EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009426 (Gene tree)
Gene ID: -
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family%2C member 6a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8937 bases
Position: chrNHOQ01000682.1:2524345-2533281
Accession: ZDB-GENE-030131-6403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000013949	La	PF05383.17	1.5e-18	1	1
ENSGAFP00000013947	La	PF05383.17	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014093	-	5108	-	ENSGAFP00000013949	664 (aa)	-	-
ENSGAFT00000014091	-	5171	-	ENSGAFP00000013947	685 (aa)	-	UPI000DD20F04

Gene Model

Click here to download ENSGAFG00000009426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009426	larp6a	60	31.250	ENSGAFG00000020138	-	84	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009426	larp6a	65	58.969	ENSG00000166173	LARP6	87	58.969	Homo_sapiens
ENSGAFG00000009426	larp6a	100	85.838	ENSAPOG00000021773	larp6a	100	85.838	Acanthochromis_polyacanthus
ENSGAFG00000009426	larp6a	63	60.277	ENSAMEG00000008897	LARP6	97	60.277	Ailuropoda_melanoleuca
ENSGAFG00000009426	larp6a	74	91.468	ENSACIG00000005166	larp6a	100	91.468	Amphilophus_citrinellus
ENSGAFG00000009426	larp6a	100	85.797	ENSAOCG00000002284	larp6a	100	85.797	Amphiprion_ocellaris
ENSGAFG00000009426	larp6a	75	91.423	ENSAPEG00000008077	larp6a	100	91.423	Amphiprion_percula
ENSGAFG00000009426	larp6a	100	83.238	ENSATEG00000004018	larp6a	100	83.524	Anabas_testudineus
ENSGAFG00000009426	larp6a	62	59.813	ENSAPLG00000009914	LARP6	98	59.813	Anas_platyrhynchos
ENSGAFG00000009426	larp6a	63	59.574	ENSACAG00000008613	LARP6	99	59.579	Anolis_carolinensis
ENSGAFG00000009426	larp6a	65	59.193	ENSANAG00000024860	LARP6	87	59.193	Aotus_nancymaae
ENSGAFG00000009426	larp6a	100	83.745	ENSACLG00000018561	larp6a	97	83.890	Astatotilapia_calliptera
ENSGAFG00000009426	larp6a	63	40.093	ENSAMXG00000036816	-	94	41.492	Astyanax_mexicanus
ENSGAFG00000009426	larp6a	77	78.947	ENSAMXG00000029387	larp6a	100	61.878	Astyanax_mexicanus
ENSGAFG00000009426	larp6a	65	60.090	ENSBTAG00000003915	LARP6	87	60.090	Bos_taurus
ENSGAFG00000009426	larp6a	67	56.495	ENSCJAG00000046236	-	87	58.427	Callithrix_jacchus
ENSGAFG00000009426	larp6a	65	58.876	ENSCJAG00000018642	-	87	58.876	Callithrix_jacchus
ENSGAFG00000009426	larp6a	63	60.046	ENSCAFG00000017616	LARP6	99	59.453	Canis_familiaris
ENSGAFG00000009426	larp6a	65	59.375	ENSCAFG00020007296	LARP6	88	59.375	Canis_lupus_dingo
ENSGAFG00000009426	larp6a	65	60.090	ENSCHIG00000013742	LARP6	87	60.090	Capra_hircus
ENSGAFG00000009426	larp6a	64	58.314	ENSTSYG00000028124	LARP6	86	58.314	Carlito_syrichta
