EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010053 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11764 bases
Position: chrNHOQ01002390.1:13773250-13785013
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014899	zf-C2H2	PF00096.26	1e-28	1	4
ENSGAFP00000014899	zf-C2H2	PF00096.26	1e-28	2	4
ENSGAFP00000014899	zf-C2H2	PF00096.26	1e-28	3	4
ENSGAFP00000014899	zf-C2H2	PF00096.26	1e-28	4	4
ENSGAFP00000014890	zf-C2H2	PF00096.26	4.5e-23	1	3
ENSGAFP00000014890	zf-C2H2	PF00096.26	4.5e-23	2	3
ENSGAFP00000014890	zf-C2H2	PF00096.26	4.5e-23	3	3
ENSGAFP00000014899	zf-met	PF12874.7	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015047	-	2109	-	ENSGAFP00000014899	702 (aa)	-	-
ENSGAFT00000015038	-	5924	-	ENSGAFP00000014890	649 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010053	patz1	59	35.099	ENSGAFG00000003108	-	86	33.889
ENSGAFG00000010053	patz1	53	31.559	ENSGAFG00000011938	-	69	32.031
ENSGAFG00000010053	patz1	50	35.433	ENSGAFG00000013420	-	65	38.532
ENSGAFG00000010053	patz1	74	36.842	ENSGAFG00000002506	ZBTB14	92	35.417
ENSGAFG00000010053	patz1	55	30.924	ENSGAFG00000003150	-	82	36.970
ENSGAFG00000010053	patz1	57	31.933	ENSGAFG00000010259	zbtb16a	58	31.933
ENSGAFG00000010053	patz1	63	31.081	ENSGAFG00000021891	znf319b	79	31.515
ENSGAFG00000010053	patz1	53	31.841	ENSGAFG00000013048	-	68	37.126
ENSGAFG00000010053	patz1	50	38.532	ENSGAFG00000013055	-	64	38.532
ENSGAFG00000010053	patz1	59	33.171	ENSGAFG00000011884	-	93	37.931
ENSGAFG00000010053	patz1	50	35.256	ENSGAFG00000013624	-	54	40.909
ENSGAFG00000010053	patz1	63	30.409	ENSGAFG00000005337	-	85	32.632
ENSGAFG00000010053	patz1	67	32.895	ENSGAFG00000013934	-	98	31.873
ENSGAFG00000010053	patz1	57	30.638	ENSGAFG00000011965	-	78	35.870
ENSGAFG00000010053	patz1	51	34.694	ENSGAFG00000012987	-	66	35.542
ENSGAFG00000010053	patz1	55	34.783	ENSGAFG00000013252	zbtb16b	59	34.783
ENSGAFG00000010053	patz1	54	32.031	ENSGAFG00000019072	-	88	32.031
ENSGAFG00000010053	patz1	53	31.414	ENSGAFG00000007110	-	62	32.927
ENSGAFG00000010053	patz1	67	36.607	ENSGAFG00000008457	zbtb41	84	30.412
ENSGAFG00000010053	patz1	61	31.855	ENSGAFG00000002659	-	64	31.301
ENSGAFG00000010053	patz1	52	32.773	ENSGAFG00000018031	hic2	52	41.237
ENSGAFG00000010053	patz1	60	30.366	ENSGAFG00000021140	-	99	32.432
ENSGAFG00000010053	patz1	65	31.597	ENSGAFG00000013677	-	91	35.849
ENSGAFG00000010053	patz1	50	31.579	ENSGAFG00000014085	-	64	37.349
ENSGAFG00000010053	patz1	51	32.061	ENSGAFG00000014088	-	63	35.294
ENSGAFG00000010053	patz1	53	30.887	ENSGAFG00000013471	-	68	40.462
ENSGAFG00000010053	patz1	52	36.471	ENSGAFG00000013969	-	93	35.928
ENSGAFG00000010053	patz1	69	31.760	ENSGAFG00000008226	-	72	35.326
ENSGAFG00000010053	patz1	74	32.411	ENSGAFG00000018302	-	73	31.868
ENSGAFG00000010053	patz1	57	32.287	ENSGAFG00000007098	-	84	34.857
ENSGAFG00000010053	patz1	51	30.588	ENSGAFG00000013616	-	71	37.126
