EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000009964 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt-like transcription factor 1a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 11329 bases
Position: chrNHOQ01000682.1:3447001-3458329
Accession: ZDB-GENE-020228-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	1	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	2	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	3	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	4	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	5	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	6	7
ENSGAFP00000014741	zf-C2H2	PF00096.26	4.7e-35	7	7
ENSGAFP00000014741	zf-met	PF12874.7	1e-23	1	5
ENSGAFP00000014741	zf-met	PF12874.7	1e-23	2	5
ENSGAFP00000014741	zf-met	PF12874.7	1e-23	3	5
ENSGAFP00000014741	zf-met	PF12874.7	1e-23	4	5
ENSGAFP00000014741	zf-met	PF12874.7	1e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000014889	-	5722	-	ENSGAFP00000014741	1309 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000009964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000009964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000009964	sall1a	79	63.415	ENSGAFG00000001581	sall3a	93	63.265
ENSGAFG00000009964	sall1a	59	50.943	ENSGAFG00000017066	-	70	50.943
ENSGAFG00000009964	sall1a	93	59.615	ENSGAFG00000014435	-	100	56.061
ENSGAFG00000009964	sall1a	92	65.385	ENSGAFG00000019925	sall4	96	65.385
ENSGAFG00000009964	sall1a	57	49.057	ENSGAFG00000012035	-	71	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000009964	sall1a	99	67.612	ENSG00000103449	SALL1	100	67.418	Homo_sapiens
ENSGAFG00000009964	sall1a	100	92.895	ENSAPOG00000022764	sall1a	100	92.895	Acanthochromis_polyacanthus
ENSGAFG00000009964	sall1a	99	66.866	ENSAMEG00000006817	SALL1	100	67.016	Ailuropoda_melanoleuca
ENSGAFG00000009964	sall1a	100	91.291	ENSACIG00000004231	sall1a	100	91.291	Amphilophus_citrinellus
ENSGAFG00000009964	sall1a	100	93.354	ENSAOCG00000002800	sall1a	100	93.354	Amphiprion_ocellaris
ENSGAFG00000009964	sall1a	100	93.125	ENSAPEG00000010179	sall1a	100	93.125	Amphiprion_percula
ENSGAFG00000009964	sall1a	99	91.131	ENSATEG00000003006	sall1a	99	91.131	Anabas_testudineus
ENSGAFG00000009964	sall1a	100	69.392	ENSAPLG00000003356	SALL1	100	69.617	Anas_platyrhynchos
ENSGAFG00000009964	sall1a	99	67.472	ENSACAG00000014399	SALL1	97	67.372	Anolis_carolinensis
ENSGAFG00000009964	sall1a	99	67.713	ENSANAG00000027238	SALL1	99	67.838	Aotus_nancymaae
ENSGAFG00000009964	sall1a	100	91.597	ENSACLG00000017148	sall1a	100	91.597	Astatotilapia_calliptera
ENSGAFG00000009964	sall1a	99	52.426	ENSAMXG00000017702	sall1b	99	52.701	Astyanax_mexicanus
ENSGAFG00000009964	sall1a	100	79.787	ENSAMXG00000018599	sall1a	100	80.243	Astyanax_mexicanus
ENSGAFG00000009964	sall1a	100	67.263	ENSBTAG00000008544	SALL1	100	67.414	Bos_taurus
ENSGAFG00000009964	sall1a	99	67.961	ENSCJAG00000001740	SALL1	99	68.178	Callithrix_jacchus
