EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000009721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4761 bases
Position: chrNHOQ01001433.1:199999-204759
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014368	MMR_HSR1	PF01926.23	4.4e-05	1	1
ENSGAFP00000014372	MMR_HSR1	PF01926.23	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014519	-	1601	-	ENSGAFP00000014372	511 (aa)	-	-
ENSGAFT00000014515	-	1209	-	ENSGAFP00000014368	402 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009721	-	60	30.208	ENSACIG00000005573	-	85	30.208	Amphilophus_citrinellus
ENSGAFG00000009721	-	99	47.860	ENSAOCG00000011260	-	70	47.860	Amphiprion_ocellaris
ENSGAFG00000009721	-	67	43.542	ENSAPEG00000008618	-	55	43.542	Amphiprion_percula
ENSGAFG00000009721	-	99	48.743	ENSAPEG00000008662	-	96	48.743	Amphiprion_percula
ENSGAFG00000009721	-	57	31.892	ENSATEG00000011594	-	73	37.795	Anabas_testudineus
ENSGAFG00000009721	-	54	35.928	ENSATEG00000011635	-	73	32.990	Anabas_testudineus
ENSGAFG00000009721	-	99	53.346	ENSACLG00000001341	-	96	51.841	Astatotilapia_calliptera
ENSGAFG00000009721	-	61	49.593	ENSACLG00000000859	-	90	49.593	Astatotilapia_calliptera
ENSGAFG00000009721	-	54	34.921	ENSAMXG00000038580	-	78	34.921	Astyanax_mexicanus
ENSGAFG00000009721	-	65	30.846	ENSAMXG00000036317	-	94	30.846	Astyanax_mexicanus
ENSGAFG00000009721	-	50	31.905	ENSCVAG00000007737	-	89	31.905	Cyprinodon_variegatus
ENSGAFG00000009721	-	86	63.006	ENSCVAG00000020790	-	98	63.006	Cyprinodon_variegatus
ENSGAFG00000009721	-	51	33.333	ENSDARG00000076573	si:dkey-88j15.3	69	33.511	Danio_rerio
ENSGAFG00000009721	-	52	30.263	ENSGACG00000018970	-	89	30.263	Gasterosteus_aculeatus
ENSGAFG00000009721	-	99	53.346	ENSHBUG00000019282	-	92	53.346	Haplochromis_burtoni
ENSGAFG00000009721	-	54	30.531	ENSLBEG00000010225	-	79	30.531	Labrus_bergylta
ENSGAFG00000009721	-	54	33.898	ENSLOCG00000013437	-	89	33.898	Lepisosteus_oculatus
ENSGAFG00000009721	-	51	33.178	ENSLOCG00000011761	-	67	33.484	Lepisosteus_oculatus
ENSGAFG00000009721	-	50	31.858	ENSMAMG00000018096	-	79	31.858	Mastacembelus_armatus
ENSGAFG00000009721	-	99	53.150	ENSMZEG00005027814	-	92	53.150	Maylandia_zebra
ENSGAFG00000009721	-	50	34.450	ENSMZEG00005001615	-	88	34.450	Maylandia_zebra
ENSGAFG00000009721	-	61	48.980	ENSNBRG00000017779	-	82	48.980	Neolamprologus_brichardi
ENSGAFG00000009721	-	50	43.204	ENSONIG00000007408	-	64	43.204	Oreochromis_niloticus
ENSGAFG00000009721	-	55	30.802	ENSORLG00000026065	-	83	33.133	Oryzias_latipes
ENSGAFG00000009721	-	55	36.123	ENSOMEG00000018499	-	79	36.123	Oryzias_melastigma
ENSGAFG00000009721	-	51	31.507	ENSPFOG00000000432	-	63	38.095	Poecilia_formosa
ENSGAFG00000009721	-	50	31.383	ENSPFOG00000018914	-	92	31.383	Poecilia_formosa
ENSGAFG00000009721	-	69	34.409	ENSPREG00000003230	-	93	34.409	Poecilia_reticulata
ENSGAFG00000009721	-	50	31.839	ENSPREG00000007348	-	74	32.143	Poecilia_reticulata
ENSGAFG00000009721	-	50	30.851	ENSPNAG00000025977	-	51	30.851	Pygocentrus_nattereri
ENSGAFG00000009721	-	53	30.178	ENSSPAG00000015913	-	74	30.769	Stegastes_partitus
ENSGAFG00000009721	-	99	61.818	ENSSPAG00000011485	-	97	61.818	Stegastes_partitus
ENSGAFG00000009721	-	51	34.737	ENSXCOG00000012536	-	70	34.737	Xiphophorus_couchianus