EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010014 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 87646 bases
Position: chrNHOQ01000682.1:3852548-3940193
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014879	ResIII	PF04851.15	1.9e-06	1	1
ENSGAFP00000014861	ResIII	PF04851.15	1.4e-05	1	1
ENSGAFP00000014879	BRK	PF07533.16	3.4e-32	1	2
ENSGAFP00000014879	BRK	PF07533.16	3.4e-32	2	2
ENSGAFP00000014861	BRK	PF07533.16	5.3e-32	1	2
ENSGAFP00000014861	BRK	PF07533.16	5.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015027	-	10104	-	ENSGAFP00000014879	2488 (aa)	-	-
ENSGAFT00000015009	-	12119	-	ENSGAFP00000014861	2991 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010014	chd9	55	69.753	ENSGAFG00000006858	chd7	53	66.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010014	chd9	99	67.498	ENSG00000177200	CHD9	97	68.623	Homo_sapiens
ENSGAFG00000010014	chd9	99	90.813	ENSAPOG00000023034	chd9	99	89.783	Acanthochromis_polyacanthus
ENSGAFG00000010014	chd9	98	68.349	ENSAMEG00000016232	CHD9	84	70.725	Ailuropoda_melanoleuca
ENSGAFG00000010014	chd9	97	83.846	ENSACIG00000004097	chd9	98	77.907	Amphilophus_citrinellus
ENSGAFG00000010014	chd9	99	90.584	ENSAOCG00000005487	chd9	99	90.060	Amphiprion_ocellaris
ENSGAFG00000010014	chd9	99	90.543	ENSAPEG00000009859	chd9	99	90.060	Amphiprion_percula
ENSGAFG00000010014	chd9	99	88.584	ENSATEG00000002748	chd9	99	83.222	Anabas_testudineus
ENSGAFG00000010014	chd9	98	68.745	ENSAPLG00000002826	CHD9	61	76.960	Anas_platyrhynchos
ENSGAFG00000010014	chd9	68	74.971	ENSACAG00000016150	CHD9	83	71.356	Anolis_carolinensis
ENSGAFG00000010014	chd9	99	59.798	ENSANAG00000015630	CHD9	93	68.531	Aotus_nancymaae
ENSGAFG00000010014	chd9	98	86.596	ENSACLG00000016899	chd9	99	80.556	Astatotilapia_calliptera
ENSGAFG00000010014	chd9	99	76.529	ENSAMXG00000005652	chd9	99	76.607	Astyanax_mexicanus
ENSGAFG00000010014	chd9	98	68.039	ENSBTAG00000002287	CHD9	84	70.474	Bos_taurus
ENSGAFG00000010014	chd9	98	68.147	ENSCJAG00000001573	CHD9	93	68.881	Callithrix_jacchus
ENSGAFG00000010014	chd9	67	74.926	ENSCAFG00000009699	CHD9	84	70.839	Canis_familiaris
ENSGAFG00000010014	chd9	67	74.926	ENSCAFG00020002879	CHD9	91	69.580	Canis_lupus_dingo
ENSGAFG00000010014	chd9	98	67.601	ENSTSYG00000007693	CHD9	91	69.231	Carlito_syrichta
ENSGAFG00000010014	chd9	91	58.030	ENSCAPG00000011604	CHD9	78	60.623	Cavia_aperea
ENSGAFG00000010014	chd9	67	70.161	ENSCPOG00000036544	CHD9	83	66.582	Cavia_porcellus
ENSGAFG00000010014	chd9	99	60.138	ENSCCAG00000036178	CHD9	93	69.474	Cebus_capucinus
ENSGAFG00000010014	chd9	67	74.806	ENSCATG00000036753	CHD9	91	68.966	Cercocebus_atys
ENSGAFG00000010014	chd9	98	67.788	ENSCLAG00000007137	CHD9	99	77.258	Chinchilla_lanigera
ENSGAFG00000010014	chd9	67	74.747	ENSCSAG00000005311	CHD9	84	70.021	Chlorocebus_sabaeus
ENSGAFG00000010014	chd9	67	91.146	ENSCHOG00000003935	CHD9	55	91.099	Choloepus_hoffmanni
ENSGAFG00000010014	chd9	90	82.027	ENSCPBG00000012459	CHD9	83	79.529	Chrysemys_picta_bellii
ENSGAFG00000010014	chd9	92	65.873	ENSCANG00000030349	CHD9	91	69.580	Colobus_angolensis_palliatus
