EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10594 bases
Position: chrNHOQ01001000.1:9047419-9058012
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014078	RNase_Zc3h12a	PF11977.8	3.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014223	-	2490	-	ENSGAFP00000014078	540 (aa)	-	UPI000DD25659

Gene Model

Click here to download ENSGAFG00000009523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009523	-	99	38.448	ENSGAFG00000019001	si:dkey-206d17.12	95	38.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009523	-	53	62.329	ENSG00000163874	ZC3H12A	78	60.987	Homo_sapiens
ENSGAFG00000009523	-	99	69.123	ENSAPOG00000005848	-	95	70.053	Acanthochromis_polyacanthus
ENSGAFG00000009523	-	53	61.053	ENSAPOG00000001632	-	91	42.776	Acanthochromis_polyacanthus
ENSGAFG00000009523	-	56	60.897	ENSAMEG00000000991	ZC3H12A	52	60.897	Ailuropoda_melanoleuca
ENSGAFG00000009523	-	99	41.710	ENSACIG00000004135	si:dkey-206d17.12	80	55.217	Amphilophus_citrinellus
ENSGAFG00000009523	-	99	66.031	ENSACIG00000006790	-	92	83.108	Amphilophus_citrinellus
ENSGAFG00000009523	-	99	68.070	ENSAOCG00000009106	-	95	69.298	Amphiprion_ocellaris
ENSGAFG00000009523	-	54	58.252	ENSAOCG00000003866	-	87	55.187	Amphiprion_ocellaris
ENSGAFG00000009523	-	99	68.246	ENSAPEG00000004229	-	95	69.352	Amphiprion_percula
ENSGAFG00000009523	-	54	58.252	ENSAPEG00000005727	-	96	44.172	Amphiprion_percula
ENSGAFG00000009523	-	99	65.391	ENSATEG00000013053	-	82	86.404	Anabas_testudineus
ENSGAFG00000009523	-	55	56.721	ENSATEG00000006140	si:dkey-206d17.12	87	43.137	Anabas_testudineus
ENSGAFG00000009523	-	53	60.000	ENSATEG00000002260	-	83	57.872	Anabas_testudineus
ENSGAFG00000009523	-	53	63.140	ENSANAG00000009908	ZC3H12A	78	61.161	Aotus_nancymaae
ENSGAFG00000009523	-	99	66.899	ENSACLG00000018534	-	94	66.841	Astatotilapia_calliptera
ENSGAFG00000009523	-	99	51.478	ENSAMXG00000030754	-	99	50.957	Astyanax_mexicanus
ENSGAFG00000009523	-	54	61.074	ENSBTAG00000011316	ZC3H12A	51	61.074	Bos_taurus
ENSGAFG00000009523	-	54	61.074	ENSCAFG00000003304	ZC3H12A	51	61.074	Canis_familiaris
ENSGAFG00000009523	-	54	61.074	ENSCAFG00020008620	ZC3H12A	51	61.074	Canis_lupus_dingo
ENSGAFG00000009523	-	54	60.738	ENSCHIG00000021957	ZC3H12A	51	60.333	Capra_hircus
ENSGAFG00000009523	-	53	61.644	ENSCAPG00000015365	ZC3H12A	53	61.644	Cavia_aperea
ENSGAFG00000009523	-	53	60.959	ENSCPOG00000011081	ZC3H12A	53	60.959	Cavia_porcellus
ENSGAFG00000009523	-	53	62.671	ENSCATG00000037700	ZC3H12A	78	60.538	Cercocebus_atys
ENSGAFG00000009523	-	53	63.014	ENSCANG00000042287	ZC3H12A	78	60.987	Colobus_angolensis_palliatus
ENSGAFG00000009523	-	54	58.654	ENSCSEG00000010073	-	81	54.286	Cynoglossus_semilaevis
ENSGAFG00000009523	-	98	80.669	ENSCVAG00000001077	-	99	80.374	Cyprinodon_variegatus
ENSGAFG00000009523	-	55	55.446	ENSCVAG00000001516	si:dkey-206d17.12	91	39.273	Cyprinodon_variegatus
ENSGAFG00000009523	-	99	39.478	ENSCVAG00000017420	zc3h12a	97	39.379	Cyprinodon_variegatus