ENSGAFG00000009426	larp6a	62	59.016	ENSCAPG00000015452	LARP6	97	59.016	Cavia_aperea
ENSGAFG00000009426	larp6a	68	56.212	ENSCPOG00000022687	LARP6	87	58.427	Cavia_porcellus
ENSGAFG00000009426	larp6a	65	59.193	ENSCCAG00000036320	LARP6	87	59.193	Cebus_capucinus
ENSGAFG00000009426	larp6a	65	58.969	ENSCATG00000042432	LARP6	87	58.969	Cercocebus_atys
ENSGAFG00000009426	larp6a	66	58.590	ENSCLAG00000007893	LARP6	97	56.364	Chinchilla_lanigera
ENSGAFG00000009426	larp6a	65	58.969	ENSCSAG00000013672	LARP6	87	58.969	Chlorocebus_sabaeus
ENSGAFG00000009426	larp6a	65	58.744	ENSCHOG00000003318	LARP6	90	58.744	Choloepus_hoffmanni
ENSGAFG00000009426	larp6a	67	60.510	ENSCPBG00000010771	LARP6	88	60.510	Chrysemys_picta_bellii
ENSGAFG00000009426	larp6a	63	59.397	ENSCANG00000025833	LARP6	98	59.397	Colobus_angolensis_palliatus
ENSGAFG00000009426	larp6a	65	59.598	ENSCGRG00001024472	Larp6	87	59.598	Cricetulus_griseus_chok1gshd
ENSGAFG00000009426	larp6a	65	59.598	ENSCGRG00000004527	Larp6	87	59.598	Cricetulus_griseus_crigri
ENSGAFG00000009426	larp6a	91	83.013	ENSCSEG00000011196	larp6a	96	82.344	Cynoglossus_semilaevis
ENSGAFG00000009426	larp6a	100	89.535	ENSCVAG00000009605	larp6a	100	89.535	Cyprinodon_variegatus
ENSGAFG00000009426	larp6a	68	82.819	ENSDARG00000005355	larp6a	99	83.141	Danio_rerio
ENSGAFG00000009426	larp6a	65	58.465	ENSDNOG00000042993	LARP6	87	58.465	Dasypus_novemcinctus
ENSGAFG00000009426	larp6a	67	54.959	ENSDORG00000023910	Larp6	88	58.667	Dipodomys_ordii
ENSGAFG00000009426	larp6a	65	59.641	ENSEASG00005005490	LARP6	64	59.641	Equus_asinus_asinus
ENSGAFG00000009426	larp6a	65	59.865	ENSECAG00000014190	LARP6	96	58.929	Equus_caballus
ENSGAFG00000009426	larp6a	100	72.675	ENSELUG00000007341	larp6a	100	72.675	Esox_lucius
ENSGAFG00000009426	larp6a	65	58.520	ENSFCAG00000001361	LARP6	87	58.520	Felis_catus
ENSGAFG00000009426	larp6a	67	59.072	ENSFALG00000012389	LARP6	97	59.072	Ficedula_albicollis
ENSGAFG00000009426	larp6a	64	58.864	ENSFDAG00000019994	LARP6	83	58.864	Fukomys_damarensis
ENSGAFG00000009426	larp6a	100	92.117	ENSFHEG00000010312	larp6a	100	92.263	Fundulus_heteroclitus
ENSGAFG00000009426	larp6a	65	60.497	ENSGALG00000004046	LARP6	87	60.497	Gallus_gallus
ENSGAFG00000009426	larp6a	65	89.070	ENSGACG00000014622	larp6a	99	89.070	Gasterosteus_aculeatus
ENSGAFG00000009426	larp6a	62	59.039	ENSGAGG00000010802	LARP6	86	47.114	Gopherus_agassizii
ENSGAFG00000009426	larp6a	63	59.397	ENSGGOG00000024151	LARP6	98	59.397	Gorilla_gorilla
ENSGAFG00000009426	larp6a	100	83.745	ENSHBUG00000021014	larp6a	97	83.890	Haplochromis_burtoni
ENSGAFG00000009426	larp6a	65	60.090	ENSHGLG00000015112	LARP6	95	57.906	Heterocephalus_glaber_female
