EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000009886 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4068 bases
Position: chrNHOQ01000074.1:1942562-1946629
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014609	PseudoU_synth_2	PF00849.22	2.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014758	-	1888	-	ENSGAFP00000014609	304 (aa)	-	UPI000DD23145

Gene Model

Click here to download ENSGAFG00000009886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009886	rpusd1	98	56.066	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSGAFG00000009886	rpusd1	100	79.739	ENSAPOG00000022221	rpusd1	99	80.583	Acanthochromis_polyacanthus
ENSGAFG00000009886	rpusd1	98	59.333	ENSAMEG00000007461	RPUSD1	98	59.333	Ailuropoda_melanoleuca
ENSGAFG00000009886	rpusd1	100	78.135	ENSACIG00000015863	rpusd1	100	78.387	Amphilophus_citrinellus
ENSGAFG00000009886	rpusd1	100	81.230	ENSAOCG00000021975	rpusd1	97	81.230	Amphiprion_ocellaris
ENSGAFG00000009886	rpusd1	100	81.553	ENSAPEG00000001316	rpusd1	97	81.553	Amphiprion_percula
ENSGAFG00000009886	rpusd1	100	78.317	ENSATEG00000002984	rpusd1	99	78.317	Anabas_testudineus
ENSGAFG00000009886	rpusd1	77	58.333	ENSAPLG00000012316	RPUSD1	98	58.333	Anas_platyrhynchos
ENSGAFG00000009886	rpusd1	98	62.876	ENSACAG00000008953	RPUSD1	99	62.876	Anolis_carolinensis
ENSGAFG00000009886	rpusd1	98	56.066	ENSANAG00000024709	RPUSD1	98	56.066	Aotus_nancymaae
ENSGAFG00000009886	rpusd1	100	78.135	ENSACLG00000013692	rpusd1	100	78.135	Astatotilapia_calliptera
ENSGAFG00000009886	rpusd1	99	69.767	ENSAMXG00000019802	rpusd1	99	69.767	Astyanax_mexicanus
ENSGAFG00000009886	rpusd1	98	59.468	ENSBTAG00000000179	RPUSD1	98	59.468	Bos_taurus
ENSGAFG00000009886	rpusd1	98	54.232	ENSCJAG00000012253	RPUSD1	98	56.169	Callithrix_jacchus
ENSGAFG00000009886	rpusd1	98	57.333	ENSCAFG00000019614	RPUSD1	98	58.333	Canis_familiaris
ENSGAFG00000009886	rpusd1	98	57.333	ENSCAFG00020008891	RPUSD1	98	58.333	Canis_lupus_dingo
ENSGAFG00000009886	rpusd1	98	60.133	ENSCHIG00000012872	RPUSD1	98	59.344	Capra_hircus
ENSGAFG00000009886	rpusd1	98	56.478	ENSTSYG00000036934	RPUSD1	98	56.478	Carlito_syrichta
ENSGAFG00000009886	rpusd1	98	57.000	ENSCAPG00000014219	RPUSD1	98	57.000	Cavia_aperea
ENSGAFG00000009886	rpusd1	98	57.000	ENSCPOG00000034604	RPUSD1	98	57.000	Cavia_porcellus
ENSGAFG00000009886	rpusd1	98	56.393	ENSCCAG00000034385	RPUSD1	98	56.863	Cebus_capucinus
ENSGAFG00000009886	rpusd1	98	54.545	ENSCATG00000042983	RPUSD1	98	56.863	Cercocebus_atys
ENSGAFG00000009886	rpusd1	98	56.000	ENSCLAG00000013966	RPUSD1	98	56.106	Chinchilla_lanigera
