EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009369 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 14635 bases
Position: chrNHOQ01001000.1:7622849-7637483
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013862	SAP	PF02037.27	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014006	-	5806	-	ENSGAFP00000013862	831 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009369	hnrnpub	53	38.565	ENSGAFG00000016579	si:ch211-107m4.1	72	35.197
ENSGAFG00000009369	hnrnpub	64	46.409	ENSGAFG00000015786	HNRNPUL1	57	47.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009369	hnrnpub	84	78.261	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSGAFG00000009369	hnrnpub	100	80.552	ENSAPOG00000017400	hnrnpub	100	80.552	Acanthochromis_polyacanthus
ENSGAFG00000009369	hnrnpub	84	78.261	ENSAMEG00000009145	HNRNPU	77	78.261	Ailuropoda_melanoleuca
ENSGAFG00000009369	hnrnpub	98	74.217	ENSACIG00000012138	hnrnpub	96	80.192	Amphilophus_citrinellus
ENSGAFG00000009369	hnrnpub	100	82.113	ENSAOCG00000015843	hnrnpub	100	81.393	Amphiprion_ocellaris
ENSGAFG00000009369	hnrnpub	100	82.113	ENSAPEG00000014679	hnrnpub	100	81.393	Amphiprion_percula
ENSGAFG00000009369	hnrnpub	98	81.074	ENSATEG00000016178	hnrnpub	97	82.029	Anabas_testudineus
ENSGAFG00000009369	hnrnpub	80	55.821	ENSACAG00000004511	HNRNPU	72	54.694	Anolis_carolinensis
ENSGAFG00000009369	hnrnpub	99	49.769	ENSANAG00000033895	-	75	53.744	Aotus_nancymaae
ENSGAFG00000009369	hnrnpub	100	79.712	ENSACLG00000008165	hnrnpub	100	80.144	Astatotilapia_calliptera
ENSGAFG00000009369	hnrnpub	84	78.261	ENSBTAG00000007606	HNRNPU	79	78.261	Bos_taurus
ENSGAFG00000009369	hnrnpub	84	78.261	ENSCJAG00000016914	HNRNPU	62	78.261	Callithrix_jacchus
ENSGAFG00000009369	hnrnpub	79	55.793	ENSCAFG00020000918	HNRNPU	75	54.038	Canis_lupus_dingo
ENSGAFG00000009369	hnrnpub	79	55.793	ENSCHIG00000004900	HNRNPU	75	53.891	Capra_hircus
ENSGAFG00000009369	hnrnpub	84	80.435	ENSCPOG00000011887	HNRNPU	62	80.435	Cavia_porcellus
ENSGAFG00000009369	hnrnpub	84	78.261	ENSCCAG00000037859	-	79	78.261	Cebus_capucinus
ENSGAFG00000009369	hnrnpub	88	59.211	ENSCATG00000035273	HNRNPU	79	78.261	Cercocebus_atys
ENSGAFG00000009369	hnrnpub	84	80.435	ENSCLAG00000007100	HNRNPU	62	80.435	Chinchilla_lanigera
ENSGAFG00000009369	hnrnpub	79	55.488	ENSCSAG00000009219	HNRNPU	75	53.744	Chlorocebus_sabaeus
ENSGAFG00000009369	hnrnpub	84	78.261	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSGAFG00000009369	hnrnpub	86	59.235	ENSCPBG00000009415	HNRNPU	78	70.588	Chrysemys_picta_bellii
ENSGAFG00000009369	hnrnpub	88	59.211	ENSCANG00000022780	HNRNPU	77	78.261	Colobus_angolensis_palliatus
ENSGAFG00000009369	hnrnpub	99	50.287	ENSCGRG00001020525	Hnrnpu	60	83.721	Cricetulus_griseus_chok1gshd
