EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009953 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: zgc:162730
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3558 bases
Position: chrNHOQ01001971.1:7962229-7965786
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014728	zf-CCCH	PF00642.24	4.6e-19	1	2
ENSGAFP00000014728	zf-CCCH	PF00642.24	4.6e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014876	-	3385	-	ENSGAFP00000014728	416 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009953	zgc:162730	84	40.164	ENSGAFG00000015700	sb:cb81	76	40.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009953	zgc:162730	100	78.873	ENSAPOG00000014920	zgc:162730	100	78.638	Acanthochromis_polyacanthus
ENSGAFG00000009953	zgc:162730	84	38.630	ENSAPOG00000011209	sb:cb81	83	39.326	Acanthochromis_polyacanthus
ENSGAFG00000009953	zgc:162730	58	68.852	ENSACIG00000017366	zgc:162730	97	68.852	Amphilophus_citrinellus
ENSGAFG00000009953	zgc:162730	61	40.357	ENSACIG00000009027	sb:cb81	77	38.298	Amphilophus_citrinellus
ENSGAFG00000009953	zgc:162730	100	76.995	ENSAOCG00000002001	zgc:162730	100	78.169	Amphiprion_ocellaris
ENSGAFG00000009953	zgc:162730	85	35.294	ENSAOCG00000024158	sb:cb81	78	38.746	Amphiprion_ocellaris
ENSGAFG00000009953	zgc:162730	94	79.449	ENSAPEG00000015490	zgc:162730	98	78.947	Amphiprion_percula
ENSGAFG00000009953	zgc:162730	85	34.737	ENSAPEG00000022405	sb:cb81	78	38.701	Amphiprion_percula
ENSGAFG00000009953	zgc:162730	99	34.361	ENSATEG00000003462	sb:cb81	78	36.364	Anabas_testudineus
ENSGAFG00000009953	zgc:162730	100	70.093	ENSATEG00000008790	zgc:162730	100	71.495	Anabas_testudineus
ENSGAFG00000009953	zgc:162730	90	37.346	ENSACLG00000013759	sb:cb81	77	38.398	Astatotilapia_calliptera
ENSGAFG00000009953	zgc:162730	100	72.104	ENSACLG00000022112	zgc:162730	100	71.868	Astatotilapia_calliptera
ENSGAFG00000009953	zgc:162730	100	45.694	ENSAMXG00000035945	zgc:162730	99	45.215	Astyanax_mexicanus
ENSGAFG00000009953	zgc:162730	70	42.020	ENSAMXG00000034874	sb:cb81	81	39.130	Astyanax_mexicanus
ENSGAFG00000009953	zgc:162730	55	39.271	ENSCSEG00000018290	zgc:114130	76	34.254	Cynoglossus_semilaevis
ENSGAFG00000009953	zgc:162730	88	36.296	ENSCSEG00000014426	sb:cb81	66	37.326	Cynoglossus_semilaevis
ENSGAFG00000009953	zgc:162730	98	68.735	ENSCSEG00000018283	zgc:162730	100	64.286	Cynoglossus_semilaevis
ENSGAFG00000009953	zgc:162730	88	36.340	ENSCVAG00000009207	sb:cb81	79	38.764	Cyprinodon_variegatus
ENSGAFG00000009953	zgc:162730	100	85.885	ENSCVAG00000018571	zgc:162730	100	85.407	Cyprinodon_variegatus
ENSGAFG00000009953	zgc:162730	84	38.933	ENSDARG00000040503	sb:cb81	78	40.341	Danio_rerio
ENSGAFG00000009953	zgc:162730	70	37.821	ENSDARG00000040725	zgc:114130	67	35.294	Danio_rerio
ENSGAFG00000009953	zgc:162730	100	44.313	ENSDARG00000103720	zgc:162730	85	49.853	Danio_rerio
ENSGAFG00000009953	zgc:162730	100	53.901	ENSELUG00000013158	zgc:162730	100	53.901	Esox_lucius
ENSGAFG00000009953	zgc:162730	99	33.483	ENSELUG00000013045	sb:cb81	77	36.415	Esox_lucius
ENSGAFG00000009953	zgc:162730	100	86.364	ENSFHEG00000013710	zgc:162730	100	86.364	Fundulus_heteroclitus
ENSGAFG00000009953	zgc:162730	99	36.180	ENSFHEG00000022187	sb:cb81	79	39.674	Fundulus_heteroclitus
ENSGAFG00000009953	zgc:162730	79	64.688	ENSGMOG00000017242	zgc:162730	99	65.579	Gadus_morhua