ENSGAFG00000009964	sall1a	99	66.866	ENSCAFG00000009755	SALL1	100	67.213	Canis_familiaris
ENSGAFG00000009964	sall1a	99	66.866	ENSCAFG00020002842	SALL1	100	67.213	Canis_lupus_dingo
ENSGAFG00000009964	sall1a	100	67.016	ENSCHIG00000026074	SALL1	100	67.365	Capra_hircus
ENSGAFG00000009964	sall1a	99	68.111	ENSTSYG00000029464	SALL1	99	68.161	Carlito_syrichta
ENSGAFG00000009964	sall1a	97	68.433	ENSCPOG00000006564	SALL1	99	68.409	Cavia_porcellus
ENSGAFG00000009964	sall1a	99	66.069	ENSCCAG00000001639	SALL1	100	66.194	Cebus_capucinus
ENSGAFG00000009964	sall1a	99	67.788	ENSCATG00000004982	SALL1	100	68.111	Cercocebus_atys
ENSGAFG00000009964	sall1a	99	67.788	ENSCLAG00000006380	SALL1	100	67.886	Chinchilla_lanigera
ENSGAFG00000009964	sall1a	99	67.115	ENSCSAG00000005319	SALL1	100	67.286	Chlorocebus_sabaeus
ENSGAFG00000009964	sall1a	66	66.016	ENSCHOG00000000800	-	69	66.275	Choloepus_hoffmanni
ENSGAFG00000009964	sall1a	100	69.242	ENSCPBG00000015924	SALL1	100	69.542	Chrysemys_picta_bellii
ENSGAFG00000009964	sall1a	99	68.165	ENSCANG00000036664	SALL1	100	68.240	Colobus_angolensis_palliatus
ENSGAFG00000009964	sall1a	99	66.716	ENSCGRG00001023314	-	100	67.015	Cricetulus_griseus_chok1gshd
ENSGAFG00000009964	sall1a	98	66.591	ENSCGRG00000009496	Sall1	100	66.895	Cricetulus_griseus_crigri
ENSGAFG00000009964	sall1a	99	88.567	ENSCSEG00000009349	sall1a	99	88.567	Cynoglossus_semilaevis
ENSGAFG00000009964	sall1a	90	94.497	ENSCVAG00000020513	sall1a	99	94.497	Cyprinodon_variegatus
ENSGAFG00000009964	sall1a	99	48.009	ENSDARG00000075891	sall1b	99	47.199	Danio_rerio
ENSGAFG00000009964	sall1a	100	79.242	ENSDARG00000074319	sall1a	100	78.864	Danio_rerio
ENSGAFG00000009964	sall1a	99	68.263	ENSDNOG00000016413	SALL1	100	68.263	Dasypus_novemcinctus
ENSGAFG00000009964	sall1a	98	67.506	ENSETEG00000015150	SALL1	99	67.737	Echinops_telfairi
ENSGAFG00000009964	sall1a	62	41.259	ENSEBUG00000008798	SALL1	94	35.714	Eptatretus_burgeri
ENSGAFG00000009964	sall1a	59	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSGAFG00000009964	sall1a	99	67.489	ENSEASG00005014602	SALL1	100	67.689	Equus_asinus_asinus
ENSGAFG00000009964	sall1a	90	65.622	ENSECAG00000011334	SALL1	99	65.813	Equus_caballus
ENSGAFG00000009964	sall1a	97	67.896	ENSEEUG00000002014	SALL1	99	67.769	Erinaceus_europaeus
ENSGAFG00000009964	sall1a	100	53.624	ENSELUG00000017774	-	100	54.228	Esox_lucius
ENSGAFG00000009964	sall1a	100	77.276	ENSELUG00000006159	sall1a	100	77.348	Esox_lucius
ENSGAFG00000009964	sall1a	99	66.069	ENSFCAG00000024654	SALL1	100	66.692	Felis_catus
ENSGAFG00000009964	sall1a	100	69.692	ENSFALG00000000074	SALL1	100	69.670	Ficedula_albicollis
ENSGAFG00000009964	sall1a	74	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSGAFG00000009964	sall1a	100	95.798	ENSFHEG00000012579	sall1a	100	95.798	Fundulus_heteroclitus
ENSGAFG00000009964	sall1a	100	83.638	ENSGMOG00000006103	sall1a	100	83.638	Gadus_morhua
ENSGAFG00000009964	sall1a	97	40.295	ENSGMOG00000013383	-	99	40.163	Gadus_morhua