ENSGAFG00000009369	hnrnpub	100	75.829	ENSCSEG00000010804	hnrnpub	100	74.074	Cynoglossus_semilaevis
ENSGAFG00000009369	hnrnpub	93	76.366	ENSCVAG00000004280	hnrnpub	100	80.635	Cyprinodon_variegatus
ENSGAFG00000009369	hnrnpub	100	59.117	ENSDARG00000004735	hnrnpub	85	60.567	Danio_rerio
ENSGAFG00000009369	hnrnpub	78	63.110	ENSDARG00000015206	hnrnpua	84	57.637	Danio_rerio
ENSGAFG00000009369	hnrnpub	84	78.261	ENSDNOG00000000215	HNRNPU	69	78.261	Dasypus_novemcinctus
ENSGAFG00000009369	hnrnpub	79	55.793	ENSDORG00000015491	Hnrnpu	74	54.863	Dipodomys_ordii
ENSGAFG00000009369	hnrnpub	93	55.488	ENSETEG00000014565	HNRNPU	78	78.261	Echinops_telfairi
ENSGAFG00000009369	hnrnpub	80	55.472	ENSEASG00005003017	HNRNPU	58	64.468	Equus_asinus_asinus
ENSGAFG00000009369	hnrnpub	80	55.322	ENSECAG00000007955	HNRNPU	58	64.255	Equus_caballus
ENSGAFG00000009369	hnrnpub	100	69.204	ENSELUG00000010733	hnrnpub	85	73.066	Esox_lucius
ENSGAFG00000009369	hnrnpub	79	55.708	ENSFCAG00000002156	HNRNPU	74	54.038	Felis_catus
ENSGAFG00000009369	hnrnpub	89	80.435	ENSFDAG00000006026	HNRNPU	79	80.435	Fukomys_damarensis
ENSGAFG00000009369	hnrnpub	100	88.955	ENSFHEG00000022639	hnrnpub	100	84.304	Fundulus_heteroclitus
ENSGAFG00000009369	hnrnpub	100	70.657	ENSGMOG00000001755	hnrnpub	63	83.735	Gadus_morhua
ENSGAFG00000009369	hnrnpub	70	72.222	ENSGALG00000010671	HNRNPU	78	72.222	Gallus_gallus
ENSGAFG00000009369	hnrnpub	83	74.966	ENSGACG00000004679	hnrnpub	99	68.192	Gasterosteus_aculeatus
ENSGAFG00000009369	hnrnpub	85	55.055	ENSGGOG00000004061	HNRNPU	63	65.293	Gorilla_gorilla
ENSGAFG00000009369	hnrnpub	100	80.072	ENSHBUG00000012290	hnrnpub	100	80.502	Haplochromis_burtoni
ENSGAFG00000009369	hnrnpub	84	80.435	ENSHGLG00000010594	-	60	80.435	Heterocephalus_glaber_female
ENSGAFG00000009369	hnrnpub	89	80.435	ENSHGLG00100015093	HNRNPU	78	80.435	Heterocephalus_glaber_male
ENSGAFG00000009369	hnrnpub	100	71.071	ENSHCOG00000020091	hnrnpub	83	75.714	Hippocampus_comes
ENSGAFG00000009369	hnrnpub	76	91.489	ENSIPUG00000007749	hnrnpu	80	83.636	Ictalurus_punctatus
ENSGAFG00000009369	hnrnpub	84	83.721	ENSJJAG00000011371	Hnrnpu	81	63.492	Jaculus_jaculus
ENSGAFG00000009369	hnrnpub	100	81.591	ENSKMAG00000004532	hnrnpub	84	86.083	Kryptolebias_marmoratus
ENSGAFG00000009369	hnrnpub	83	86.023	ENSLBEG00000022520	hnrnpub	100	79.216	Labrus_bergylta
ENSGAFG00000009369	hnrnpub	99	46.682	ENSLACG00000017463	HNRNPU	72	60.300	Latimeria_chalumnae
ENSGAFG00000009369	hnrnpub	87	93.617	ENSLOCG00000016652	hnrnpua	78	93.617	Lepisosteus_oculatus
ENSGAFG00000009369	hnrnpub	99	49.942	ENSLAFG00000021377	HNRNPU	62	78.261	Loxodonta_africana