ENSGAFG00000010053	patz1	51	32.751	ENSGAFG00000018645	-	64	33.333
ENSGAFG00000010053	patz1	65	38.710	ENSGAFG00000007358	bcl6ab	60	38.710
ENSGAFG00000010053	patz1	59	31.752	ENSGAFG00000013363	-	76	32.331
ENSGAFG00000010053	patz1	50	33.908	ENSGAFG00000016093	-	67	36.957
ENSGAFG00000010053	patz1	64	34.043	ENSGAFG00000012953	-	70	34.043
ENSGAFG00000010053	patz1	50	32.824	ENSGAFG00000013605	-	95	35.429
ENSGAFG00000010053	patz1	51	31.489	ENSGAFG00000018659	-	98	35.119
ENSGAFG00000010053	patz1	51	30.918	ENSGAFG00000011906	-	61	32.804
ENSGAFG00000010053	patz1	58	30.833	ENSGAFG00000012767	-	78	30.672
ENSGAFG00000010053	patz1	59	30.328	ENSGAFG00000011326	-	94	34.615
ENSGAFG00000010053	patz1	60	30.769	ENSGAFG00000013491	-	66	34.463
ENSGAFG00000010053	patz1	52	37.410	ENSGAFG00000016595	-	80	38.636
ENSGAFG00000010053	patz1	50	34.228	ENSGAFG00000020507	-	51	39.865
ENSGAFG00000010053	patz1	51	34.706	ENSGAFG00000020505	-	60	40.351
ENSGAFG00000010053	patz1	52	30.928	ENSGAFG00000012733	-	57	30.964
ENSGAFG00000010053	patz1	71	30.147	ENSGAFG00000005321	zbtb47b	81	40.146
ENSGAFG00000010053	patz1	50	34.043	ENSGAFG00000010983	-	82	34.043
ENSGAFG00000010053	patz1	50	38.356	ENSGAFG00000017066	-	64	37.584
ENSGAFG00000010053	patz1	52	30.657	ENSGAFG00000017761	-	81	36.842
ENSGAFG00000010053	patz1	60	30.357	ENSGAFG00000007104	-	60	37.500
ENSGAFG00000010053	patz1	62	34.545	ENSGAFG00000018820	-	73	33.740
ENSGAFG00000010053	patz1	54	33.476	ENSGAFG00000021131	-	80	34.529
ENSGAFG00000010053	patz1	60	32.707	ENSGAFG00000021132	-	59	38.333
ENSGAFG00000010053	patz1	73	36.478	ENSGAFG00000018429	zbtb24	64	31.285
ENSGAFG00000010053	patz1	53	37.255	ENSGAFG00000011924	-	74	38.235
ENSGAFG00000010053	patz1	66	31.034	ENSGAFG00000008274	-	97	33.149
ENSGAFG00000010053	patz1	56	34.328	ENSGAFG00000013438	-	98	34.228
ENSGAFG00000010053	patz1	50	32.990	ENSGAFG00000013430	-	98	37.419
ENSGAFG00000010053	patz1	51	31.769	ENSGAFG00000001156	-	63	37.234
ENSGAFG00000010053	patz1	55	34.532	ENSGAFG00000012945	-	58	34.532
ENSGAFG00000010053	patz1	50	33.333	ENSGAFG00000011999	-	74	38.323
ENSGAFG00000010053	patz1	51	30.800	ENSGAFG00000016976	-	59	35.260
ENSGAFG00000010053	patz1	51	37.255	ENSGAFG00000013390	-	68	38.095
ENSGAFG00000010053	patz1	50	36.301	ENSGAFG00000013396	-	74	36.301
ENSGAFG00000010053	patz1	53	32.189	ENSGAFG00000014362	-	58	39.157
ENSGAFG00000010053	patz1	53	34.524	ENSGAFG00000014369	-	94	35.882
ENSGAFG00000010053	patz1	53	35.252	ENSGAFG00000008204	-	67	35.294
ENSGAFG00000010053	patz1	53	30.000	ENSGAFG00000000037	-	66	36.264
ENSGAFG00000010053	patz1	57	30.516	ENSGAFG00000012977	-	89	31.604
ENSGAFG00000010053	patz1	59	31.466	ENSGAFG00000020499	-	59	35.354
ENSGAFG00000010053	patz1	59	32.218	ENSGAFG00000014413	-	71	33.742
ENSGAFG00000010053	patz1	57	31.200	ENSGAFG00000012035	-	84	38.415
ENSGAFG00000010053	patz1	53	32.663	ENSGAFG00000016587	-	88	33.526