ENSGAFG00000010014	chd9	98	67.765	ENSCGRG00001016150	Chd9	84	69.839	Cricetulus_griseus_chok1gshd
ENSGAFG00000010014	chd9	98	67.765	ENSCGRG00000012850	Chd9	99	76.966	Cricetulus_griseus_crigri
ENSGAFG00000010014	chd9	99	85.372	ENSCSEG00000009209	chd9	99	83.340	Cynoglossus_semilaevis
ENSGAFG00000010014	chd9	97	92.807	ENSCVAG00000016195	chd9	99	87.992	Cyprinodon_variegatus
ENSGAFG00000010014	chd9	99	75.698	ENSDARG00000074498	chd9	97	76.611	Danio_rerio
ENSGAFG00000010014	chd9	95	68.842	ENSDNOG00000006045	CHD9	96	70.593	Dasypus_novemcinctus
ENSGAFG00000010014	chd9	81	69.067	ENSDORG00000008523	-	96	70.621	Dipodomys_ordii
ENSGAFG00000010014	chd9	85	92.063	ENSETEG00000009565	CHD9	71	91.935	Echinops_telfairi
ENSGAFG00000010014	chd9	86	77.540	ENSEASG00005014832	CHD9	96	78.214	Equus_asinus_asinus
ENSGAFG00000010014	chd9	92	66.271	ENSECAG00000011505	CHD9	84	70.113	Equus_caballus
ENSGAFG00000010014	chd9	75	86.522	ENSEEUG00000014515	CHD9	72	84.530	Erinaceus_europaeus
ENSGAFG00000010014	chd9	97	78.058	ENSELUG00000006031	chd9	99	77.485	Esox_lucius
ENSGAFG00000010014	chd9	98	68.071	ENSFCAG00000022534	CHD9	91	69.930	Felis_catus
ENSGAFG00000010014	chd9	99	68.448	ENSFALG00000013276	CHD9	97	69.776	Ficedula_albicollis
ENSGAFG00000010014	chd9	99	59.610	ENSFDAG00000021037	CHD9	85	69.653	Fukomys_damarensis
ENSGAFG00000010014	chd9	99	94.777	ENSFHEG00000006068	chd9	99	93.968	Fundulus_heteroclitus
ENSGAFG00000010014	chd9	80	86.983	ENSGMOG00000006040	chd9	84	86.703	Gadus_morhua
ENSGAFG00000010014	chd9	93	71.048	ENSGALG00000039178	CHD9	84	71.779	Gallus_gallus
ENSGAFG00000010014	chd9	92	65.770	ENSGGOG00000014816	CHD9	93	69.231	Gorilla_gorilla
ENSGAFG00000010014	chd9	99	86.230	ENSHBUG00000023322	chd9	99	86.632	Haplochromis_burtoni
ENSGAFG00000010014	chd9	98	68.047	ENSHGLG00000014938	CHD9	96	80.380	Heterocephalus_glaber_female
ENSGAFG00000010014	chd9	96	82.225	ENSHCOG00000000937	chd9	97	82.001	Hippocampus_comes
ENSGAFG00000010014	chd9	99	76.852	ENSIPUG00000016448	chd9	96	77.902	Ictalurus_punctatus
ENSGAFG00000010014	chd9	98	68.255	ENSSTOG00000022273	CHD9	99	76.633	Ictidomys_tridecemlineatus
ENSGAFG00000010014	chd9	65	70.965	ENSJJAG00000015741	-	96	70.850	Jaculus_jaculus
ENSGAFG00000010014	chd9	96	90.522	ENSKMAG00000016784	chd9	99	89.550	Kryptolebias_marmoratus
ENSGAFG00000010014	chd9	99	87.370	ENSLBEG00000012077	chd9	99	87.405	Labrus_bergylta
ENSGAFG00000010014	chd9	95	66.296	ENSLACG00000005557	CHD9	79	66.625	Latimeria_chalumnae
ENSGAFG00000010014	chd9	98	76.208	ENSLOCG00000007225	chd9	98	76.555	Lepisosteus_oculatus
ENSGAFG00000010014	chd9	67	74.762	ENSLAFG00000015374	CHD9	84	69.558	Loxodonta_africana
ENSGAFG00000010014	chd9	94	69.092	ENSMFAG00000041354	CHD9	94	70.228	Macaca_fascicularis
ENSGAFG00000010014	chd9	67	74.866	ENSMMUG00000016310	CHD9	91	69.580	Macaca_mulatta
ENSGAFG00000010014	chd9	99	59.362	ENSMNEG00000031494	CHD9	85	71.847	Macaca_nemestrina
ENSGAFG00000010014	chd9	67	74.806	ENSMLEG00000043219	CHD9	91	69.580	Mandrillus_leucophaeus