ENSGAFG00000009523	-	53	61.458	ENSDARG00000005271	zc3h12a	78	61.512	Danio_rerio
ENSGAFG00000009523	-	55	59.016	ENSDNOG00000035006	ZC3H12A	92	40.684	Dasypus_novemcinctus
ENSGAFG00000009523	-	53	62.329	ENSDORG00000012666	Zc3h12a	62	50.614	Dipodomys_ordii
ENSGAFG00000009523	-	55	47.541	ENSETEG00000018311	ZC3H12A	61	47.541	Echinops_telfairi
ENSGAFG00000009523	-	53	61.301	ENSEASG00005012220	ZC3H12A	50	61.301	Equus_asinus_asinus
ENSGAFG00000009523	-	51	61.620	ENSEEUG00000005907	ZC3H12A	55	61.620	Erinaceus_europaeus
ENSGAFG00000009523	-	57	56.013	ENSELUG00000007368	si:dkey-206d17.12	50	56.013	Esox_lucius
ENSGAFG00000009523	-	96	52.605	ENSELUG00000018728	-	89	51.926	Esox_lucius
ENSGAFG00000009523	-	53	59.016	ENSFHEG00000021225	-	82	47.682	Fundulus_heteroclitus
ENSGAFG00000009523	-	99	38.983	ENSFHEG00000001174	si:dkey-206d17.12	95	38.552	Fundulus_heteroclitus
ENSGAFG00000009523	-	99	77.148	ENSFHEG00000011425	-	99	77.331	Fundulus_heteroclitus
ENSGAFG00000009523	-	55	53.333	ENSGMOG00000017603	si:dkey-206d17.12	61	53.333	Gadus_morhua
ENSGAFG00000009523	-	54	53.642	ENSGMOG00000007388	-	57	53.797	Gadus_morhua
ENSGAFG00000009523	-	56	80.818	ENSGACG00000006636	-	99	80.818	Gasterosteus_aculeatus
ENSGAFG00000009523	-	53	58.503	ENSGACG00000013859	zc3h12a	50	58.503	Gasterosteus_aculeatus
ENSGAFG00000009523	-	54	56.478	ENSGACG00000002341	si:dkey-206d17.12	55	56.478	Gasterosteus_aculeatus
ENSGAFG00000009523	-	99	67.130	ENSHBUG00000021584	-	88	84.914	Haplochromis_burtoni
ENSGAFG00000009523	-	54	60.481	ENSHCOG00000008878	-	59	44.025	Hippocampus_comes
ENSGAFG00000009523	-	99	37.843	ENSHCOG00000004255	si:dkey-206d17.12	92	47.257	Hippocampus_comes
ENSGAFG00000009523	-	99	53.142	ENSIPUG00000011663	-	99	53.214	Ictalurus_punctatus
ENSGAFG00000009523	-	58	57.812	ENSJJAG00000004252	Zc3h12a	53	57.407	Jaculus_jaculus
ENSGAFG00000009523	-	99	68.116	ENSKMAG00000014401	-	99	67.942	Kryptolebias_marmoratus
ENSGAFG00000009523	-	97	37.258	ENSLBEG00000017593	si:dkey-206d17.12	94	36.907	Labrus_bergylta
ENSGAFG00000009523	-	55	58.280	ENSLBEG00000012554	-	87	45.625	Labrus_bergylta
ENSGAFG00000009523	-	99	61.179	ENSLBEG00000012121	-	99	61.005	Labrus_bergylta
ENSGAFG00000009523	-	58	60.185	ENSLOCG00000003232	si:dkey-206d17.12	52	60.185	Lepisosteus_oculatus
ENSGAFG00000009523	-	99	50.366	ENSLOCG00000017000	-	99	51.099	Lepisosteus_oculatus
ENSGAFG00000009523	-	55	60.000	ENSLAFG00000018720	ZC3H12A	50	60.000	Loxodonta_africana
ENSGAFG00000009523	-	53	62.671	ENSMFAG00000032647	ZC3H12A	78	60.538	Macaca_fascicularis
ENSGAFG00000009523	-	53	62.671	ENSMNEG00000040453	ZC3H12A	78	60.538	Macaca_nemestrina
ENSGAFG00000009523	-	53	62.671	ENSMLEG00000034570	ZC3H12A	78	60.538	Mandrillus_leucophaeus
ENSGAFG00000009523	-	99	66.025	ENSMAMG00000004463	-	85	85.022	Mastacembelus_armatus
ENSGAFG00000009523	-	54	57.929	ENSMAMG00000021794	-	93	47.500	Mastacembelus_armatus
ENSGAFG00000009523	-	53	60.000	ENSMZEG00005019137	-	89	47.651	Maylandia_zebra
