EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009373 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: zgc:123010
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 9954 bases
Position: chrNHOQ01001229.1:11309636-11319589
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013870	RRM_1	PF00076.22	8.8e-17	1	1
ENSGAFP00000013874	RRM_1	PF00076.22	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014018	-	3541	-	ENSGAFP00000013874	488 (aa)	-	-
ENSGAFT00000014014	-	3619	-	ENSGAFP00000013870	514 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009373	zgc:123010	62	41.250	ENSGAFG00000017596	si:dkey-33c12.4	50	33.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009373	zgc:123010	82	30.625	ENSAPOG00000005058	si:dkey-33c12.4	66	30.735	Acanthochromis_polyacanthus
ENSGAFG00000009373	zgc:123010	52	39.437	ENSAPOG00000022403	-	60	30.155	Acanthochromis_polyacanthus
ENSGAFG00000009373	zgc:123010	100	84.363	ENSAPOG00000019633	zgc:123010	100	84.363	Acanthochromis_polyacanthus
ENSGAFG00000009373	zgc:123010	80	50.591	ENSAPOG00000001034	-	83	54.000	Acanthochromis_polyacanthus
ENSGAFG00000009373	zgc:123010	69	83.944	ENSACIG00000021684	zgc:123010	89	83.944	Amphilophus_citrinellus
ENSGAFG00000009373	zgc:123010	100	85.135	ENSAOCG00000005910	zgc:123010	100	85.135	Amphiprion_ocellaris
ENSGAFG00000009373	zgc:123010	52	31.045	ENSAOCG00000000431	-	63	42.857	Amphiprion_ocellaris
ENSGAFG00000009373	zgc:123010	58	38.857	ENSAOCG00000020066	si:dkey-33c12.4	64	30.222	Amphiprion_ocellaris
ENSGAFG00000009373	zgc:123010	100	85.135	ENSAPEG00000014305	zgc:123010	100	85.135	Amphiprion_percula
ENSGAFG00000009373	zgc:123010	52	30.588	ENSAPEG00000023603	-	62	42.857	Amphiprion_percula
ENSGAFG00000009373	zgc:123010	100	81.660	ENSATEG00000001220	zgc:123010	100	81.660	Anabas_testudineus
ENSGAFG00000009373	zgc:123010	99	50.864	ENSATEG00000022160	-	100	49.333	Anabas_testudineus
ENSGAFG00000009373	zgc:123010	58	41.714	ENSATEG00000018885	si:dkey-33c12.4	58	33.933	Anabas_testudineus
ENSGAFG00000009373	zgc:123010	99	49.715	ENSACLG00000012346	-	100	49.245	Astatotilapia_calliptera
ENSGAFG00000009373	zgc:123010	55	42.236	ENSACLG00000014192	si:dkey-33c12.4	59	32.051	Astatotilapia_calliptera
ENSGAFG00000009373	zgc:123010	100	81.238	ENSACLG00000010188	zgc:123010	100	81.238	Astatotilapia_calliptera
ENSGAFG00000009373	zgc:123010	100	63.636	ENSAMXG00000041967	zgc:123010	100	64.193	Astyanax_mexicanus
ENSGAFG00000009373	zgc:123010	68	33.495	ENSAMXG00000010871	si:dkey-33c12.4	64	34.709	Astyanax_mexicanus
ENSGAFG00000009373	zgc:123010	57	37.725	ENSCPBG00000024454	-	60	31.667	Chrysemys_picta_bellii
ENSGAFG00000009373	zgc:123010	80	74.396	ENSCSEG00000006468	zgc:123010	67	73.671	Cynoglossus_semilaevis
ENSGAFG00000009373	zgc:123010	100	92.636	ENSCVAG00000013288	zgc:123010	100	92.636	Cyprinodon_variegatus
ENSGAFG00000009373	zgc:123010	85	31.115	ENSDARG00000057890	si:dkey-33c12.4	82	31.354	Danio_rerio
ENSGAFG00000009373	zgc:123010	92	58.038	ENSDARG00000039082	zgc:123010	98	62.917	Danio_rerio
