.865	ENSHBUG00000001016	ddx28	99	74.865	Haplochromis_burtoni
ENSGAFG00000009249	ddx28	96	69.908	ENSHCOG00000017590	ddx28	97	69.908	Hippocampus_comes
ENSGAFG00000009249	ddx28	89	63.116	ENSIPUG00000017350	Ddx28	89	63.116	Ictalurus_punctatus
ENSGAFG00000009249	ddx28	89	47.665	ENSSTOG00000002064	DDX28	94	47.665	Ictidomys_tridecemlineatus
ENSGAFG00000009249	ddx28	90	47.893	ENSJJAG00000012460	-	94	47.692	Jaculus_jaculus
ENSGAFG00000009249	ddx28	99	75.583	ENSKMAG00000018183	ddx28	99	75.583	Kryptolebias_marmoratus
ENSGAFG00000009249	ddx28	99	71.914	ENSLBEG00000006072	ddx28	99	71.914	Labrus_bergylta
ENSGAFG00000009249	ddx28	89	56.773	ENSLACG00000005578	DDX28	87	56.773	Latimeria_chalumnae
ENSGAFG00000009249	ddx28	89	59.604	ENSLOCG00000017604	ddx28	91	59.604	Lepisosteus_oculatus
ENSGAFG00000009249	ddx28	89	48.538	ENSLAFG00000031239	DDX28	93	48.538	Loxodonta_africana
ENSGAFG00000009249	ddx28	89	48.444	ENSMMUG00000010836	DDX28	92	48.444	Macaca_mulatta
ENSGAFG00000009249	ddx28	98	71.790	ENSMAMG00000020220	ddx28	98	71.790	Mastacembelus_armatus
ENSGAFG00000009249	ddx28	99	74.865	ENSMZEG00005009292	ddx28	99	74.865	Maylandia_zebra
ENSGAFG00000009249	ddx28	89	38.627	ENSMICG00000012346	-	92	38.235	Microcebus_murinus
ENSGAFG00000009249	ddx28	90	48.833	ENSMOCG00000009815	Ddx28	94	48.833	Microtus_ochrogaster
ENSGAFG00000009249	ddx28	99	69.659	ENSMMOG00000000270	ddx28	99	69.659	Mola_mola
ENSGAFG00000009249	ddx28	90	49.318	ENSMODG00000005303	DDX28	93	49.318	Monodelphis_domestica
ENSGAFG00000009249	ddx28	99	71.048	ENSMALG00000008864	ddx28	99	71.048	Monopterus_albus
ENSGAFG00000009249	ddx28	89	48.622	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.622	Mus_caroli
ENSGAFG00000009249	ddx28	89	49.216	ENSMUSG00000045538	Ddx28	93	49.216	Mus_musculus
ENSGAFG00000009249	ddx28	89	49.020	MGP_PahariEiJ_G0023110	Ddx28	93	49.020	Mus_pahari
ENSGAFG00000009249	ddx28	89	49.216	MGP_SPRETEiJ_G0032628	Ddx28	93	49.216	Mus_spretus
ENSGAFG00000009249	ddx28	65	51.482	ENSMPUG00000006915	DDX28	92	51.482	Mustela_putorius_furo
ENSGAFG00000009249	ddx28	89	49.509	ENSMLUG00000005899	DDX28	95	48.473	Myotis_lucifugus
ENSGAFG00000009249	ddx28	90	48.743	ENSNGAG00000015762	Ddx28	94	48.743	Nannospalax_galili
ENSGAFG00000009249	ddx28	99	74.865	ENSNBRG00000001337	ddx28	100	74.865	Neolamprologus_brichardi
ENSGAFG00000009249	ddx28	99	75.045	ENSONIG00000020597	ddx28	99	75.045	Oreochromis_niloticus
ENSGAFG00000009249	ddx28	50	51.590	ENSOANG00000003551	-	98	51.590	Ornithorhynchus_anatinus
ENSGAFG00000009249	ddx28	95	47.514	ENSOCUG00000023074	DDX28	99	47.698	Oryctolagus_cuniculus
ENSGAFG00000009249	ddx28	92	76.493	ENSORLG00000011968	ddx28	93	76.493	Oryzias_latipes
ENSGAFG00000009249	ddx28	92	76.493	ENSORLG00020001951	ddx28	94	76.493	Oryzias_latipes_hni
ENSGAFG00000009249	ddx28	92	76.686	ENSORLG00015023030	ddx28	94	76.686	Oryzias_latipes_hsok
ENSGAFG00000009249	ddx28	99	72.890	ENSOMEG00000012445	ddx28	99	72.890	Oryzias_melastigma
ENSGAFG00000009249	ddx28	89	48.837	ENSOGAG00000016895	DDX28	94	48.837	Otolemur_garnettii
ENSGAFG00000009249	ddx28	78	48.107	ENSOARG00000003313	DDX28	99	48.107	Ovis_aries