ENSGAFG00000010053	patz1	70	33.557	ENSGAFG00000015673	PRDM15	51	33.557
ENSGAFG00000010053	patz1	58	31.646	ENSGAFG00000016322	-	64	30.645
ENSGAFG00000010053	patz1	62	31.739	ENSGAFG00000019233	prdm5	71	31.977
ENSGAFG00000010053	patz1	54	34.074	ENSGAFG00000014419	-	60	38.554
ENSGAFG00000010053	patz1	50	32.530	ENSGAFG00000011940	-	70	37.736
ENSGAFG00000010053	patz1	52	31.707	ENSGAFG00000013452	-	69	38.012
ENSGAFG00000010053	patz1	53	36.434	ENSGAFG00000013457	-	57	37.864
ENSGAFG00000010053	patz1	57	37.126	ENSGAFG00000012069	-	87	39.024
ENSGAFG00000010053	patz1	63	34.211	ENSGAFG00000014188	-	96	32.524
ENSGAFG00000010053	patz1	50	30.396	ENSGAFG00000011290	-	54	35.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010053	patz1	100	57.856	ENSG00000100105	PATZ1	100	59.029	Homo_sapiens
ENSGAFG00000010053	patz1	100	89.495	ENSAPOG00000018447	patz1	100	89.495	Acanthochromis_polyacanthus
ENSGAFG00000010053	patz1	100	54.420	ENSAMEG00000007074	PATZ1	100	54.219	Ailuropoda_melanoleuca
ENSGAFG00000010053	patz1	100	81.818	ENSACIG00000016779	patz1	100	82.927	Amphilophus_citrinellus
ENSGAFG00000010053	patz1	100	88.685	ENSAPEG00000013354	patz1	100	88.685	Amphiprion_percula
ENSGAFG00000010053	patz1	100	86.061	ENSATEG00000011260	patz1	100	86.555	Anabas_testudineus
ENSGAFG00000010053	patz1	88	53.226	ENSAPLG00000003934	PATZ1	99	53.710	Anas_platyrhynchos
ENSGAFG00000010053	patz1	100	57.856	ENSANAG00000029603	PATZ1	100	59.029	Aotus_nancymaae
ENSGAFG00000010053	patz1	91	86.395	ENSAMXG00000002273	patz1	100	63.588	Astyanax_mexicanus
ENSGAFG00000010053	patz1	100	57.856	ENSBTAG00000005478	PATZ1	100	58.721	Bos_taurus
ENSGAFG00000010053	patz1	100	57.856	ENSCJAG00000010978	PATZ1	100	59.029	Callithrix_jacchus
ENSGAFG00000010053	patz1	100	57.856	ENSCAFG00000013087	PATZ1	99	58.721	Canis_familiaris
ENSGAFG00000010053	patz1	100	57.856	ENSCHIG00000020203	PATZ1	100	58.721	Capra_hircus
ENSGAFG00000010053	patz1	100	58.003	ENSTSYG00000033183	PATZ1	100	59.029	Carlito_syrichta
ENSGAFG00000010053	patz1	100	57.856	ENSCCAG00000028772	PATZ1	100	59.029	Cebus_capucinus
ENSGAFG00000010053	patz1	100	57.856	ENSCATG00000006101	PATZ1	100	59.029	Cercocebus_atys
ENSGAFG00000010053	patz1	100	56.890	ENSCPBG00000011277	PATZ1	100	56.506	Chrysemys_picta_bellii
ENSGAFG00000010053	patz1	100	57.856	ENSCANG00000024972	PATZ1	100	59.029	Colobus_angolensis_palliatus
ENSGAFG00000010053	patz1	100	56.241	ENSCGRG00001004071	Patz1	100	57.558	Cricetulus_griseus_chok1gshd
ENSGAFG00000010053	patz1	93	56.358	ENSCGRG00000004814	Patz1	100	58.174	Cricetulus_griseus_crigri
ENSGAFG00000010053	patz1	100	74.779	ENSCSEG00000001385	patz1	100	74.487	Cynoglossus_semilaevis
ENSGAFG00000010053	patz1	100	91.091	ENSCVAG00000007684	patz1	100	91.244	Cyprinodon_variegatus
ENSGAFG00000010053	patz1	100	67.879	ENSDARG00000076584	patz1	100	69.182	Danio_rerio