ENSGAFG00000009886	rpusd1	98	56.393	ENSCSAG00000012121	RPUSD1	98	56.393	Chlorocebus_sabaeus
ENSGAFG00000009886	rpusd1	98	61.921	ENSCPBG00000021101	RPUSD1	99	61.921	Chrysemys_picta_bellii
ENSGAFG00000009886	rpusd1	83	63.241	ENSCANG00000028576	RPUSD1	90	63.241	Colobus_angolensis_palliatus
ENSGAFG00000009886	rpusd1	98	58.472	ENSCGRG00001014253	Rpusd1	98	58.472	Cricetulus_griseus_chok1gshd
ENSGAFG00000009886	rpusd1	98	58.472	ENSCGRG00000017995	Rpusd1	98	58.472	Cricetulus_griseus_crigri
ENSGAFG00000009886	rpusd1	99	75.748	ENSCSEG00000018512	rpusd1	99	75.748	Cynoglossus_semilaevis
ENSGAFG00000009886	rpusd1	100	88.816	ENSCVAG00000022746	rpusd1	100	88.816	Cyprinodon_variegatus
ENSGAFG00000009886	rpusd1	98	70.234	ENSDARG00000060192	rpusd1	99	70.234	Danio_rerio
ENSGAFG00000009886	rpusd1	98	55.960	ENSDNOG00000003721	RPUSD1	98	55.960	Dasypus_novemcinctus
ENSGAFG00000009886	rpusd1	98	57.333	ENSDORG00000026656	Rpusd1	98	57.667	Dipodomys_ordii
ENSGAFG00000009886	rpusd1	96	46.753	ENSEBUG00000008767	rpusd1	92	46.753	Eptatretus_burgeri
ENSGAFG00000009886	rpusd1	98	56.311	ENSEASG00005018421	RPUSD1	74	56.634	Equus_asinus_asinus
ENSGAFG00000009886	rpusd1	100	69.010	ENSELUG00000014307	rpusd1	90	71.104	Esox_lucius
ENSGAFG00000009886	rpusd1	98	57.667	ENSFCAG00000010359	RPUSD1	98	57.667	Felis_catus
ENSGAFG00000009886	rpusd1	98	64.548	ENSFALG00000003211	RPUSD1	99	64.548	Ficedula_albicollis
ENSGAFG00000009886	rpusd1	98	57.333	ENSFDAG00000013398	RPUSD1	98	57.333	Fukomys_damarensis
ENSGAFG00000009886	rpusd1	100	86.971	ENSFHEG00000004736	rpusd1	100	89.577	Fundulus_heteroclitus
ENSGAFG00000009886	rpusd1	99	70.358	ENSGMOG00000010756	rpusd1	99	70.684	Gadus_morhua
ENSGAFG00000009886	rpusd1	98	64.026	ENSGALG00000005315	RPUSD1	99	64.026	Gallus_gallus
ENSGAFG00000009886	rpusd1	100	77.346	ENSGACG00000014276	rpusd1	100	77.346	Gasterosteus_aculeatus
ENSGAFG00000009886	rpusd1	98	61.589	ENSGAGG00000004181	RPUSD1	99	61.589	Gopherus_agassizii
ENSGAFG00000009886	rpusd1	98	56.536	ENSGGOG00000013997	RPUSD1	98	57.003	Gorilla_gorilla
ENSGAFG00000009886	rpusd1	100	78.457	ENSHBUG00000023728	rpusd1	100	78.457	Haplochromis_burtoni
ENSGAFG00000009886	rpusd1	98	56.667	ENSHGLG00000002595	RPUSD1	98	56.106	Heterocephalus_glaber_female
ENSGAFG00000009886	rpusd1	98	56.667	ENSHGLG00100014303	RPUSD1	98	56.106	Heterocephalus_glaber_male
ENSGAFG00000009886	rpusd1	99	73.856	ENSHCOG00000002390	rpusd1	99	73.856	Hippocampus_comes
ENSGAFG00000009886	rpusd1	98	66.779	ENSIPUG00000001570	rpusd1	98	66.779	Ictalurus_punctatus