ENSGAFG00000009523	-	99	66.899	ENSMZEG00005015555	-	94	66.841	Maylandia_zebra
ENSGAFG00000009523	-	99	43.029	ENSMGAG00000003371	ZC3H12A	51	62.626	Meleagris_gallopavo
ENSGAFG00000009523	-	53	57.239	ENSMMOG00000013604	si:dkey-206d17.12	52	57.718	Mola_mola
ENSGAFG00000009523	-	99	61.592	ENSMMOG00000014855	-	88	80.952	Mola_mola
ENSGAFG00000009523	-	96	42.143	ENSMMOG00000000727	zc3h12a	84	45.033	Mola_mola
ENSGAFG00000009523	-	54	59.032	ENSMMOG00000005728	-	88	46.358	Mola_mola
ENSGAFG00000009523	-	55	63.366	ENSMODG00000017794	ZC3H12A	87	45.263	Monodelphis_domestica
ENSGAFG00000009523	-	99	59.524	ENSMALG00000018908	-	99	59.068	Monopterus_albus
ENSGAFG00000009523	-	57	58.544	MGP_PahariEiJ_G0028793	Zc3h12a	52	58.544	Mus_pahari
ENSGAFG00000009523	-	53	62.585	MGP_SPRETEiJ_G0027441	Zc3h12a	82	59.483	Mus_spretus
ENSGAFG00000009523	-	54	60.738	ENSMPUG00000014758	ZC3H12A	52	60.738	Mustela_putorius_furo
ENSGAFG00000009523	-	53	61.301	ENSMLUG00000027279	ZC3H12A	92	41.522	Myotis_lucifugus
ENSGAFG00000009523	-	53	58.219	ENSNBRG00000012175	-	89	47.651	Neolamprologus_brichardi
ENSGAFG00000009523	-	54	58.333	ENSNBRG00000014376	si:dkey-206d17.12	51	59.000	Neolamprologus_brichardi
ENSGAFG00000009523	-	99	65.862	ENSNBRG00000010961	-	86	85.153	Neolamprologus_brichardi
ENSGAFG00000009523	-	97	34.266	ENSMEUG00000003389	ZC3H12A	99	33.916	Notamacropus_eugenii
ENSGAFG00000009523	-	53	59.396	ENSONIG00000016235	zc3h12a	53	59.396	Oreochromis_niloticus
ENSGAFG00000009523	-	54	58.224	ENSONIG00000013685	si:dkey-206d17.12	54	58.667	Oreochromis_niloticus
ENSGAFG00000009523	-	99	43.113	ENSOANG00000002060	ZC3H12A	50	60.323	Ornithorhynchus_anatinus
ENSGAFG00000009523	-	53	62.329	ENSOCUG00000010856	ZC3H12A	75	62.329	Oryctolagus_cuniculus
ENSGAFG00000009523	-	99	61.770	ENSORLG00000015280	-	99	61.552	Oryzias_latipes
ENSGAFG00000009523	-	97	40.614	ENSORLG00020016107	-	55	55.340	Oryzias_latipes_hni
ENSGAFG00000009523	-	98	61.470	ENSORLG00020008580	-	87	61.728	Oryzias_latipes_hni
ENSGAFG00000009523	-	56	55.340	ENSORLG00015007634	ZC3H12A	55	55.340	Oryzias_latipes_hsok
ENSGAFG00000009523	-	98	61.470	ENSORLG00015003680	-	87	61.728	Oryzias_latipes_hsok
ENSGAFG00000009523	-	99	62.321	ENSOMEG00000011669	-	99	62.390	Oryzias_melastigma
ENSGAFG00000009523	-	53	59.386	ENSOMEG00000005602	si:dkey-206d17.12	51	59.386	Oryzias_melastigma
ENSGAFG00000009523	-	54	60.000	ENSOARG00000019760	ZC3H12A	69	60.000	Ovis_aries
ENSGAFG00000009523	-	53	61.986	ENSPPAG00000041054	ZC3H12A	78	59.641	Pan_paniscus
ENSGAFG00000009523	-	53	61.565	ENSPTIG00000012943	ZC3H12A	80	59.031	Panthera_tigris_altaica
ENSGAFG00000009523	-	53	61.986	ENSPTRG00000000544	ZC3H12A	78	59.641	Pan_troglodytes
ENSGAFG00000009523	-	53	62.671	ENSPANG00000011821	ZC3H12A	78	60.538	Papio_anubis
ENSGAFG00000009523	-	98	50.000	ENSPKIG00000019720	-	75	69.957	Paramormyrops_kingsleyae
ENSGAFG00000009523	-	54	62.207	ENSPSIG00000009198	ZC3H12A	51	62.207	Pelodiscus_sinensis