ENSGAFG00000009373	zgc:123010	59	36.202	ENSEBUG00000001368	-	58	36.202	Eptatretus_burgeri
ENSGAFG00000009373	zgc:123010	68	31.206	ENSELUG00000001633	-	64	31.206	Esox_lucius
ENSGAFG00000009373	zgc:123010	89	31.492	ENSELUG00000002009	si:dkey-33c12.4	88	34.169	Esox_lucius
ENSGAFG00000009373	zgc:123010	100	50.947	ENSELUG00000021447	-	100	54.080	Esox_lucius
ENSGAFG00000009373	zgc:123010	100	65.643	ENSELUG00000022008	zgc:123010	100	66.095	Esox_lucius
ENSGAFG00000009373	zgc:123010	83	38.596	ENSFHEG00000005521	si:dkey-33c12.4	62	32.297	Fundulus_heteroclitus
ENSGAFG00000009373	zgc:123010	100	89.729	ENSFHEG00000002306	zgc:123010	100	89.729	Fundulus_heteroclitus
ENSGAFG00000009373	zgc:123010	72	78.342	ENSGMOG00000018473	zgc:123010	100	78.342	Gadus_morhua
ENSGAFG00000009373	zgc:123010	52	35.333	ENSGALG00000036747	TTC31	57	35.333	Gallus_gallus
ENSGAFG00000009373	zgc:123010	72	82.842	ENSGACG00000007620	zgc:123010	100	82.842	Gasterosteus_aculeatus
ENSGAFG00000009373	zgc:123010	63	35.061	ENSGACG00000004936	-	97	35.061	Gasterosteus_aculeatus
ENSGAFG00000009373	zgc:123010	55	42.236	ENSHBUG00000010735	si:dkey-33c12.4	56	32.723	Haplochromis_burtoni
ENSGAFG00000009373	zgc:123010	99	50.000	ENSHBUG00000016720	-	100	49.336	Haplochromis_burtoni
ENSGAFG00000009373	zgc:123010	85	31.014	ENSIPUG00000005998	si:dkey-33c12.4	64	35.122	Ictalurus_punctatus
ENSGAFG00000009373	zgc:123010	56	42.949	ENSKMAG00000016610	si:dkey-33c12.4	66	33.621	Kryptolebias_marmoratus
ENSGAFG00000009373	zgc:123010	100	83.430	ENSKMAG00000021350	zgc:123010	100	83.430	Kryptolebias_marmoratus
ENSGAFG00000009373	zgc:123010	54	41.558	ENSLBEG00000021088	-	67	31.481	Labrus_bergylta
ENSGAFG00000009373	zgc:123010	99	51.336	ENSLBEG00000013518	-	100	51.336	Labrus_bergylta
ENSGAFG00000009373	zgc:123010	100	81.165	ENSLBEG00000023984	zgc:123010	100	81.165	Labrus_bergylta
ENSGAFG00000009373	zgc:123010	91	31.450	ENSLACG00000004602	-	72	35.036	Latimeria_chalumnae
ENSGAFG00000009373	zgc:123010	85	51.209	ENSLACG00000009001	zgc:123010	80	58.583	Latimeria_chalumnae
ENSGAFG00000009373	zgc:123010	87	36.842	ENSLOCG00000001861	-	79	31.667	Lepisosteus_oculatus
ENSGAFG00000009373	zgc:123010	100	58.077	ENSLOCG00000008967	zgc:123010	100	57.471	Lepisosteus_oculatus
ENSGAFG00000009373	zgc:123010	64	55.856	ENSMAMG00000003439	-	97	53.740	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	69	58.774	ENSMAMG00000002460	-	86	58.774	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	64	54.706	ENSMAMG00000003394	-	91	54.706	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	63	39.037	ENSMAMG00000000111	si:dkey-33c12.4	58	32.642	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	69	58.774	ENSMAMG00000002377	-	82	58.774	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	71	80.220	ENSMAMG00000001145	zgc:123010	87	80.220	Mastacembelus_armatus
ENSGAFG00000009373	zgc:123010	69	55.978	ENSMZEG00005014740	-	91	55.978	Maylandia_zebra
ENSGAFG00000009373	zgc:123010	55	42.236	ENSMZEG00005014276	si:dkey-33c12.4	56	32.637	Maylandia_zebra