ENSGAFG00000009953	zgc:162730	83	38.667	ENSGACG00000013400	sb:cb81	95	38.398	Gasterosteus_aculeatus
ENSGAFG00000009953	zgc:162730	79	70.710	ENSGACG00000008351	zgc:162730	99	71.598	Gasterosteus_aculeatus
ENSGAFG00000009953	zgc:162730	65	41.869	ENSHBUG00000002383	sb:cb81	78	38.082	Haplochromis_burtoni
ENSGAFG00000009953	zgc:162730	100	71.868	ENSHBUG00000015057	zgc:162730	100	71.631	Haplochromis_burtoni
ENSGAFG00000009953	zgc:162730	100	69.142	ENSHCOG00000015801	zgc:162730	100	69.838	Hippocampus_comes
ENSGAFG00000009953	zgc:162730	57	39.526	ENSHCOG00000015800	zgc:114130	53	41.423	Hippocampus_comes
ENSGAFG00000009953	zgc:162730	100	44.286	ENSIPUG00000018248	zgc:162730	100	43.810	Ictalurus_punctatus
ENSGAFG00000009953	zgc:162730	100	77.069	ENSKMAG00000019277	zgc:162730	100	76.832	Kryptolebias_marmoratus
ENSGAFG00000009953	zgc:162730	84	38.845	ENSKMAG00000009884	sb:cb81	77	38.251	Kryptolebias_marmoratus
ENSGAFG00000009953	zgc:162730	60	37.956	ENSLBEG00000018387	zgc:114130	65	40.136	Labrus_bergylta
ENSGAFG00000009953	zgc:162730	100	69.374	ENSLBEG00000018380	zgc:162730	100	70.070	Labrus_bergylta
ENSGAFG00000009953	zgc:162730	100	37.844	ENSLACG00000015980	-	84	39.714	Latimeria_chalumnae
ENSGAFG00000009953	zgc:162730	99	38.118	ENSLACG00000015732	sb:cb81	97	36.407	Latimeria_chalumnae
ENSGAFG00000009953	zgc:162730	99	37.327	ENSLOCG00000014587	sb:cb81	97	39.052	Lepisosteus_oculatus
ENSGAFG00000009953	zgc:162730	100	48.148	ENSLOCG00000014597	zgc:162730	100	48.478	Lepisosteus_oculatus
ENSGAFG00000009953	zgc:162730	72	35.714	ENSMAMG00000007511	zgc:114130	93	33.333	Mastacembelus_armatus
ENSGAFG00000009953	zgc:162730	100	72.261	ENSMAMG00000007516	zgc:162730	99	73.660	Mastacembelus_armatus
ENSGAFG00000009953	zgc:162730	65	40.878	ENSMAMG00000020144	sb:cb81	70	38.522	Mastacembelus_armatus
ENSGAFG00000009953	zgc:162730	90	37.500	ENSMZEG00005024684	sb:cb81	77	38.843	Maylandia_zebra
ENSGAFG00000009953	zgc:162730	90	37.838	ENSMZEG00005016001	-	77	38.950	Maylandia_zebra
ENSGAFG00000009953	zgc:162730	100	66.826	ENSMZEG00005014415	zgc:162730	97	70.082	Maylandia_zebra
ENSGAFG00000009953	zgc:162730	65	41.053	ENSMMOG00000010073	sb:cb81	66	43.310	Mola_mola
ENSGAFG00000009953	zgc:162730	59	71.200	ENSMMOG00000011506	zgc:162730	99	72.400	Mola_mola
ENSGAFG00000009953	zgc:162730	100	69.535	ENSMALG00000002348	zgc:162730	100	70.233	Monopterus_albus
ENSGAFG00000009953	zgc:162730	100	72.104	ENSNBRG00000013701	zgc:162730	100	71.868	Neolamprologus_brichardi
ENSGAFG00000009953	zgc:162730	84	37.831	ENSNBRG00000006231	sb:cb81	76	39.773	Neolamprologus_brichardi
ENSGAFG00000009953	zgc:162730	82	66.185	ENSONIG00000005003	zgc:162730	98	69.006	Oreochromis_niloticus
ENSGAFG00000009953	zgc:162730	99	60.757	ENSORLG00000027149	zgc:162730	100	62.648	Oryzias_latipes
ENSGAFG00000009953	zgc:162730	88	38.120	ENSORLG00000024026	sb:cb81	67	38.889	Oryzias_latipes
ENSGAFG00000009953	zgc:162730	99	61.229	ENSORLG00020020289	zgc:162730	100	63.121	Oryzias_latipes_hni
ENSGAFG00000009953	zgc:162730	58	41.767	ENSORLG00020021084	sb:cb81	78	39.718	Oryzias_latipes_hni
ENSGAFG00000009953	zgc:162730	99	61.792	ENSORLG00015001519	zgc:162730	100	63.443	Oryzias_latipes_hsok
ENSGAFG00000009953	zgc:162730	88	37.566	ENSORLG00015010105	sb:cb81	78	40.113	Oryzias_latipes_hsok
ENSGAFG00000009953	zgc:162730	99	63.318	ENSOMEG00000017752	zgc:162730	100	64.692	Oryzias_melastigma
