EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009309 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11491 bases
Position: chrNHOQ01002355.1:11149832-11161322
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013786	zf-RanBP	PF00641.18	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000013929	-	4366	-	ENSGAFP00000013786	699 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009309	shrprbck1r	59	42.993	ENSGAFG00000021405	sharpin	95	42.993

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009309	shrprbck1r	100	79.663	ENSAPOG00000022737	shrprbck1r	100	79.663	Acanthochromis_polyacanthus
ENSGAFG00000009309	shrprbck1r	59	57.343	ENSAPOG00000023352	sharpin	95	57.343	Acanthochromis_polyacanthus
ENSGAFG00000009309	shrprbck1r	100	79.661	ENSACIG00000002184	shrprbck1r	100	79.661	Amphilophus_citrinellus
ENSGAFG00000009309	shrprbck1r	100	82.022	ENSAOCG00000002890	shrprbck1r	100	82.022	Amphiprion_ocellaris
ENSGAFG00000009309	shrprbck1r	59	56.582	ENSAOCG00000017464	sharpin	95	56.582	Amphiprion_ocellaris
ENSGAFG00000009309	shrprbck1r	59	56.582	ENSAPEG00000004049	sharpin	95	56.582	Amphiprion_percula
ENSGAFG00000009309	shrprbck1r	100	80.224	ENSAPEG00000023274	shrprbck1r	100	80.224	Amphiprion_percula
ENSGAFG00000009309	shrprbck1r	59	58.005	ENSATEG00000007832	sharpin	88	58.005	Anabas_testudineus
ENSGAFG00000009309	shrprbck1r	100	77.887	ENSATEG00000014561	shrprbck1r	100	78.310	Anabas_testudineus
ENSGAFG00000009309	shrprbck1r	100	77.778	ENSACLG00000022609	shrprbck1r	100	78.481	Astatotilapia_calliptera
ENSGAFG00000009309	shrprbck1r	100	67.847	ENSAMXG00000021016	shrprbck1r	100	68.082	Astyanax_mexicanus
ENSGAFG00000009309	shrprbck1r	54	56.021	ENSAMXG00000006229	sharpin	97	56.021	Astyanax_mexicanus
ENSGAFG00000009309	shrprbck1r	100	71.650	ENSCSEG00000011306	shrprbck1r	100	71.932	Cynoglossus_semilaevis
ENSGAFG00000009309	shrprbck1r	100	90.268	ENSCVAG00000007250	shrprbck1r	100	90.268	Cyprinodon_variegatus
ENSGAFG00000009309	shrprbck1r	59	53.653	ENSCVAG00000006586	sharpin	95	53.653	Cyprinodon_variegatus
ENSGAFG00000009309	shrprbck1r	100	67.268	ENSDARG00000059871	shrprbck1r	100	67.406	Danio_rerio
ENSGAFG00000009309	shrprbck1r	54	55.155	ENSDARG00000076995	sharpin	94	55.155	Danio_rerio
ENSGAFG00000009309	shrprbck1r	100	70.588	ENSELUG00000016022	shrprbck1r	100	70.588	Esox_lucius
ENSGAFG00000009309	shrprbck1r	59	53.349	ENSFHEG00000013564	sharpin	94	53.349	Fundulus_heteroclitus
ENSGAFG00000009309	shrprbck1r	52	59.697	ENSGMOG00000010123	sharpin	91	59.697	Gadus_morhua
ENSGAFG00000009309	shrprbck1r	76	77.632	ENSGACG00000002544	shrprbck1r	99	79.463	Gasterosteus_aculeatus