ENSGAFG00000009373	zgc:123010	100	81.238	ENSMZEG00005027733	zgc:123010	100	81.238	Maylandia_zebra
ENSGAFG00000009373	zgc:123010	71	50.928	ENSMMOG00000017955	-	99	47.494	Mola_mola
ENSGAFG00000009373	zgc:123010	91	71.702	ENSMMOG00000010544	zgc:123010	100	74.098	Mola_mola
ENSGAFG00000009373	zgc:123010	53	40.136	ENSMALG00000002265	si:dkey-33c12.4	60	31.795	Monopterus_albus
ENSGAFG00000009373	zgc:123010	50	31.402	ENSMALG00000003167	-	59	30.334	Monopterus_albus
ENSGAFG00000009373	zgc:123010	100	80.695	ENSMALG00000017698	zgc:123010	100	80.695	Monopterus_albus
ENSGAFG00000009373	zgc:123010	94	68.724	ENSNBRG00000021157	zgc:123010	100	68.724	Neolamprologus_brichardi
ENSGAFG00000009373	zgc:123010	94	79.226	ENSONIG00000018353	zgc:123010	100	79.226	Oreochromis_niloticus
ENSGAFG00000009373	zgc:123010	52	39.024	ENSONIG00000007538	-	98	37.692	Oreochromis_niloticus
ENSGAFG00000009373	zgc:123010	60	35.535	ENSONIG00000012263	-	99	36.254	Oreochromis_niloticus
ENSGAFG00000009373	zgc:123010	58	56.954	ENSONIG00000000297	-	100	56.954	Oreochromis_niloticus
ENSGAFG00000009373	zgc:123010	71	36.735	ENSORLG00000030385	-	57	36.735	Oryzias_latipes
ENSGAFG00000009373	zgc:123010	91	77.426	ENSORLG00000007675	zgc:123010	100	77.426	Oryzias_latipes
ENSGAFG00000009373	zgc:123010	54	40.625	ENSORLG00000029651	si:dkey-33c12.4	60	30.649	Oryzias_latipes
ENSGAFG00000009373	zgc:123010	53	41.026	ENSORLG00020008750	si:dkey-33c12.4	56	30.649	Oryzias_latipes_hni
ENSGAFG00000009373	zgc:123010	91	77.215	ENSORLG00020003457	zgc:123010	100	77.215	Oryzias_latipes_hni
ENSGAFG00000009373	zgc:123010	100	79.110	ENSORLG00015008373	zgc:123010	100	79.110	Oryzias_latipes_hsok
ENSGAFG00000009373	zgc:123010	71	36.735	ENSORLG00015008400	-	73	30.342	Oryzias_latipes_hsok
ENSGAFG00000009373	zgc:123010	100	80.464	ENSOMEG00000003408	zgc:123010	100	80.464	Oryzias_melastigma
ENSGAFG00000009373	zgc:123010	71	36.735	ENSOMEG00000009428	-	74	30.233	Oryzias_melastigma
ENSGAFG00000009373	zgc:123010	68	33.190	ENSOMEG00000008913	-	57	32.963	Oryzias_melastigma
ENSGAFG00000009373	zgc:123010	100	54.319	ENSPKIG00000015521	zgc:123010	99	55.864	Paramormyrops_kingsleyae
ENSGAFG00000009373	zgc:123010	88	32.879	ENSPKIG00000011819	-	69	33.187	Paramormyrops_kingsleyae
ENSGAFG00000009373	zgc:123010	80	67.669	ENSPMGG00000020251	zgc:123010	100	62.946	Periophthalmus_magnuspinnatus
ENSGAFG00000009373	zgc:123010	57	45.638	ENSPMAG00000004544	zgc:123010	100	45.638	Petromyzon_marinus
ENSGAFG00000009373	zgc:123010	59	39.205	ENSPFOG00000009143	si:dkey-33c12.4	56	32.041	Poecilia_formosa
ENSGAFG00000009373	zgc:123010	100	97.471	ENSPFOG00000001073	zgc:123010	100	97.471	Poecilia_formosa
ENSGAFG00000009373	zgc:123010	100	97.471	ENSPLAG00000007711	zgc:123010	100	97.471	Poecilia_latipinna
ENSGAFG00000009373	zgc:123010	59	39.205	ENSPLAG00000022537	si:dkey-33c12.4	58	32.041	Poecilia_latipinna
ENSGAFG00000009373	zgc:123010	100	97.276	ENSPMEG00000005092	zgc:123010	100	97.276	Poecilia_mexicana
ENSGAFG00000009373	zgc:123010	60	38.674	ENSPMEG00000015590	si:dkey-33c12.4	56	31.266	Poecilia_mexicana