ENSGAFG00000009964	sall1a	100	69.715	ENSGALG00000039238	SALL1	100	69.520	Gallus_gallus
ENSGAFG00000009964	sall1a	99	89.373	ENSGACG00000016702	sall1a	99	89.373	Gasterosteus_aculeatus
ENSGAFG00000009964	sall1a	100	69.190	ENSGAGG00000013979	SALL1	100	69.467	Gopherus_agassizii
ENSGAFG00000009964	sall1a	99	67.764	ENSGGOG00000000663	SALL1	100	67.913	Gorilla_gorilla
ENSGAFG00000009964	sall1a	100	91.520	ENSHBUG00000022005	sall1a	100	91.520	Haplochromis_burtoni
ENSGAFG00000009964	sall1a	99	68.386	ENSHGLG00000004288	-	100	68.559	Heterocephalus_glaber_female
ENSGAFG00000009964	sall1a	99	68.386	ENSHGLG00100017496	SALL1	100	68.559	Heterocephalus_glaber_male
ENSGAFG00000009964	sall1a	100	84.970	ENSHCOG00000000974	sall1a	100	84.894	Hippocampus_comes
ENSGAFG00000009964	sall1a	99	50.716	ENSIPUG00000022928	sall1b	99	50.490	Ictalurus_punctatus
ENSGAFG00000009964	sall1a	100	79.255	ENSIPUG00000016265	SALL1	100	78.479	Ictalurus_punctatus
ENSGAFG00000009964	sall1a	99	67.751	ENSSTOG00000020885	SALL1	100	68.249	Ictidomys_tridecemlineatus
ENSGAFG00000009964	sall1a	100	92.895	ENSKMAG00000016681	sall1a	100	92.895	Kryptolebias_marmoratus
ENSGAFG00000009964	sall1a	98	88.585	ENSLBEG00000012207	sall1a	95	88.585	Labrus_bergylta
ENSGAFG00000009964	sall1a	100	68.520	ENSLACG00000003556	SALL1	100	68.820	Latimeria_chalumnae
ENSGAFG00000009964	sall1a	97	37.785	ENSLACG00000014018	-	93	38.375	Latimeria_chalumnae
ENSGAFG00000009964	sall1a	100	78.038	ENSLOCG00000007283	sall1b	100	77.962	Lepisosteus_oculatus
ENSGAFG00000009964	sall1a	98	67.685	ENSLAFG00000015251	SALL1	99	67.933	Loxodonta_africana
ENSGAFG00000009964	sall1a	99	67.812	ENSMFAG00000003298	SALL1	100	67.955	Macaca_fascicularis
ENSGAFG00000009964	sall1a	93	67.633	ENSMMUG00000017200	SALL1	100	67.788	Macaca_mulatta
ENSGAFG00000009964	sall1a	93	67.739	ENSMNEG00000034770	SALL1	100	67.739	Macaca_nemestrina
ENSGAFG00000009964	sall1a	99	68.012	ENSMLEG00000036406	SALL1	100	68.087	Mandrillus_leucophaeus
ENSGAFG00000009964	sall1a	99	92.208	ENSMAMG00000004164	sall1a	99	92.208	Mastacembelus_armatus
ENSGAFG00000009964	sall1a	100	91.597	ENSMZEG00005006479	sall1a	100	91.597	Maylandia_zebra
ENSGAFG00000009964	sall1a	98	69.419	ENSMGAG00000004704	SALL1	100	69.319	Meleagris_gallopavo
ENSGAFG00000009964	sall1a	99	66.094	ENSMAUG00000019093	Sall1	100	66.194	Mesocricetus_auratus
ENSGAFG00000009964	sall1a	100	67.115	ENSMICG00000036486	SALL1	100	67.265	Microcebus_murinus
ENSGAFG00000009964	sall1a	99	90.443	ENSMMOG00000016400	sall1a	99	90.443	Mola_mola
ENSGAFG00000009964	sall1a	99	68.764	ENSMODG00000013114	SALL1	99	69.092	Monodelphis_domestica
ENSGAFG00000009964	sall1a	99	91.437	ENSMALG00000013400	sall1a	99	91.437	Monopterus_albus
ENSGAFG00000009964	sall1a	99	66.840	MGP_CAROLIEiJ_G0031362	Sall1	100	67.089	Mus_caroli
ENSGAFG00000009964	sall1a	99	66.568	ENSMUSG00000031665	Sall1	100	66.691	Mus_musculus
ENSGAFG00000009964	sall1a	99	66.964	MGP_PahariEiJ_G0022961	Sall1	100	66.939	Mus_pahari