ENSGAFG00000009309	shrprbck1r	100	78.481	ENSHBUG00000021933	shrprbck1r	100	78.682	Haplochromis_burtoni
ENSGAFG00000009309	shrprbck1r	62	51.936	ENSHCOG00000018847	sharpin	81	53.991	Hippocampus_comes
ENSGAFG00000009309	shrprbck1r	96	66.378	ENSIPUG00000014247	shrprbck1r	100	64.512	Ictalurus_punctatus
ENSGAFG00000009309	shrprbck1r	54	54.427	ENSIPUG00000011951	sharpin	99	54.427	Ictalurus_punctatus
ENSGAFG00000009309	shrprbck1r	59	54.861	ENSKMAG00000015204	sharpin	80	51.020	Kryptolebias_marmoratus
ENSGAFG00000009309	shrprbck1r	100	77.424	ENSKMAG00000015215	shrprbck1r	100	76.818	Kryptolebias_marmoratus
ENSGAFG00000009309	shrprbck1r	100	79.296	ENSLBEG00000016876	shrprbck1r	100	80.000	Labrus_bergylta
ENSGAFG00000009309	shrprbck1r	59	55.760	ENSLBEG00000016624	sharpin	96	56.136	Labrus_bergylta
ENSGAFG00000009309	shrprbck1r	95	52.624	ENSLACG00000010948	-	97	52.624	Latimeria_chalumnae
ENSGAFG00000009309	shrprbck1r	100	66.574	ENSLOCG00000008910	shrprbck1r	100	66.574	Lepisosteus_oculatus
ENSGAFG00000009309	shrprbck1r	100	77.606	ENSMAMG00000022930	shrprbck1r	100	77.887	Mastacembelus_armatus
ENSGAFG00000009309	shrprbck1r	100	77.637	ENSMZEG00005021257	shrprbck1r	100	78.340	Maylandia_zebra
ENSGAFG00000009309	shrprbck1r	100	75.732	ENSMMOG00000003764	shrprbck1r	100	75.732	Mola_mola
ENSGAFG00000009309	shrprbck1r	96	79.234	ENSMALG00000008861	shrprbck1r	95	79.234	Monopterus_albus
ENSGAFG00000009309	shrprbck1r	100	78.481	ENSNBRG00000002270	shrprbck1r	100	79.184	Neolamprologus_brichardi
ENSGAFG00000009309	shrprbck1r	100	78.814	ENSONIG00000014401	shrprbck1r	100	79.520	Oreochromis_niloticus
ENSGAFG00000009309	shrprbck1r	54	54.726	ENSONIG00000009626	-	97	54.726	Oreochromis_niloticus
ENSGAFG00000009309	shrprbck1r	100	78.420	ENSORLG00000007392	shrprbck1r	100	78.420	Oryzias_latipes
ENSGAFG00000009309	shrprbck1r	59	53.647	ENSORLG00000017281	sharpin	95	53.647	Oryzias_latipes
ENSGAFG00000009309	shrprbck1r	59	53.846	ENSORLG00020000801	sharpin	95	53.846	Oryzias_latipes_hni
ENSGAFG00000009309	shrprbck1r	100	77.856	ENSORLG00020018619	shrprbck1r	100	77.856	Oryzias_latipes_hni
ENSGAFG00000009309	shrprbck1r	59	53.613	ENSORLG00015009860	sharpin	95	53.613	Oryzias_latipes_hsok
ENSGAFG00000009309	shrprbck1r	100	77.715	ENSORLG00015018865	shrprbck1r	100	77.715	Oryzias_latipes_hsok
ENSGAFG00000009309	shrprbck1r	100	79.972	ENSOMEG00000012749	shrprbck1r	100	79.972	Oryzias_melastigma
ENSGAFG00000009309	shrprbck1r	59	45.169	ENSOMEG00000005729	sharpin	89	45.411	Oryzias_melastigma
ENSGAFG00000009309	shrprbck1r	66	58.664	ENSPKIG00000018308	-	96	58.664	Paramormyrops_kingsleyae
ENSGAFG00000009309	shrprbck1r	100	68.768	ENSPKIG00000006933	shrprbck1r	100	69.048	Paramormyrops_kingsleyae