ENSGAFG00000009373	zgc:123010	69	82.254	ENSPREG00000019587	zgc:123010	79	82.254	Poecilia_reticulata
ENSGAFG00000009373	zgc:123010	69	53.316	ENSPNYG00000023304	-	96	49.057	Pundamilia_nyererei
ENSGAFG00000009373	zgc:123010	55	42.236	ENSPNYG00000018262	si:dkey-33c12.4	56	32.637	Pundamilia_nyererei
ENSGAFG00000009373	zgc:123010	100	81.395	ENSPNYG00000007893	zgc:123010	100	81.395	Pundamilia_nyererei
ENSGAFG00000009373	zgc:123010	100	66.344	ENSPNAG00000007579	zgc:123010	100	66.344	Pygocentrus_nattereri
ENSGAFG00000009373	zgc:123010	63	41.228	ENSPNAG00000018386	si:dkey-33c12.4	82	30.037	Pygocentrus_nattereri
ENSGAFG00000009373	zgc:123010	100	57.170	ENSSFOG00015021394	zgc:123010	99	56.604	Scleropages_formosus
ENSGAFG00000009373	zgc:123010	68	31.415	ENSSFOG00015009199	-	66	31.415	Scleropages_formosus
ENSGAFG00000009373	zgc:123010	67	34.565	ENSSFOG00015005186	-	63	34.635	Scleropages_formosus
ENSGAFG00000009373	zgc:123010	99	48.738	ENSSMAG00000021096	-	97	48.659	Scophthalmus_maximus
ENSGAFG00000009373	zgc:123010	100	81.538	ENSSMAG00000002904	zgc:123010	100	81.538	Scophthalmus_maximus
ENSGAFG00000009373	zgc:123010	81	32.743	ENSSMAG00000008147	si:dkey-33c12.4	66	32.743	Scophthalmus_maximus
ENSGAFG00000009373	zgc:123010	63	37.688	ENSSDUG00000003213	si:dkey-33c12.4	62	31.633	Seriola_dumerili
ENSGAFG00000009373	zgc:123010	99	53.743	ENSSDUG00000014026	-	100	54.598	Seriola_dumerili
ENSGAFG00000009373	zgc:123010	56	32.459	ENSSDUG00000010976	-	50	30.449	Seriola_dumerili
ENSGAFG00000009373	zgc:123010	100	84.363	ENSSDUG00000008651	zgc:123010	100	84.363	Seriola_dumerili
ENSGAFG00000009373	zgc:123010	100	84.363	ENSSLDG00000019386	zgc:123010	100	84.363	Seriola_lalandi_dorsalis
ENSGAFG00000009373	zgc:123010	62	37.186	ENSSLDG00000009448	si:dkey-33c12.4	56	35.398	Seriola_lalandi_dorsalis
ENSGAFG00000009373	zgc:123010	56	32.787	ENSSLDG00000012846	-	52	31.310	Seriola_lalandi_dorsalis
ENSGAFG00000009373	zgc:123010	60	33.609	ENSSPAG00000022577	-	55	33.421	Stegastes_partitus
ENSGAFG00000009373	zgc:123010	100	85.135	ENSSPAG00000013621	zgc:123010	100	85.135	Stegastes_partitus
ENSGAFG00000009373	zgc:123010	69	36.250	ENSSPAG00000004843	-	58	36.250	Stegastes_partitus
ENSGAFG00000009373	zgc:123010	74	30.424	ENSTRUG00000000057	-	60	34.579	Takifugu_rubripes
ENSGAFG00000009373	zgc:123010	56	39.130	ENSTRUG00000022374	si:dkey-33c12.4	51	31.742	Takifugu_rubripes
ENSGAFG00000009373	zgc:123010	100	70.270	ENSTRUG00000024824	zgc:123010	100	68.726	Takifugu_rubripes
ENSGAFG00000009373	zgc:123010	63	35.366	ENSTNIG00000010542	-	96	36.250	Tetraodon_nigroviridis
ENSGAFG00000009373	zgc:123010	63	72.948	ENSTNIG00000001303	zgc:123010	100	72.948	Tetraodon_nigroviridis
ENSGAFG00000009373	zgc:123010	58	52.349	ENSXETG00000033896	-	99	52.349	Xenopus_tropicalis
ENSGAFG00000009373	zgc:123010	70	86.792	ENSXCOG00000012281	zgc:123010	83	87.705	Xiphophorus_couchianus
ENSGAFG00000009373	zgc:123010	100	97.670	ENSXMAG00000002598	zgc:123010	100	97.670	Xiphophorus_maculatus