ENSGAFG00000009964	sall1a	99	66.494	MGP_SPRETEiJ_G0032480	Sall1	100	66.617	Mus_spretus
ENSGAFG00000009964	sall1a	98	66.438	ENSMPUG00000003265	SALL1	96	66.565	Mustela_putorius_furo
ENSGAFG00000009964	sall1a	97	65.161	ENSMLUG00000015541	SALL1	99	65.904	Myotis_lucifugus
ENSGAFG00000009964	sall1a	100	91.749	ENSNBRG00000009307	sall1a	100	91.749	Neolamprologus_brichardi
ENSGAFG00000009964	sall1a	93	80.110	ENSNLEG00000001008	SALL1	99	79.670	Nomascus_leucogenys
ENSGAFG00000009964	sall1a	99	68.839	ENSMEUG00000012206	SALL1	99	69.040	Notamacropus_eugenii
ENSGAFG00000009964	sall1a	86	72.581	ENSOPRG00000005645	SALL1	71	72.247	Ochotona_princeps
ENSGAFG00000009964	sall1a	99	67.812	ENSODEG00000003685	SALL1	100	67.961	Octodon_degus
ENSGAFG00000009964	sall1a	100	92.131	ENSONIG00000002831	sall1a	100	92.131	Oreochromis_niloticus
ENSGAFG00000009964	sall1a	95	63.886	ENSOANG00000013399	SALL1	97	78.049	Ornithorhynchus_anatinus
ENSGAFG00000009964	sall1a	100	90.527	ENSORLG00000013827	sall1a	100	91.147	Oryzias_latipes
ENSGAFG00000009964	sall1a	100	90.527	ENSORLG00020020570	sall1a	100	90.527	Oryzias_latipes_hni
ENSGAFG00000009964	sall1a	100	90.527	ENSORLG00015018830	sall1a	100	91.231	Oryzias_latipes_hsok
ENSGAFG00000009964	sall1a	100	90.145	ENSOMEG00000016043	sall1a	100	90.437	Oryzias_melastigma
ENSGAFG00000009964	sall1a	99	67.886	ENSOGAG00000027316	SALL1	100	68.036	Otolemur_garnettii
ENSGAFG00000009964	sall1a	100	63.170	ENSOARG00000017583	SALL1	100	63.224	Ovis_aries
ENSGAFG00000009964	sall1a	97	51.314	ENSPPAG00000035136	-	98	51.464	Pan_paniscus
ENSGAFG00000009964	sall1a	98	67.808	ENSPPAG00000035657	SALL1	99	67.936	Pan_paniscus
ENSGAFG00000009964	sall1a	100	65.945	ENSPPRG00000023283	SALL1	100	66.667	Panthera_pardus
ENSGAFG00000009964	sall1a	80	71.241	ENSPTIG00000013539	-	94	71.267	Panthera_tigris_altaica
ENSGAFG00000009964	sall1a	96	51.252	ENSPTRG00000045256	-	97	51.567	Pan_troglodytes
ENSGAFG00000009964	sall1a	99	67.564	ENSPTRG00000008108	SALL1	100	67.910	Pan_troglodytes
ENSGAFG00000009964	sall1a	99	67.937	ENSPANG00000024176	SALL1	100	68.012	Papio_anubis
ENSGAFG00000009964	sall1a	100	70.432	ENSPKIG00000005383	-	100	70.909	Paramormyrops_kingsleyae
ENSGAFG00000009964	sall1a	100	72.151	ENSPKIG00000022251	sall1a	100	72.226	Paramormyrops_kingsleyae
ENSGAFG00000009964	sall1a	100	69.617	ENSPSIG00000008582	SALL1	100	69.790	Pelodiscus_sinensis
ENSGAFG00000009964	sall1a	99	84.012	ENSPMGG00000021788	sall1a	99	84.012	Periophthalmus_magnuspinnatus
ENSGAFG00000009964	sall1a	99	47.609	ENSPMAG00000008148	sall1b	98	48.349	Petromyzon_marinus
ENSGAFG00000009964	sall1a	99	68.811	ENSPCIG00000017840	SALL1	99	68.966	Phascolarctos_cinereus
ENSGAFG00000009964	sall1a	98	98.446	ENSPFOG00000015799	sall1a	96	98.446	Poecilia_formosa
ENSGAFG00000009964	sall1a	100	98.701	ENSPLAG00000022539	sall1a	100	98.701	Poecilia_latipinna
ENSGAFG00000009964	sall1a	100	98.854	ENSPMEG00000020894	sall1a	100	98.854	Poecilia_mexicana