ENSGAFG00000009426	larp6a	63	60.325	ENSHGLG00100013159	LARP6	99	59.909	Heterocephalus_glaber_male
ENSGAFG00000009426	larp6a	72	85.859	ENSHCOG00000001241	larp6a	100	83.237	Hippocampus_comes
ENSGAFG00000009426	larp6a	100	64.205	ENSIPUG00000010187	larp6	100	65.341	Ictalurus_punctatus
ENSGAFG00000009426	larp6a	65	58.744	ENSSTOG00000024279	LARP6	93	58.744	Ictidomys_tridecemlineatus
ENSGAFG00000009426	larp6a	65	58.520	ENSJJAG00000011013	Larp6	96	56.352	Jaculus_jaculus
ENSGAFG00000009426	larp6a	100	80.389	ENSKMAG00000001702	larp6a	100	81.363	Kryptolebias_marmoratus
ENSGAFG00000009426	larp6a	75	86.745	ENSLBEG00000000170	larp6a	100	86.745	Labrus_bergylta
ENSGAFG00000009426	larp6a	74	60.542	ENSLACG00000018706	LARP6	96	60.735	Latimeria_chalumnae
ENSGAFG00000009426	larp6a	62	44.893	ENSLACG00000002786	-	95	45.972	Latimeria_chalumnae
ENSGAFG00000009426	larp6a	100	64.190	ENSLOCG00000014592	larp6a	100	64.110	Lepisosteus_oculatus
ENSGAFG00000009426	larp6a	62	43.794	ENSLOCG00000008547	-	80	45.626	Lepisosteus_oculatus
ENSGAFG00000009426	larp6a	65	59.417	ENSLAFG00000016343	LARP6	96	59.417	Loxodonta_africana
ENSGAFG00000009426	larp6a	65	58.969	ENSMFAG00000035507	LARP6	96	58.969	Macaca_fascicularis
ENSGAFG00000009426	larp6a	65	58.969	ENSMMUG00000004429	LARP6	90	58.969	Macaca_mulatta
ENSGAFG00000009426	larp6a	65	58.969	ENSMNEG00000045335	LARP6	87	58.969	Macaca_nemestrina
ENSGAFG00000009426	larp6a	63	59.397	ENSMLEG00000038587	LARP6	98	59.397	Mandrillus_leucophaeus
ENSGAFG00000009426	larp6a	100	83.671	ENSMAMG00000005261	larp6a	100	83.792	Mastacembelus_armatus
ENSGAFG00000009426	larp6a	100	83.890	ENSMZEG00005005774	larp6a	97	84.035	Maylandia_zebra
ENSGAFG00000009426	larp6a	62	61.827	ENSMGAG00000005077	LARP6	98	61.827	Meleagris_gallopavo
ENSGAFG00000009426	larp6a	65	58.744	ENSMAUG00000018486	Larp6	87	59.193	Mesocricetus_auratus
ENSGAFG00000009426	larp6a	65	58.296	ENSMICG00000011234	LARP6	95	56.405	Microcebus_murinus
ENSGAFG00000009426	larp6a	65	59.417	ENSMOCG00000010492	Larp6	87	59.417	Microtus_ochrogaster
ENSGAFG00000009426	larp6a	75	87.524	ENSMMOG00000016284	larp6a	100	87.524	Mola_mola
ENSGAFG00000009426	larp6a	65	56.854	ENSMODG00000009034	LARP6	83	57.079	Monodelphis_domestica
ENSGAFG00000009426	larp6a	74	88.889	ENSMALG00000014439	larp6a	98	88.889	Monopterus_albus
ENSGAFG00000009426	larp6a	65	59.193	MGP_CAROLIEiJ_G0032314	Larp6	89	58.811	Mus_caroli
ENSGAFG00000009426	larp6a	65	58.969	ENSMUSG00000034839	Larp6	88	58.590	Mus_musculus
ENSGAFG00000009426	larp6a	66	58.590	MGP_PahariEiJ_G0015180	Larp6	88	58.590	Mus_pahari
ENSGAFG00000009426	larp6a	65	59.193	MGP_SPRETEiJ_G0033452	Larp6	88	58.811	Mus_spretus