ENSGAFG00000010053	patz1	92	53.231	ENSDNOG00000003183	PATZ1	100	53.077	Dasypus_novemcinctus
ENSGAFG00000010053	patz1	100	58.003	ENSDORG00000023834	Patz1	100	58.915	Dipodomys_ordii
ENSGAFG00000010053	patz1	100	57.856	ENSECAG00000025030	PATZ1	100	59.029	Equus_caballus
ENSGAFG00000010053	patz1	100	75.896	ENSELUG00000002333	patz1	100	75.595	Esox_lucius
ENSGAFG00000010053	patz1	100	57.856	ENSFCAG00000030253	PATZ1	100	58.721	Felis_catus
ENSGAFG00000010053	patz1	88	53.514	ENSFALG00000007450	PATZ1	100	53.994	Ficedula_albicollis
ENSGAFG00000010053	patz1	96	51.220	ENSFDAG00000005614	PATZ1	100	51.220	Fukomys_damarensis
ENSGAFG00000010053	patz1	100	90.630	ENSFHEG00000014755	patz1	99	92.000	Fundulus_heteroclitus
ENSGAFG00000010053	patz1	100	67.525	ENSGMOG00000001062	patz1	100	67.954	Gadus_morhua
ENSGAFG00000010053	patz1	100	53.215	ENSGALG00000006934	PATZ1	100	54.036	Gallus_gallus
ENSGAFG00000010053	patz1	87	55.408	ENSGAGG00000003214	PATZ1	100	56.944	Gopherus_agassizii
ENSGAFG00000010053	patz1	100	57.856	ENSGGOG00000017171	PATZ1	100	59.029	Gorilla_gorilla
ENSGAFG00000010053	patz1	99	79.394	ENSHCOG00000017644	patz1	93	77.744	Hippocampus_comes
ENSGAFG00000010053	patz1	100	67.742	ENSIPUG00000017653	patz1	99	67.742	Ictalurus_punctatus
ENSGAFG00000010053	patz1	100	57.709	ENSSTOG00000020707	PATZ1	100	58.835	Ictidomys_tridecemlineatus
ENSGAFG00000010053	patz1	100	57.205	ENSJJAG00000015259	Patz1	98	57.935	Jaculus_jaculus
ENSGAFG00000010053	patz1	100	79.613	ENSKMAG00000008157	patz1	100	88.785	Kryptolebias_marmoratus
ENSGAFG00000010053	patz1	100	55.493	ENSLAFG00000002317	PATZ1	100	55.352	Loxodonta_africana
ENSGAFG00000010053	patz1	100	57.856	ENSMFAG00000040968	PATZ1	100	59.029	Macaca_fascicularis
ENSGAFG00000010053	patz1	100	57.856	ENSMNEG00000037588	PATZ1	100	59.029	Macaca_nemestrina
ENSGAFG00000010053	patz1	100	57.856	ENSMLEG00000030938	PATZ1	100	59.029	Mandrillus_leucophaeus
ENSGAFG00000010053	patz1	100	86.391	ENSMAMG00000023652	patz1	100	86.391	Mastacembelus_armatus
ENSGAFG00000010053	patz1	88	50.725	ENSMGAG00000008439	PATZ1	100	51.208	Meleagris_gallopavo
ENSGAFG00000010053	patz1	100	57.856	ENSMAUG00000004129	Patz1	100	59.806	Mesocricetus_auratus
ENSGAFG00000010053	patz1	100	57.856	ENSMICG00000005430	PATZ1	100	58.915	Microcebus_murinus
ENSGAFG00000010053	patz1	100	57.856	ENSMOCG00000014488	Patz1	100	59.029	Microtus_ochrogaster
ENSGAFG00000010053	patz1	100	81.132	ENSMMOG00000021679	patz1	100	72.764	Mola_mola
ENSGAFG00000010053	patz1	100	84.404	ENSMALG00000021172	patz1	100	84.404	Monopterus_albus
ENSGAFG00000010053	patz1	100	58.003	MGP_CAROLIEiJ_G0016007	Patz1	100	59.029	Mus_caroli
ENSGAFG00000010053	patz1	100	58.003	ENSMUSG00000020453	Patz1	100	59.029	Mus_musculus
ENSGAFG00000010053	patz1	100	58.003	MGP_PahariEiJ_G0016884	Patz1	100	59.029	Mus_pahari
ENSGAFG00000010053	patz1	100	58.003	MGP_SPRETEiJ_G0016846	Patz1	100	59.029	Mus_spretus