ENSGAFG00000009964	sall1a	100	98.396	ENSPREG00000006802	sall1a	100	98.396	Poecilia_reticulata
ENSGAFG00000009964	sall1a	90	66.527	ENSPPYG00000007345	SALL1	96	66.778	Pongo_abelii
ENSGAFG00000009964	sall1a	84	71.605	ENSPCAG00000008162	SALL1	93	71.605	Procavia_capensis
ENSGAFG00000009964	sall1a	99	67.165	ENSPCOG00000028192	SALL1	100	67.412	Propithecus_coquereli
ENSGAFG00000009964	sall1a	66	69.515	ENSPVAG00000015374	SALL1	100	69.480	Pteropus_vampyrus
ENSGAFG00000009964	sall1a	100	91.673	ENSPNYG00000010865	sall1a	100	91.673	Pundamilia_nyererei
ENSGAFG00000009964	sall1a	99	53.483	ENSPNAG00000007442	sall1b	99	53.478	Pygocentrus_nattereri
ENSGAFG00000009964	sall1a	100	78.056	ENSPNAG00000023644	sall1a	100	78.512	Pygocentrus_nattereri
ENSGAFG00000009964	sall1a	69	65.306	ENSPNAG00000028248	-	71	65.306	Pygocentrus_nattereri
ENSGAFG00000009964	sall1a	100	67.016	ENSRNOG00000013907	Sall1	100	67.065	Rattus_norvegicus
ENSGAFG00000009964	sall1a	93	67.526	ENSRBIG00000015707	SALL1	100	67.952	Rhinopithecus_bieti
ENSGAFG00000009964	sall1a	97	67.948	ENSRROG00000035777	SALL1	100	68.032	Rhinopithecus_roxellana
ENSGAFG00000009964	sall1a	99	67.737	ENSSBOG00000032186	SALL1	99	68.036	Saimiri_boliviensis_boliviensis
ENSGAFG00000009964	sall1a	99	68.642	ENSSHAG00000009477	SALL1	99	68.619	Sarcophilus_harrisii
ENSGAFG00000009964	sall1a	100	72.830	ENSSFOG00015020020	sall1a	100	72.755	Scleropages_formosus
ENSGAFG00000009964	sall1a	98	72.132	ENSSFOG00015001590	sall1a	99	72.132	Scleropages_formosus
ENSGAFG00000009964	sall1a	99	91.284	ENSSMAG00000009160	sall1a	99	91.284	Scophthalmus_maximus
ENSGAFG00000009964	sall1a	99	92.890	ENSSDUG00000006507	sall1a	99	92.890	Seriola_dumerili
ENSGAFG00000009964	sall1a	99	92.890	ENSSLDG00000017721	sall1a	99	92.890	Seriola_lalandi_dorsalis
ENSGAFG00000009964	sall1a	97	67.049	ENSSARG00000000661	SALL1	99	67.355	Sorex_araneus
ENSGAFG00000009964	sall1a	100	68.867	ENSSPUG00000000156	SALL1	100	69.213	Sphenodon_punctatus
ENSGAFG00000009964	sall1a	100	93.206	ENSSPAG00000021615	sall1a	100	93.206	Stegastes_partitus
ENSGAFG00000009964	sall1a	99	66.916	ENSSSCG00000002836	SALL1	100	67.114	Sus_scrofa
ENSGAFG00000009964	sall1a	100	69.542	ENSTGUG00000007514	SALL1	100	69.369	Taeniopygia_guttata
ENSGAFG00000009964	sall1a	91	86.527	ENSTRUG00000008950	sall1a	100	86.527	Takifugu_rubripes
ENSGAFG00000009964	sall1a	92	85.083	ENSTNIG00000004257	sall1a	100	85.083	Tetraodon_nigroviridis
ENSGAFG00000009964	sall1a	72	75.676	ENSTBEG00000002119	-	53	75.676	Tupaia_belangeri
ENSGAFG00000009964	sall1a	90	65.717	ENSUAMG00000023379	-	92	66.134	Ursus_americanus
ENSGAFG00000009964	sall1a	90	65.829	ENSVVUG00000019383	-	99	66.137	Vulpes_vulpes
ENSGAFG00000009964	sall1a	97	34.043	ENSXETG00000017176	sall2	94	38.296	Xenopus_tropicalis
ENSGAFG00000009964	sall1a	100	65.839	ENSXETG00000018417	sall1	100	65.912	Xenopus_tropicalis
ENSGAFG00000009964	sall1a	100	98.701	ENSXMAG00000016273	sall1a	100	98.701	Xiphophorus_maculatus