ENSGAFG00000009426	larp6a	63	59.677	ENSMPUG00000017086	LARP6	99	59.091	Mustela_putorius_furo
ENSGAFG00000009426	larp6a	65	58.876	ENSMLUG00000010319	LARP6	87	58.876	Myotis_lucifugus
ENSGAFG00000009426	larp6a	65	59.865	ENSNGAG00000014238	Larp6	87	59.865	Nannospalax_galili
ENSGAFG00000009426	larp6a	75	91.033	ENSNBRG00000008120	larp6a	100	91.033	Neolamprologus_brichardi
ENSGAFG00000009426	larp6a	65	58.969	ENSNLEG00000013691	LARP6	88	58.969	Nomascus_leucogenys
ENSGAFG00000009426	larp6a	54	65.385	ENSMEUG00000002270	LARP6	75	67.213	Notamacropus_eugenii
ENSGAFG00000009426	larp6a	53	55.890	ENSOPRG00000004868	-	99	55.890	Ochotona_princeps
ENSGAFG00000009426	larp6a	65	59.184	ENSODEG00000015958	LARP6	95	57.173	Octodon_degus
ENSGAFG00000009426	larp6a	75	90.291	ENSONIG00000002901	larp6a	100	90.291	Oreochromis_niloticus
ENSGAFG00000009426	larp6a	61	59.024	ENSOCUG00000009306	LARP6	97	59.338	Oryctolagus_cuniculus
ENSGAFG00000009426	larp6a	72	89.919	ENSORLG00000014256	larp6a	99	89.919	Oryzias_latipes
ENSGAFG00000009426	larp6a	100	83.866	ENSORLG00020019657	larp6a	100	83.866	Oryzias_latipes_hni
ENSGAFG00000009426	larp6a	100	84.593	ENSORLG00015017915	larp6a	100	84.593	Oryzias_latipes_hsok
ENSGAFG00000009426	larp6a	100	84.862	ENSOMEG00000017049	larp6a	100	84.862	Oryzias_melastigma
ENSGAFG00000009426	larp6a	65	58.145	ENSOGAG00000000522	LARP6	87	59.009	Otolemur_garnettii
ENSGAFG00000009426	larp6a	63	60.417	ENSOARG00000018750	LARP6	97	60.417	Ovis_aries
ENSGAFG00000009426	larp6a	63	59.397	ENSPPAG00000031247	LARP6	98	59.397	Pan_paniscus
ENSGAFG00000009426	larp6a	65	58.296	ENSPPRG00000011282	LARP6	87	58.296	Panthera_pardus
ENSGAFG00000009426	larp6a	63	59.397	ENSPTIG00000015318	LARP6	86	58.998	Panthera_tigris_altaica
ENSGAFG00000009426	larp6a	65	58.969	ENSPTRG00000007234	LARP6	87	58.969	Pan_troglodytes
ENSGAFG00000009426	larp6a	65	58.969	ENSPANG00000016362	LARP6	87	58.969	Papio_anubis
ENSGAFG00000009426	larp6a	100	62.464	ENSPKIG00000004511	LARP6	100	62.607	Paramormyrops_kingsleyae
ENSGAFG00000009426	larp6a	100	60.931	ENSPKIG00000020103	larp6a	89	75.053	Paramormyrops_kingsleyae
ENSGAFG00000009426	larp6a	71	91.411	ENSPMGG00000006958	larp6a	98	91.411	Periophthalmus_magnuspinnatus
ENSGAFG00000009426	larp6a	65	58.929	ENSPEMG00000012909	Larp6	87	58.929	Peromyscus_maniculatus_bairdii
ENSGAFG00000009426	larp6a	65	56.920	ENSPCIG00000020765	LARP6	83	57.143	Phascolarctos_cinereus
ENSGAFG00000009426	larp6a	75	96.893	ENSPFOG00000014175	larp6a	100	96.893	Poecilia_formosa
ENSGAFG00000009426	larp6a	100	94.509	ENSPLAG00000011105	larp6a	100	94.653	Poecilia_latipinna
ENSGAFG00000009426	larp6a	100	94.493	ENSPMEG00000011085	larp6a	100	94.783	Poecilia_mexicana