ENSGAFG00000009309	shrprbck1r	100	72.843	ENSPMGG00000013254	shrprbck1r	100	72.843	Periophthalmus_magnuspinnatus
ENSGAFG00000009309	shrprbck1r	100	96.312	ENSPFOG00000004214	shrprbck1r	100	96.312	Poecilia_formosa
ENSGAFG00000009309	shrprbck1r	59	51.954	ENSPFOG00000015253	sharpin	95	51.954	Poecilia_formosa
ENSGAFG00000009309	shrprbck1r	59	52.184	ENSPLAG00000000423	sharpin	95	52.184	Poecilia_latipinna
ENSGAFG00000009309	shrprbck1r	100	96.312	ENSPLAG00000020523	shrprbck1r	100	96.312	Poecilia_latipinna
ENSGAFG00000009309	shrprbck1r	55	47.727	ENSPMEG00000023030	sharpin	89	47.727	Poecilia_mexicana
ENSGAFG00000009309	shrprbck1r	100	93.475	ENSPMEG00000006877	shrprbck1r	100	93.475	Poecilia_mexicana
ENSGAFG00000009309	shrprbck1r	59	52.064	ENSPREG00000009702	sharpin	95	52.064	Poecilia_reticulata
ENSGAFG00000009309	shrprbck1r	100	92.340	ENSPREG00000014689	shrprbck1r	100	92.340	Poecilia_reticulata
ENSGAFG00000009309	shrprbck1r	100	78.059	ENSPNYG00000022601	shrprbck1r	100	78.762	Pundamilia_nyererei
ENSGAFG00000009309	shrprbck1r	54	54.331	ENSPNAG00000002911	sharpin	99	54.450	Pygocentrus_nattereri
ENSGAFG00000009309	shrprbck1r	100	66.211	ENSPNAG00000007847	shrprbck1r	100	66.530	Pygocentrus_nattereri
ENSGAFG00000009309	shrprbck1r	62	53.333	ENSSFOG00015004028	sharpin	99	54.397	Scleropages_formosus
ENSGAFG00000009309	shrprbck1r	75	63.931	ENSSFOG00015014150	-	96	63.931	Scleropages_formosus
ENSGAFG00000009309	shrprbck1r	100	76.397	ENSSMAG00000018085	shrprbck1r	100	76.536	Scophthalmus_maximus
ENSGAFG00000009309	shrprbck1r	100	80.845	ENSSDUG00000002959	shrprbck1r	100	81.268	Seriola_dumerili
ENSGAFG00000009309	shrprbck1r	60	45.261	ENSSDUG00000019039	sharpin	96	45.261	Seriola_dumerili
ENSGAFG00000009309	shrprbck1r	100	80.563	ENSSLDG00000009026	shrprbck1r	100	80.986	Seriola_lalandi_dorsalis
ENSGAFG00000009309	shrprbck1r	96	77.794	ENSSPAG00000016097	shrprbck1r	99	77.794	Stegastes_partitus
ENSGAFG00000009309	shrprbck1r	100	73.876	ENSTRUG00000006949	shrprbck1r	100	74.579	Takifugu_rubripes
ENSGAFG00000009309	shrprbck1r	59	52.857	ENSTRUG00000011046	sharpin	96	53.589	Takifugu_rubripes
ENSGAFG00000009309	shrprbck1r	54	55.499	ENSTNIG00000008521	sharpin	94	55.499	Tetraodon_nigroviridis
ENSGAFG00000009309	shrprbck1r	100	90.935	ENSXCOG00000006701	shrprbck1r	100	90.935	Xiphophorus_couchianus
ENSGAFG00000009309	shrprbck1r	59	42.824	ENSXCOG00000015019	sharpin	96	42.824	Xiphophorus_couchianus
ENSGAFG00000009309	shrprbck1r	100	90.935	ENSXMAG00000018972	shrprbck1r	100	90.935	Xiphophorus_maculatus
ENSGAFG00000009309	shrprbck1r	59	52.184	ENSXMAG00000022076	sharpin	95	52.184	Xiphophorus_maculatus