ENSGAFG00000009249	ddx28	89	46.004	ENSPPAG00000036971	DDX28	93	45.614	Pan_paniscus
ENSGAFG00000009249	ddx28	89	49.318	ENSPPRG00000018322	DDX28	94	49.318	Panthera_pardus
ENSGAFG00000009249	ddx28	89	47.563	ENSPTIG00000006444	DDX28	93	47.563	Panthera_tigris_altaica
ENSGAFG00000009249	ddx28	89	48.538	ENSPTRG00000008258	DDX28	94	48.538	Pan_troglodytes
ENSGAFG00000009249	ddx28	90	62.868	ENSPKIG00000021200	ddx28	93	62.868	Paramormyrops_kingsleyae
ENSGAFG00000009249	ddx28	50	59.220	ENSPSIG00000001127	DDX28	93	59.220	Pelodiscus_sinensis
ENSGAFG00000009249	ddx28	92	66.857	ENSPMGG00000007908	ddx28	93	66.857	Periophthalmus_magnuspinnatus
ENSGAFG00000009249	ddx28	90	48.062	ENSPEMG00000003395	Ddx28	94	48.062	Peromyscus_maniculatus_bairdii
ENSGAFG00000009249	ddx28	99	92.767	ENSPFOG00000020952	ddx28	97	92.767	Poecilia_formosa
ENSGAFG00000009249	ddx28	99	92.767	ENSPFOG00000020838	DDX28	99	92.767	Poecilia_formosa
ENSGAFG00000009249	ddx28	99	92.224	ENSPLAG00000016292	ddx28	97	92.224	Poecilia_latipinna
ENSGAFG00000009249	ddx28	99	92.767	ENSPMEG00000011311	ddx28	97	92.767	Poecilia_mexicana
ENSGAFG00000009249	ddx28	99	92.043	ENSPREG00000002899	ddx28	97	92.043	Poecilia_reticulata
ENSGAFG00000009249	ddx28	89	47.953	ENSPPYG00000007481	DDX28	94	47.953	Pongo_abelii
ENSGAFG00000009249	ddx28	89	48.249	ENSPCOG00000024632	DDX28	94	48.249	Propithecus_coquereli
ENSGAFG00000009249	ddx28	99	74.865	ENSPNYG00000018804	ddx28	99	74.865	Pundamilia_nyererei
ENSGAFG00000009249	ddx28	89	60.819	ENSPNAG00000014597	ddx28	95	60.819	Pygocentrus_nattereri
ENSGAFG00000009249	ddx28	89	48.343	ENSRNOG00000019817	Ddx28	93	48.343	Rattus_norvegicus
ENSGAFG00000009249	ddx28	89	61.811	ENSSFOG00015010181	ddx28	92	61.811	Scleropages_formosus
ENSGAFG00000009249	ddx28	89	74.701	ENSSMAG00000006831	ddx28	94	74.701	Scophthalmus_maximus
ENSGAFG00000009249	ddx28	99	74.643	ENSSDUG00000003257	ddx28	98	74.643	Seriola_dumerili
ENSGAFG00000009249	ddx28	99	73.929	ENSSLDG00000004513	ddx28	98	73.929	Seriola_lalandi_dorsalis
ENSGAFG00000009249	ddx28	95	46.939	ENSSARG00000014169	DDX28	99	46.939	Sorex_araneus
ENSGAFG00000009249	ddx28	99	75.943	ENSSPAG00000000988	ddx28	99	75.943	Stegastes_partitus
ENSGAFG00000009249	ddx28	92	47.655	ENSSSCG00000026038	DDX28	97	47.842	Sus_scrofa
ENSGAFG00000009249	ddx28	91	71.650	ENSTRUG00000007815	ddx28	93	71.650	Takifugu_rubripes
ENSGAFG00000009249	ddx28	89	72.366	ENSTNIG00000011352	ddx28	99	72.366	Tetraodon_nigroviridis
ENSGAFG00000009249	ddx28	73	61.972	ENSTBEG00000017695	DDX28	76	61.972	Tupaia_belangeri
ENSGAFG00000009249	ddx28	89	47.953	ENSUAMG00000016116	DDX28	93	47.953	Ursus_americanus
ENSGAFG00000009249	ddx28	76	50.114	ENSUMAG00000019200	DDX28	88	50.114	Ursus_maritimus
ENSGAFG00000009249	ddx28	72	43.165	ENSVVUG00000012876	DDX28	81	43.165	Vulpes_vulpes
ENSGAFG00000009249	ddx28	89	46.881	ENSXETG00000005435	ddx28	97	46.881	Xenopus_tropicalis
ENSGAFG00000009249	ddx28	97	94.312	ENSXCOG00000012364	ddx28	97	94.312	Xiphophorus_couchianus
ENSGAFG00000009249	ddx28	93	93.256	ENSXMAG00000019603	ddx28	94	93.256	Xiphophorus_maculatus