ENSGAFG00000009426	larp6a	100	94.323	ENSPREG00000008067	larp6a	100	94.614	Poecilia_reticulata
ENSGAFG00000009426	larp6a	65	58.969	ENSPPYG00000006604	LARP6	87	58.969	Pongo_abelii
ENSGAFG00000009426	larp6a	65	58.296	ENSPCOG00000022934	LARP6	87	58.296	Propithecus_coquereli
ENSGAFG00000009426	larp6a	65	59.865	ENSPVAG00000005618	LARP6	95	57.732	Pteropus_vampyrus
ENSGAFG00000009426	larp6a	75	90.643	ENSPNYG00000009835	larp6a	100	90.643	Pundamilia_nyererei
ENSGAFG00000009426	larp6a	72	77.193	ENSPNAG00000017966	larp6a	100	61.481	Pygocentrus_nattereri
ENSGAFG00000009426	larp6a	65	59.598	ENSRNOG00000012438	Larp6	87	59.598	Rattus_norvegicus
ENSGAFG00000009426	larp6a	70	56.522	ENSRBIG00000032902	LARP6	88	58.613	Rhinopithecus_bieti
ENSGAFG00000009426	larp6a	65	58.969	ENSRROG00000043074	LARP6	87	58.969	Rhinopithecus_roxellana
ENSGAFG00000009426	larp6a	63	59.629	ENSSBOG00000024190	LARP6	98	59.629	Saimiri_boliviensis_boliviensis
ENSGAFG00000009426	larp6a	64	54.920	ENSSHAG00000018495	LARP6	99	56.064	Sarcophilus_harrisii
ENSGAFG00000009426	larp6a	65	76.905	ENSSFOG00015023268	larp6a	95	72.690	Scleropages_formosus
ENSGAFG00000009426	larp6a	70	72.128	ENSSFOG00015002254	LARP6	98	69.882	Scleropages_formosus
ENSGAFG00000009426	larp6a	100	80.401	ENSSMAG00000009953	larp6a	100	81.116	Scophthalmus_maximus
ENSGAFG00000009426	larp6a	100	83.453	ENSSDUG00000007438	larp6a	100	83.453	Seriola_dumerili
ENSGAFG00000009426	larp6a	100	83.405	ENSSLDG00000016647	larp6a	100	83.405	Seriola_lalandi_dorsalis
ENSGAFG00000009426	larp6a	63	62.118	ENSSPUG00000011312	LARP6	98	62.118	Sphenodon_punctatus
ENSGAFG00000009426	larp6a	100	85.570	ENSSPAG00000020502	larp6a	100	85.570	Stegastes_partitus
ENSGAFG00000009426	larp6a	65	59.865	ENSSSCG00000004974	LARP6	87	59.865	Sus_scrofa
ENSGAFG00000009426	larp6a	62	60.280	ENSTGUG00000005808	LARP6	98	60.280	Taeniopygia_guttata
ENSGAFG00000009426	larp6a	100	75.362	ENSTRUG00000003151	larp6a	100	75.797	Takifugu_rubripes
ENSGAFG00000009426	larp6a	71	83.539	ENSTNIG00000011926	larp6a	100	83.539	Tetraodon_nigroviridis
ENSGAFG00000009426	larp6a	63	58.796	ENSTBEG00000015077	LARP6	98	58.796	Tupaia_belangeri
ENSGAFG00000009426	larp6a	63	60.277	ENSUAMG00000010467	LARP6	85	59.864	Ursus_americanus
ENSGAFG00000009426	larp6a	63	59.815	ENSVVUG00000015227	LARP6	94	59.226	Vulpes_vulpes
ENSGAFG00000009426	larp6a	68	63.067	ENSXETG00000020340	larp6	93	62.737	Xenopus_tropicalis
ENSGAFG00000009426	larp6a	70	98.283	ENSXCOG00000012654	larp6a	98	98.529	Xiphophorus_couchianus
ENSGAFG00000009426	larp6a	100	96.501	ENSXMAG00000021015	larp6a	96	96.501	Xiphophorus_maculatus