ENSGAFG00000009886	rpusd1	98	57.000	ENSSTOG00000004276	RPUSD1	98	57.000	Ictidomys_tridecemlineatus
ENSGAFG00000009886	rpusd1	98	57.807	ENSJJAG00000015696	Rpusd1	98	58.140	Jaculus_jaculus
ENSGAFG00000009886	rpusd1	99	85.149	ENSKMAG00000017287	rpusd1	99	85.149	Kryptolebias_marmoratus
ENSGAFG00000009886	rpusd1	100	77.346	ENSLBEG00000013354	RPUSD1	99	77.346	Labrus_bergylta
ENSGAFG00000009886	rpusd1	100	77.346	ENSLBEG00000022502	rpusd1	99	77.346	Labrus_bergylta
ENSGAFG00000009886	rpusd1	98	62.829	ENSLACG00000008869	RPUSD1	99	62.829	Latimeria_chalumnae
ENSGAFG00000009886	rpusd1	70	81.776	ENSLOCG00000005682	rpusd1	99	81.776	Lepisosteus_oculatus
ENSGAFG00000009886	rpusd1	98	56.333	ENSLAFG00000002115	RPUSD1	98	56.333	Loxodonta_africana
ENSGAFG00000009886	rpusd1	98	56.393	ENSMFAG00000003961	RPUSD1	98	55.949	Macaca_fascicularis
ENSGAFG00000009886	rpusd1	98	56.393	ENSMMUG00000000842	RPUSD1	98	55.949	Macaca_mulatta
ENSGAFG00000009886	rpusd1	98	56.393	ENSMNEG00000042712	RPUSD1	98	55.949	Macaca_nemestrina
ENSGAFG00000009886	rpusd1	98	56.393	ENSMLEG00000030591	RPUSD1	98	55.949	Mandrillus_leucophaeus
ENSGAFG00000009886	rpusd1	100	80.968	ENSMAMG00000004735	rpusd1	99	80.968	Mastacembelus_armatus
ENSGAFG00000009886	rpusd1	100	78.135	ENSMZEG00005003214	rpusd1	100	78.135	Maylandia_zebra
ENSGAFG00000009886	rpusd1	96	64.310	ENSMGAG00000005447	RPUSD1	98	64.310	Meleagris_gallopavo
ENSGAFG00000009886	rpusd1	83	56.917	ENSMAUG00000019998	Rpusd1	96	56.917	Mesocricetus_auratus
ENSGAFG00000009886	rpusd1	98	56.333	ENSMICG00000017561	RPUSD1	98	56.333	Microcebus_murinus
ENSGAFG00000009886	rpusd1	98	59.000	ENSMOCG00000014082	Rpusd1	98	59.000	Microtus_ochrogaster
ENSGAFG00000009886	rpusd1	99	74.510	ENSMMOG00000012569	rpusd1	99	74.593	Mola_mola
ENSGAFG00000009886	rpusd1	99	62.376	ENSMODG00000016882	RPUSD1	99	62.376	Monodelphis_domestica
ENSGAFG00000009886	rpusd1	100	78.526	ENSMALG00000017818	rpusd1	99	78.778	Monopterus_albus
ENSGAFG00000009886	rpusd1	98	59.000	MGP_CAROLIEiJ_G0021244	Rpusd1	98	59.000	Mus_caroli
ENSGAFG00000009886	rpusd1	98	59.000	ENSMUSG00000041199	Rpusd1	98	59.000	Mus_musculus
ENSGAFG00000009886	rpusd1	98	58.033	MGP_PahariEiJ_G0023562	Rpusd1	98	58.140	Mus_pahari
ENSGAFG00000009886	rpusd1	98	59.000	MGP_SPRETEiJ_G0022155	Rpusd1	98	59.000	Mus_spretus
ENSGAFG00000009886	rpusd1	96	56.949	ENSMPUG00000015897	RPUSD1	96	57.912	Mustela_putorius_furo
ENSGAFG00000009886	rpusd1	98	56.908	ENSMLUG00000001089	RPUSD1	98	57.377	Myotis_lucifugus
ENSGAFG00000009886	rpusd1	98	57.667	ENSNGAG00000003595	Rpusd1	98	57.667	Nannospalax_galili