ENSGAFG00000009953	zgc:162730	88	38.583	ENSOMEG00000020565	sb:cb81	77	39.943	Oryzias_melastigma
ENSGAFG00000009953	zgc:162730	100	94.712	ENSPFOG00000003665	zgc:162730	100	94.712	Poecilia_formosa
ENSGAFG00000009953	zgc:162730	84	38.172	ENSPFOG00000013806	sb:cb81	76	38.655	Poecilia_formosa
ENSGAFG00000009953	zgc:162730	84	37.903	ENSPLAG00000020158	sb:cb81	83	38.375	Poecilia_latipinna
ENSGAFG00000009953	zgc:162730	100	94.471	ENSPLAG00000000946	zgc:162730	100	94.471	Poecilia_latipinna
ENSGAFG00000009953	zgc:162730	100	95.433	ENSPMEG00000000341	zgc:162730	100	95.433	Poecilia_mexicana
ENSGAFG00000009953	zgc:162730	84	38.172	ENSPMEG00000022425	sb:cb81	76	38.655	Poecilia_mexicana
ENSGAFG00000009953	zgc:162730	100	95.913	ENSPREG00000021263	zgc:162730	100	95.913	Poecilia_reticulata
ENSGAFG00000009953	zgc:162730	51	43.925	ENSPREG00000017495	sb:cb81	76	40.173	Poecilia_reticulata
ENSGAFG00000009953	zgc:162730	65	41.869	ENSPNYG00000007502	sb:cb81	76	39.660	Pundamilia_nyererei
ENSGAFG00000009953	zgc:162730	100	72.104	ENSPNYG00000015553	zgc:162730	100	71.868	Pundamilia_nyererei
ENSGAFG00000009953	zgc:162730	69	42.763	ENSPNAG00000030063	sb:cb81	78	41.360	Pygocentrus_nattereri
ENSGAFG00000009953	zgc:162730	100	45.238	ENSPNAG00000023018	zgc:162730	100	45.714	Pygocentrus_nattereri
ENSGAFG00000009953	zgc:162730	50	37.559	ENSPNAG00000023029	zgc:114130	93	31.340	Pygocentrus_nattereri
ENSGAFG00000009953	zgc:162730	54	39.574	ENSSFOG00015003179	sb:cb81	75	36.888	Scleropages_formosus
ENSGAFG00000009953	zgc:162730	100	71.562	ENSSMAG00000018612	zgc:162730	100	72.261	Scophthalmus_maximus
ENSGAFG00000009953	zgc:162730	60	36.704	ENSSMAG00000018621	zgc:114130	68	34.056	Scophthalmus_maximus
ENSGAFG00000009953	zgc:162730	100	73.380	ENSSDUG00000002247	zgc:162730	100	74.074	Seriola_dumerili
ENSGAFG00000009953	zgc:162730	72	34.783	ENSSDUG00000002237	zgc:114130	60	38.550	Seriola_dumerili
ENSGAFG00000009953	zgc:162730	84	39.378	ENSSDUG00000004426	sb:cb81	76	39.718	Seriola_dumerili
ENSGAFG00000009953	zgc:162730	84	39.378	ENSSLDG00000018035	sb:cb81	77	39.718	Seriola_lalandi_dorsalis
ENSGAFG00000009953	zgc:162730	100	72.917	ENSSLDG00000008502	zgc:162730	100	73.611	Seriola_lalandi_dorsalis
ENSGAFG00000009953	zgc:162730	72	35.294	ENSSLDG00000008496	zgc:114130	60	37.931	Seriola_lalandi_dorsalis
ENSGAFG00000009953	zgc:162730	100	77.465	ENSSPAG00000006851	zgc:162730	100	78.169	Stegastes_partitus
ENSGAFG00000009953	zgc:162730	65	40.780	ENSSPAG00000013546	sb:cb81	80	40.669	Stegastes_partitus
ENSGAFG00000009953	zgc:162730	85	35.200	ENSTRUG00000020720	sb:cb81	81	35.979	Takifugu_rubripes
ENSGAFG00000009953	zgc:162730	100	68.396	ENSTRUG00000021229	zgc:162730	100	69.104	Takifugu_rubripes
ENSGAFG00000009953	zgc:162730	94	63.158	ENSTNIG00000000183	zgc:162730	98	66.416	Tetraodon_nigroviridis
ENSGAFG00000009953	zgc:162730	81	36.975	ENSTNIG00000019802	sb:cb81	93	37.931	Tetraodon_nigroviridis
ENSGAFG00000009953	zgc:162730	66	39.931	ENSXETG00000016987	zfp36l1	68	39.583	Xenopus_tropicalis
ENSGAFG00000009953	zgc:162730	100	95.913	ENSXCOG00000012791	zgc:162730	100	95.913	Xiphophorus_couchianus
ENSGAFG00000009953	zgc:162730	100	96.394	ENSXMAG00000018206	zgc:162730	100	96.394	Xiphophorus_maculatus
ENSGAFG00000009953	zgc:162730	51	45.327	ENSXMAG00000004681	sb:cb81	76	39.595	Xiphophorus_maculatus