ENSGAFG00000009369	hnrnpub	88	59.211	ENSMFAG00000037308	HNRNPU	79	78.261	Macaca_fascicularis
ENSGAFG00000009369	hnrnpub	79	55.488	ENSMMUG00000021098	HNRNPU	76	53.744	Macaca_mulatta
ENSGAFG00000009369	hnrnpub	88	59.211	ENSMNEG00000043645	HNRNPU	79	78.261	Macaca_nemestrina
ENSGAFG00000009369	hnrnpub	100	82.134	ENSMAMG00000007196	hnrnpub	85	87.608	Mastacembelus_armatus
ENSGAFG00000009369	hnrnpub	100	79.712	ENSMZEG00005003185	hnrnpub	100	80.144	Maylandia_zebra
ENSGAFG00000009369	hnrnpub	90	58.667	ENSMAUG00000008842	Hnrnpu	62	83.721	Mesocricetus_auratus
ENSGAFG00000009369	hnrnpub	99	50.461	ENSMICG00000004616	HNRNPU	86	52.424	Microcebus_murinus
ENSGAFG00000009369	hnrnpub	86	83.721	ENSMOCG00000015623	Hnrnpu	62	83.721	Microtus_ochrogaster
ENSGAFG00000009369	hnrnpub	84	78.261	ENSMODG00000006515	HNRNPU	62	78.261	Monodelphis_domestica
ENSGAFG00000009369	hnrnpub	96	80.875	ENSMALG00000018243	hnrnpub	83	86.515	Monopterus_albus
ENSGAFG00000009369	hnrnpub	79	56.317	MGP_CAROLIEiJ_G0014962	Hnrnpu	59	64.043	Mus_caroli
ENSGAFG00000009369	hnrnpub	79	56.317	ENSMUSG00000039630	Hnrnpu	59	64.043	Mus_musculus
ENSGAFG00000009369	hnrnpub	79	55.690	MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	Mus_pahari
ENSGAFG00000009369	hnrnpub	79	56.317	MGP_SPRETEiJ_G0015761	Hnrnpu	59	64.043	Mus_spretus
ENSGAFG00000009369	hnrnpub	84	76.087	ENSMLUG00000000475	HNRNPU	63	76.087	Myotis_lucifugus
ENSGAFG00000009369	hnrnpub	99	50.115	ENSNGAG00000019075	Hnrnpu	59	64.043	Nannospalax_galili
ENSGAFG00000009369	hnrnpub	100	79.712	ENSNBRG00000017855	hnrnpub	100	80.144	Neolamprologus_brichardi
ENSGAFG00000009369	hnrnpub	76	78.261	ENSMEUG00000000541	HNRNPU	62	78.261	Notamacropus_eugenii
ENSGAFG00000009369	hnrnpub	76	78.261	ENSOCUG00000014469	HNRNPU	59	78.261	Oryctolagus_cuniculus
ENSGAFG00000009369	hnrnpub	100	80.072	ENSORLG00000016114	hnrnpub	100	80.072	Oryzias_latipes
ENSGAFG00000009369	hnrnpub	100	80.312	ENSORLG00020005363	hnrnpub	100	80.312	Oryzias_latipes_hni
ENSGAFG00000009369	hnrnpub	100	80.096	ENSORLG00015001190	hnrnpub	100	80.216	Oryzias_latipes_hsok
ENSGAFG00000009369	hnrnpub	100	75.750	ENSOMEG00000014951	hnrnpub	100	80.432	Oryzias_melastigma
ENSGAFG00000009369	hnrnpub	99	50.171	ENSOGAG00000014024	HNRNPU	75	53.891	Otolemur_garnettii
ENSGAFG00000009369	hnrnpub	86	63.077	ENSOARG00000004985	HNRNPU	71	65.000	Ovis_aries
ENSGAFG00000009369	hnrnpub	84	78.261	ENSPPAG00000038652	HNRNPU	79	78.261	Pan_paniscus
ENSGAFG00000009369	hnrnpub	87	78.261	ENSPPRG00000002662	HNRNPU	78	78.261	Panthera_pardus
ENSGAFG00000009369	hnrnpub	84	78.261	ENSPTRG00000002182	HNRNPU	79	78.261	Pan_troglodytes
ENSGAFG00000009369	hnrnpub	85	54.446	ENSPANG00000011643	HNRNPU	76	53.744	Papio_anubis