ENSGAFG00000009523	-	54	56.146	ENSPMGG00000004114	zc3h12a	53	56.146	Periophthalmus_magnuspinnatus
ENSGAFG00000009523	-	97	42.259	ENSPMGG00000009790	-	68	51.892	Periophthalmus_magnuspinnatus
ENSGAFG00000009523	-	99	93.358	ENSPFOG00000004135	-	99	93.358	Poecilia_formosa
ENSGAFG00000009523	-	73	36.881	ENSPFOG00000002933	si:dkey-206d17.12	99	36.700	Poecilia_formosa
ENSGAFG00000009523	-	73	36.500	ENSPLAG00000016243	si:dkey-206d17.12	91	36.946	Poecilia_latipinna
ENSGAFG00000009523	-	98	92.910	ENSPLAG00000001211	-	99	92.737	Poecilia_latipinna
ENSGAFG00000009523	-	99	39.783	ENSPMEG00000011188	si:dkey-206d17.12	94	39.138	Poecilia_mexicana
ENSGAFG00000009523	-	53	60.751	ENSPREG00000001607	-	73	58.744	Poecilia_reticulata
ENSGAFG00000009523	-	99	90.693	ENSPREG00000020369	-	96	90.693	Poecilia_reticulata
ENSGAFG00000009523	-	54	58.224	ENSPNYG00000003297	si:dkey-206d17.12	73	44.785	Pundamilia_nyererei
ENSGAFG00000009523	-	99	66.899	ENSPNYG00000010663	-	94	66.841	Pundamilia_nyererei
ENSGAFG00000009523	-	76	48.894	ENSPNAG00000015494	zc3h12a	73	48.894	Pygocentrus_nattereri
ENSGAFG00000009523	-	99	48.662	ENSPNAG00000012124	-	99	48.179	Pygocentrus_nattereri
ENSGAFG00000009523	-	53	63.014	ENSRBIG00000042237	ZC3H12A	51	63.014	Rhinopithecus_bieti
ENSGAFG00000009523	-	53	63.014	ENSRROG00000037444	ZC3H12A	78	60.987	Rhinopithecus_roxellana
ENSGAFG00000009523	-	99	61.921	ENSSMAG00000017632	-	99	61.552	Scophthalmus_maximus
ENSGAFG00000009523	-	99	66.551	ENSSDUG00000010581	-	90	85.106	Seriola_dumerili
ENSGAFG00000009523	-	53	58.528	ENSSDUG00000013237	-	89	48.611	Seriola_dumerili
ENSGAFG00000009523	-	99	64.407	ENSSLDG00000022022	-	94	64.007	Seriola_lalandi_dorsalis
ENSGAFG00000009523	-	99	69.627	ENSSPAG00000022537	-	94	69.627	Stegastes_partitus
ENSGAFG00000009523	-	54	57.475	ENSSPAG00000020938	si:dkey-206d17.12	53	57.475	Stegastes_partitus
ENSGAFG00000009523	-	98	40.582	ENSSSCG00000037815	ZC3H12A	94	41.997	Sus_scrofa
ENSGAFG00000009523	-	77	41.741	ENSTRUG00000010565	si:dkey-206d17.12	77	41.741	Takifugu_rubripes
ENSGAFG00000009523	-	54	57.095	ENSTNIG00000001274	si:dkey-206d17.12	56	57.333	Tetraodon_nigroviridis
ENSGAFG00000009523	-	57	58.974	ENSTTRG00000008591	ZC3H12A	51	58.974	Tursiops_truncatus
ENSGAFG00000009523	-	56	60.897	ENSUAMG00000014105	ZC3H12A	51	60.897	Ursus_americanus
ENSGAFG00000009523	-	56	59.807	ENSUMAG00000001122	ZC3H12A	53	59.807	Ursus_maritimus
ENSGAFG00000009523	-	54	61.074	ENSVVUG00000023171	ZC3H12A	51	61.074	Vulpes_vulpes
ENSGAFG00000009523	-	54	60.465	ENSXETG00000011465	zc3h12a	53	60.465	Xenopus_tropicalis
ENSGAFG00000009523	-	99	90.792	ENSXCOG00000001538	-	99	91.529	Xiphophorus_couchianus
ENSGAFG00000009523	-	54	58.389	ENSXCOG00000008984	zc3h12a	87	44.681	Xiphophorus_couchianus
ENSGAFG00000009523	-	53	60.204	ENSXMAG00000014715	-	83	59.111	Xiphophorus_maculatus
ENSGAFG00000009523	-	99	38.616	ENSXMAG00000025043	si:dkey-206d17.12	94	38.616	Xiphophorus_maculatus
ENSGAFG00000009523	-	99	91.009	ENSXMAG00000005023	-	99	91.009	Xiphophorus_maculatus