EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000009490 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-147l19.2
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5652 bases
Position: chrNHOQ01002094.1:3734017-3739668
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014033	RNA_pol_3_Rpc31	PF11705.8	1e-36	1	1
ENSGAFP00000014035	RNA_pol_3_Rpc31	PF11705.8	1e-36	1	1
ENSGAFP00000014032	RNA_pol_3_Rpc31	PF11705.8	2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014179	-	1509	-	ENSGAFP00000014035	214 (aa)	-	-
ENSGAFT00000014177	-	1264	-	ENSGAFP00000014033	214 (aa)	-	-
ENSGAFT00000014176	-	828	-	ENSGAFP00000014032	275 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009490	-	78	78.443	ENSAPOG00000011247	-	85	79.268	Acanthochromis_polyacanthus
ENSGAFG00000009490	-	100	63.594	ENSACIG00000007516	-	100	63.594	Amphilophus_citrinellus
ENSGAFG00000009490	-	100	78.505	ENSAOCG00000024467	-	100	78.505	Amphiprion_ocellaris
ENSGAFG00000009490	-	100	78.505	ENSAPEG00000016584	-	100	78.505	Amphiprion_percula
ENSGAFG00000009490	-	100	78.704	ENSATEG00000002207	-	98	77.434	Anabas_testudineus
ENSGAFG00000009490	-	100	62.844	ENSCSEG00000015309	-	100	61.927	Cynoglossus_semilaevis
ENSGAFG00000009490	-	100	89.720	ENSCVAG00000007423	-	100	89.720	Cyprinodon_variegatus
ENSGAFG00000009490	-	91	59.406	ENSGMOG00000017219	-	100	59.910	Gadus_morhua
ENSGAFG00000009490	-	100	64.035	ENSGACG00000010567	-	100	64.474	Gasterosteus_aculeatus
ENSGAFG00000009490	-	100	74.766	ENSHCOG00000019088	-	100	74.766	Hippocampus_comes
ENSGAFG00000009490	-	100	79.439	ENSKMAG00000007413	-	100	79.439	Kryptolebias_marmoratus
ENSGAFG00000009490	-	100	71.028	ENSLBEG00000022698	-	100	71.963	Labrus_bergylta
ENSGAFG00000009490	-	100	80.000	ENSMZEG00005013662	-	100	79.535	Maylandia_zebra
ENSGAFG00000009490	-	100	63.551	ENSMMOG00000005508	-	100	63.551	Mola_mola
ENSGAFG00000009490	-	100	75.342	ENSONIG00000011803	-	99	75.566	Oreochromis_niloticus
ENSGAFG00000009490	-	100	72.897	ENSORLG00000021873	-	99	72.889	Oryzias_latipes
ENSGAFG00000009490	-	100	72.897	ENSORLG00015022482	-	88	71.739	Oryzias_latipes_hsok
ENSGAFG00000009490	-	100	70.093	ENSOMEG00000007659	-	100	72.897	Oryzias_melastigma
ENSGAFG00000009490	-	100	75.745	ENSPFOG00000007520	-	87	94.578	Poecilia_formosa
ENSGAFG00000009490	-	100	93.925	ENSPLAG00000012172	-	100	93.925	Poecilia_latipinna
ENSGAFG00000009490	-	100	94.393	ENSPMEG00000017122	-	100	94.393	Poecilia_mexicana
ENSGAFG00000009490	-	75	93.125	ENSPREG00000005692	-	100	93.125	Poecilia_reticulata
ENSGAFG00000009490	-	77	76.970	ENSSMAG00000007987	-	82	74.302	Scophthalmus_maximus
ENSGAFG00000009490	-	100	80.841	ENSSDUG00000018449	-	100	80.841	Seriola_dumerili
ENSGAFG00000009490	-	100	80.374	ENSSLDG00000021071	-	100	80.374	Seriola_lalandi_dorsalis
ENSGAFG00000009490	-	100	79.439	ENSSPAG00000004432	-	100	79.439	Stegastes_partitus
ENSGAFG00000009490	-	100	69.626	ENSTRUG00000000973	-	100	70.561	Takifugu_rubripes
ENSGAFG00000009490	-	100	95.327	ENSXMAG00000023321	-	100	95.327	Xiphophorus_maculatus