ENSGAFG00000009369	hnrnpub	100	64.133	ENSPKIG00000006885	hnrnpua	82	67.388	Paramormyrops_kingsleyae
ENSGAFG00000009369	hnrnpub	100	63.690	ENSPKIG00000022332	hnrnpub	61	73.101	Paramormyrops_kingsleyae
ENSGAFG00000009369	hnrnpub	76	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSGAFG00000009369	hnrnpub	100	97.232	ENSPFOG00000002908	hnrnpub	100	97.232	Poecilia_formosa
ENSGAFG00000009369	hnrnpub	100	97.112	ENSPLAG00000004160	hnrnpub	100	97.112	Poecilia_latipinna
ENSGAFG00000009369	hnrnpub	99	49.885	ENSPCOG00000018655	-	70	65.924	Propithecus_coquereli
ENSGAFG00000009369	hnrnpub	79	53.823	ENSPCOG00000003883	-	59	63.169	Propithecus_coquereli
ENSGAFG00000009369	hnrnpub	84	78.261	ENSPVAG00000002581	HNRNPU	79	78.261	Pteropus_vampyrus
ENSGAFG00000009369	hnrnpub	100	79.952	ENSPNYG00000021642	hnrnpub	100	80.383	Pundamilia_nyererei
ENSGAFG00000009369	hnrnpub	100	63.615	ENSPNAG00000001055	hnrnpub	100	60.400	Pygocentrus_nattereri
ENSGAFG00000009369	hnrnpub	79	56.317	ENSRNOG00000033790	Hnrnpu	58	64.592	Rattus_norvegicus
ENSGAFG00000009369	hnrnpub	99	49.597	ENSRBIG00000031519	HNRNPU	76	53.157	Rhinopithecus_bieti
ENSGAFG00000009369	hnrnpub	99	48.919	ENSRROG00000041642	HNRNPU	75	53.744	Rhinopithecus_roxellana
ENSGAFG00000009369	hnrnpub	100	64.505	ENSSFOG00015019004	hnrnpu	81	67.677	Scleropages_formosus
ENSGAFG00000009369	hnrnpub	100	65.125	ENSSFOG00015001124	hnrnpub	82	68.110	Scleropages_formosus
ENSGAFG00000009369	hnrnpub	83	84.870	ENSSMAG00000003607	hnrnpub	82	85.036	Scophthalmus_maximus
ENSGAFG00000009369	hnrnpub	100	79.857	ENSSDUG00000005912	hnrnpub	100	82.796	Seriola_dumerili
ENSGAFG00000009369	hnrnpub	100	80.765	ENSSLDG00000004899	hnrnpub	100	80.641	Seriola_lalandi_dorsalis
ENSGAFG00000009369	hnrnpub	81	55.769	ENSSPUG00000011393	HNRNPU	74	54.734	Sphenodon_punctatus
ENSGAFG00000009369	hnrnpub	100	81.513	ENSSPAG00000011853	hnrnpub	100	81.753	Stegastes_partitus
ENSGAFG00000009369	hnrnpub	87	59.459	ENSSSCG00000010877	HNRNPU	62	78.261	Sus_scrofa
ENSGAFG00000009369	hnrnpub	100	76.766	ENSTRUG00000007759	hnrnpub	100	74.762	Takifugu_rubripes
ENSGAFG00000009369	hnrnpub	100	70.188	ENSTNIG00000009725	hnrnpub	99	76.934	Tetraodon_nigroviridis
ENSGAFG00000009369	hnrnpub	84	78.261	ENSUAMG00000021120	HNRNPU	62	78.261	Ursus_americanus
ENSGAFG00000009369	hnrnpub	84	70.213	ENSUMAG00000012322	HNRNPU	84	70.213	Ursus_maritimus
ENSGAFG00000009369	hnrnpub	78	78.261	ENSVPAG00000010520	HNRNPU	82	78.261	Vicugna_pacos
ENSGAFG00000009369	hnrnpub	79	55.793	ENSVVUG00000026524	HNRNPU	72	64.468	Vulpes_vulpes
ENSGAFG00000009369	hnrnpub	99	48.284	ENSXETG00000011386	hnrnpu	59	61.966	Xenopus_tropicalis
ENSGAFG00000009369	hnrnpub	100	96.999	ENSXMAG00000010356	hnrnpub	100	96.999	Xiphophorus_maculatus