ENSGAFG00000009886	rpusd1	100	79.276	ENSNBRG00000006457	rpusd1	100	79.276	Neolamprologus_brichardi
ENSGAFG00000009886	rpusd1	53	47.647	ENSNLEG00000008424	-	97	47.953	Nomascus_leucogenys
ENSGAFG00000009886	rpusd1	98	61.538	ENSMEUG00000016049	RPUSD1	98	61.538	Notamacropus_eugenii
ENSGAFG00000009886	rpusd1	98	51.000	ENSOPRG00000008340	RPUSD1	98	51.000	Ochotona_princeps
ENSGAFG00000009886	rpusd1	98	55.667	ENSODEG00000016945	RPUSD1	98	55.667	Octodon_degus
ENSGAFG00000009886	rpusd1	99	77.922	ENSONIG00000015672	rpusd1	100	77.922	Oreochromis_niloticus
ENSGAFG00000009886	rpusd1	100	77.049	ENSORLG00000013009	rpusd1	99	77.049	Oryzias_latipes
ENSGAFG00000009886	rpusd1	100	77.377	ENSORLG00020010382	rpusd1	99	77.377	Oryzias_latipes_hni
ENSGAFG00000009886	rpusd1	100	76.393	ENSORLG00015021354	rpusd1	99	76.393	Oryzias_latipes_hsok
ENSGAFG00000009886	rpusd1	100	77.632	ENSOMEG00000021426	rpusd1	99	77.303	Oryzias_melastigma
ENSGAFG00000009886	rpusd1	98	56.066	ENSOGAG00000003795	RPUSD1	98	56.066	Otolemur_garnettii
ENSGAFG00000009886	rpusd1	98	59.801	ENSOARG00000014254	RPUSD1	98	59.801	Ovis_aries
ENSGAFG00000009886	rpusd1	98	56.066	ENSPPAG00000034797	RPUSD1	98	56.536	Pan_paniscus
ENSGAFG00000009886	rpusd1	98	58.000	ENSPPRG00000012389	RPUSD1	98	58.000	Panthera_pardus
ENSGAFG00000009886	rpusd1	99	57.947	ENSPTIG00000008545	RPUSD1	77	73.267	Panthera_tigris_altaica
ENSGAFG00000009886	rpusd1	98	56.066	ENSPTRG00000007565	RPUSD1	98	56.536	Pan_troglodytes
ENSGAFG00000009886	rpusd1	98	56.393	ENSPANG00000024401	RPUSD1	98	55.949	Papio_anubis
ENSGAFG00000009886	rpusd1	100	69.408	ENSPKIG00000018890	rpusd1	91	69.408	Paramormyrops_kingsleyae
ENSGAFG00000009886	rpusd1	98	63.576	ENSPSIG00000013945	RPUSD1	99	63.576	Pelodiscus_sinensis
ENSGAFG00000009886	rpusd1	100	73.355	ENSPMGG00000014950	rpusd1	99	74.026	Periophthalmus_magnuspinnatus
ENSGAFG00000009886	rpusd1	98	58.000	ENSPEMG00000000497	Rpusd1	98	58.000	Peromyscus_maniculatus_bairdii
ENSGAFG00000009886	rpusd1	99	54.605	ENSPMAG00000001563	rpusd1	99	53.618	Petromyzon_marinus
ENSGAFG00000009886	rpusd1	98	63.667	ENSPCIG00000021216	-	92	63.667	Phascolarctos_cinereus
ENSGAFG00000009886	rpusd1	100	94.737	ENSPFOG00000007946	rpusd1	100	94.737	Poecilia_formosa
ENSGAFG00000009886	rpusd1	100	94.737	ENSPLAG00000011925	rpusd1	100	94.737	Poecilia_latipinna
ENSGAFG00000009886	rpusd1	100	94.737	ENSPMEG00000002910	rpusd1	100	94.737	Poecilia_mexicana
ENSGAFG00000009886	rpusd1	100	96.053	ENSPREG00000019851	rpusd1	100	96.053	Poecilia_reticulata