ENSGAFG00000010014	chd9	99	88.624	ENSMAMG00000003909	chd9	99	82.578	Mastacembelus_armatus
ENSGAFG00000010014	chd9	99	88.599	ENSMZEG00005006581	chd9	99	88.358	Maylandia_zebra
ENSGAFG00000010014	chd9	98	64.437	ENSMGAG00000004642	CHD9	59	72.606	Meleagris_gallopavo
ENSGAFG00000010014	chd9	98	68.697	ENSMICG00000016679	CHD9	91	69.930	Microcebus_murinus
ENSGAFG00000010014	chd9	97	83.545	ENSMMOG00000016406	chd9	99	77.087	Mola_mola
ENSGAFG00000010014	chd9	86	75.516	ENSMODG00000013142	-	96	77.092	Monodelphis_domestica
ENSGAFG00000010014	chd9	97	85.556	ENSMALG00000013306	chd9	99	79.861	Monopterus_albus
ENSGAFG00000010014	chd9	95	68.894	MGP_CAROLIEiJ_G0031364	Chd9	84	69.881	Mus_caroli
ENSGAFG00000010014	chd9	98	67.552	ENSMUSG00000056608	Chd9	99	76.106	Mus_musculus
ENSGAFG00000010014	chd9	98	66.748	MGP_PahariEiJ_G0022964	Chd9	84	69.119	Mus_pahari
ENSGAFG00000010014	chd9	98	67.405	MGP_SPRETEiJ_G0032483	Chd9	84	69.528	Mus_spretus
ENSGAFG00000010014	chd9	92	66.194	ENSMPUG00000003285	CHD9	84	70.695	Mustela_putorius_furo
ENSGAFG00000010014	chd9	67	74.509	ENSMLUG00000004456	CHD9	84	69.631	Myotis_lucifugus
ENSGAFG00000010014	chd9	99	89.369	ENSNBRG00000009423	chd9	99	89.127	Neolamprologus_brichardi
ENSGAFG00000010014	chd9	85	71.061	ENSNLEG00000001026	CHD9	85	71.968	Nomascus_leucogenys
ENSGAFG00000010014	chd9	73	93.985	ENSMEUG00000008222	-	74	88.125	Notamacropus_eugenii
ENSGAFG00000010014	chd9	90	66.038	ENSODEG00000004466	CHD9	84	69.937	Octodon_degus
ENSGAFG00000010014	chd9	97	87.951	ENSONIG00000002816	chd9	98	87.623	Oreochromis_niloticus
ENSGAFG00000010014	chd9	67	75.756	ENSOANG00000013401	CHD9	84	71.026	Ornithorhynchus_anatinus
ENSGAFG00000010014	chd9	99	67.524	ENSOCUG00000001016	CHD9	96	68.854	Oryctolagus_cuniculus
ENSGAFG00000010014	chd9	96	87.866	ENSORLG00000013810	chd9	96	85.591	Oryzias_latipes
ENSGAFG00000010014	chd9	97	82.957	ENSORLG00020020665	chd9	99	77.045	Oryzias_latipes_hni
ENSGAFG00000010014	chd9	98	87.318	ENSORLG00015019126	chd9	97	87.637	Oryzias_latipes_hsok
ENSGAFG00000010014	chd9	55	91.095	ENSOMEG00000015978	chd9	99	83.491	Oryzias_melastigma
ENSGAFG00000010014	chd9	98	67.923	ENSOGAG00000002110	CHD9	79	70.118	Otolemur_garnettii
ENSGAFG00000010014	chd9	91	65.812	ENSOARG00000017664	CHD9	84	69.966	Ovis_aries
ENSGAFG00000010014	chd9	98	67.042	ENSPPAG00000039388	-	96	68.980	Pan_paniscus
ENSGAFG00000010014	chd9	98	68.071	ENSPPRG00000004801	CHD9	91	69.580	Panthera_pardus
ENSGAFG00000010014	chd9	98	66.947	ENSPTIG00000021854	CHD9	84	69.250	Panthera_tigris_altaica
ENSGAFG00000010014	chd9	99	59.538	ENSPTRG00000008113	CHD9	93	69.231	Pan_troglodytes
ENSGAFG00000010014	chd9	99	67.286	ENSPANG00000019307	CHD9	97	68.597	Papio_anubis
ENSGAFG00000010014	chd9	97	77.321	ENSPKIG00000021876	chd9	96	78.699	Paramormyrops_kingsleyae
ENSGAFG00000010014	chd9	97	69.947	ENSPKIG00000025401	-	81	70.799	Paramormyrops_kingsleyae
ENSGAFG00000010014	chd9	56	76.918	ENSPSIG00000008099	CHD9	71	78.277	Pelodiscus_sinensis
ENSGAFG00000010014	chd9	85	70.324	ENSPCIG00000017215	CHD9	91	76.978	Phascolarctos_cinereus
ENSGAFG00000010014	chd9	100	98.195	ENSPFOG00000015839	chd9	100	98.195	Poecilia_formosa
ENSGAFG00000010014	chd9	100	98.295	ENSPLAG00000011118	chd9	100	98.295	Poecilia_latipinna
ENSGAFG00000010014	chd9	99	94.669	ENSPMEG00000015106	chd9	99	93.349	Poecilia_mexicana
ENSGAFG00000010014	chd9	100	98.432	ENSPREG00000006473	chd9	100	98.432	Poecilia_reticulata
ENSGAFG00000010014	chd9	99	59.635	ENSPPYG00000007348	CHD9	85	69.900	Pongo_abelii
ENSGAFG00000010014	chd9	69	79.603	ENSPCAG00000007564	CHD9	74	81.878	Procavia_capensis
ENSGAFG00000010014	chd9	92	64.579	ENSPCOG00000028433	CHD9	91	68.881	Propithecus_coquereli
ENSGAFG00000010014	chd9	63	72.270	ENSPVAG00000015617	CHD9	81	73.806	Pteropus_vampyrus
ENSGAFG00000010014	chd9	99	88.398	ENSPNYG00000010947	chd9	99	87.635	Pundamilia_nyererei
ENSGAFG00000010014	chd9	99	76.510	ENSPNAG00000024141	chd9	97	77.664	Pygocentrus_nattereri
ENSGAFG00000010014	chd9	86	67.299	ENSRNOG00000049302	Chd9	94	56.309	Rattus_norvegicus
ENSGAFG00000010014	chd9	98	67.843	ENSRBIG00000035553	CHD9	95	70.189	Rhinopithecus_bieti
ENSGAFG00000010014	chd9	96	68.699	ENSRROG00000033278	CHD9	96	70.232	Rhinopithecus_roxellana
ENSGAFG00000010014	chd9	98	67.871	ENSSBOG00000030240	CHD9	93	68.881	Saimiri_boliviensis_boliviensis
ENSGAFG00000010014	chd9	98	67.916	ENSSHAG00000002719	CHD9	84	70.611	Sarcophilus_harrisii
ENSGAFG00000010014	chd9	99	72.484	ENSSFOG00015001327	chd9	96	73.615	Scleropages_formosus
ENSGAFG00000010014	chd9	95	78.425	ENSSFOG00015020209	chd9	97	78.019	Scleropages_formosus
ENSGAFG00000010014	chd9	96	89.517	ENSSMAG00000008953	chd9	99	88.479	Scophthalmus_maximus
ENSGAFG00000010014	chd9	99	90.133	ENSSDUG00000006139	chd9	99	89.931	Seriola_dumerili
ENSGAFG00000010014	chd9	99	89.438	ENSSLDG00000017818	chd9	99	89.237	Seriola_lalandi_dorsalis
ENSGAFG00000010014	chd9	63	77.352	ENSSARG00000010632	CHD9	53	77.224	Sorex_araneus
ENSGAFG00000010014	chd9	99	90.145	ENSSPAG00000021649	chd9	99	89.783	Stegastes_partitus
ENSGAFG00000010014	chd9	91	65.099	ENSSSCG00000033591	CHD9	61	75.650	Sus_scrofa
ENSGAFG00000010014	chd9	86	71.774	ENSTGUG00000007476	CHD9	86	72.537	Taeniopygia_guttata
ENSGAFG00000010014	chd9	99	84.463	ENSTRUG00000009125	chd9	99	77.333	Takifugu_rubripes
ENSGAFG00000010014	chd9	76	69.676	ENSTNIG00000003825	chd9	85	98.817	Tetraodon_nigroviridis
ENSGAFG00000010014	chd9	60	94.915	ENSTBEG00000016052	-	61	94.737	Tupaia_belangeri
ENSGAFG00000010014	chd9	84	70.783	ENSTTRG00000012674	CHD9	77	70.731	Tursiops_truncatus
ENSGAFG00000010014	chd9	76	66.788	ENSUAMG00000022706	CHD9	95	68.641	Ursus_americanus
ENSGAFG00000010014	chd9	75	86.102	ENSUMAG00000004043	CHD9	95	85.893	Ursus_maritimus
ENSGAFG00000010014	chd9	64	75.661	ENSVPAG00000001374	CHD9	81	69.182	Vicugna_pacos
ENSGAFG00000010014	chd9	67	74.866	ENSVVUG00000019435	CHD9	84	70.796	Vulpes_vulpes
ENSGAFG00000010014	chd9	93	68.948	ENSXETG00000000349	chd9	77	75.932	Xenopus_tropicalis
ENSGAFG00000010014	chd9	99	96.553	ENSXCOG00000012997	chd9	99	96.553	Xiphophorus_couchianus
ENSGAFG00000010014	chd9	100	98.483	ENSXMAG00000016192	chd9	100	98.483	Xiphophorus_maculatus