ENSGAFG00000009886	rpusd1	98	43.667	ENSPCAG00000002258	RPUSD1	98	43.667	Procavia_capensis
ENSGAFG00000009886	rpusd1	98	55.082	ENSPCOG00000022582	RPUSD1	98	54.870	Propithecus_coquereli
ENSGAFG00000009886	rpusd1	98	52.564	ENSPVAG00000013104	RPUSD1	98	53.268	Pteropus_vampyrus
ENSGAFG00000009886	rpusd1	100	78.457	ENSPNYG00000024076	rpusd1	100	78.457	Pundamilia_nyererei
ENSGAFG00000009886	rpusd1	99	68.106	ENSPNAG00000013806	rpusd1	99	68.106	Pygocentrus_nattereri
ENSGAFG00000009886	rpusd1	98	59.000	ENSRNOG00000023639	Rpusd1	98	59.000	Rattus_norvegicus
ENSGAFG00000009886	rpusd1	98	56.721	ENSRBIG00000030238	RPUSD1	98	57.190	Rhinopithecus_bieti
ENSGAFG00000009886	rpusd1	98	56.721	ENSRROG00000036663	RPUSD1	98	57.190	Rhinopithecus_roxellana
ENSGAFG00000009886	rpusd1	98	57.000	ENSSBOG00000033063	RPUSD1	98	57.667	Saimiri_boliviensis_boliviensis
ENSGAFG00000009886	rpusd1	98	62.542	ENSSHAG00000013500	RPUSD1	98	62.542	Sarcophilus_harrisii
ENSGAFG00000009886	rpusd1	98	71.906	ENSSFOG00015014394	rpusd1	99	71.906	Scleropages_formosus
ENSGAFG00000009886	rpusd1	100	81.553	ENSSMAG00000008045	rpusd1	93	81.553	Scophthalmus_maximus
ENSGAFG00000009886	rpusd1	100	81.553	ENSSDUG00000001829	rpusd1	97	81.553	Seriola_dumerili
ENSGAFG00000009886	rpusd1	100	81.553	ENSSLDG00000020853	rpusd1	97	81.553	Seriola_lalandi_dorsalis
ENSGAFG00000009886	rpusd1	54	71.687	ENSSARG00000011187	-	99	71.687	Sorex_araneus
ENSGAFG00000009886	rpusd1	62	61.905	ENSSPUG00000005119	-	98	61.905	Sphenodon_punctatus
ENSGAFG00000009886	rpusd1	100	83.819	ENSSPAG00000012708	rpusd1	99	83.819	Stegastes_partitus
ENSGAFG00000009886	rpusd1	98	57.049	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSGAFG00000009886	rpusd1	82	70.683	ENSTGUG00000015375	RPUSD1	98	70.683	Taeniopygia_guttata
ENSGAFG00000009886	rpusd1	100	74.757	ENSTRUG00000003041	rpusd1	99	76.375	Takifugu_rubripes
ENSGAFG00000009886	rpusd1	99	70.764	ENSTNIG00000002660	rpusd1	99	70.764	Tetraodon_nigroviridis
ENSGAFG00000009886	rpusd1	98	58.361	ENSTTRG00000010167	RPUSD1	98	58.497	Tursiops_truncatus
ENSGAFG00000009886	rpusd1	98	58.278	ENSUAMG00000012736	RPUSD1	98	58.940	Ursus_americanus
ENSGAFG00000009886	rpusd1	98	58.333	ENSUMAG00000021174	RPUSD1	98	58.940	Ursus_maritimus
ENSGAFG00000009886	rpusd1	98	59.000	ENSVVUG00000012357	RPUSD1	98	59.000	Vulpes_vulpes
ENSGAFG00000009886	rpusd1	98	63.545	ENSXETG00000007184	rpusd1	98	63.545	Xenopus_tropicalis
ENSGAFG00000009886	rpusd1	100	95.724	ENSXCOG00000017930	rpusd1	100	95.724	Xiphophorus_couchianus
ENSGAFG00000009886	rpusd1	100	96.053	ENSXMAG00000024084	rpusd1	100	96.053	Xiphophorus_maculatus