ENSGAFG00000010053	patz1	100	57.856	ENSMLUG00000009942	PATZ1	100	58.721	Myotis_lucifugus
ENSGAFG00000010053	patz1	100	57.709	ENSNGAG00000010268	Patz1	100	58.835	Nannospalax_galili
ENSGAFG00000010053	patz1	100	82.828	ENSNBRG00000016032	patz1	100	82.828	Neolamprologus_brichardi
ENSGAFG00000010053	patz1	74	63.312	ENSMEUG00000016293	PATZ1	100	52.834	Notamacropus_eugenii
ENSGAFG00000010053	patz1	100	57.562	ENSODEG00000003589	PATZ1	100	58.527	Octodon_degus
ENSGAFG00000010053	patz1	100	87.786	ENSONIG00000004248	patz1	100	87.786	Oreochromis_niloticus
ENSGAFG00000010053	patz1	100	57.774	ENSOANG00000014654	PATZ1	100	55.417	Ornithorhynchus_anatinus
ENSGAFG00000010053	patz1	100	84.356	ENSORLG00020010937	patz1	100	83.589	Oryzias_latipes_hni
ENSGAFG00000010053	patz1	100	84.793	ENSORLG00015007396	patz1	100	84.025	Oryzias_latipes_hsok
ENSGAFG00000010053	patz1	100	86.133	ENSOMEG00000006636	patz1	100	85.208	Oryzias_melastigma
ENSGAFG00000010053	patz1	100	54.495	ENSOGAG00000027905	PATZ1	100	54.357	Otolemur_garnettii
ENSGAFG00000010053	patz1	100	57.856	ENSPPAG00000033227	PATZ1	100	59.029	Pan_paniscus
ENSGAFG00000010053	patz1	100	57.856	ENSPPRG00000001573	PATZ1	100	58.721	Panthera_pardus
ENSGAFG00000010053	patz1	88	53.933	ENSPTIG00000007937	PATZ1	91	53.748	Panthera_tigris_altaica
ENSGAFG00000010053	patz1	100	57.856	ENSPTRG00000014268	PATZ1	100	59.029	Pan_troglodytes
ENSGAFG00000010053	patz1	100	57.856	ENSPANG00000006821	PATZ1	98	59.029	Papio_anubis
ENSGAFG00000010053	patz1	100	70.233	ENSPKIG00000019584	patz1	100	70.039	Paramormyrops_kingsleyae
ENSGAFG00000010053	patz1	70	72.768	ENSPSIG00000011562	-	100	72.321	Pelodiscus_sinensis
ENSGAFG00000010053	patz1	73	56.728	ENSPSIG00000016553	-	92	56.501	Pelodiscus_sinensis
ENSGAFG00000010053	patz1	100	75.000	ENSPMGG00000010196	patz1	100	74.194	Periophthalmus_magnuspinnatus
ENSGAFG00000010053	patz1	100	58.003	ENSPEMG00000005321	Patz1	100	59.029	Peromyscus_maniculatus_bairdii
ENSGAFG00000010053	patz1	100	98.154	ENSPLAG00000010425	patz1	100	98.154	Poecilia_latipinna
ENSGAFG00000010053	patz1	100	98.305	ENSPMEG00000000255	patz1	100	98.305	Poecilia_mexicana
ENSGAFG00000010053	patz1	100	92.587	ENSPREG00000002440	patz1	100	92.587	Poecilia_reticulata
ENSGAFG00000010053	patz1	100	54.357	ENSPPYG00000011732	PATZ1	100	54.219	Pongo_abelii
ENSGAFG00000010053	patz1	100	57.856	ENSPCOG00000019729	PATZ1	100	58.915	Propithecus_coquereli
ENSGAFG00000010053	patz1	100	54.357	ENSPVAG00000001749	PATZ1	100	54.219	Pteropus_vampyrus
ENSGAFG00000010053	patz1	100	87.768	ENSPNYG00000013542	patz1	100	87.768	Pundamilia_nyererei
ENSGAFG00000010053	patz1	87	59.177	ENSPNAG00000017222	patz1	100	59.177	Pygocentrus_nattereri
ENSGAFG00000010053	patz1	100	57.856	ENSRBIG00000044231	PATZ1	100	59.029	Rhinopithecus_bieti
ENSGAFG00000010053	patz1	100	57.856	ENSRROG00000037155	PATZ1	100	59.029	Rhinopithecus_roxellana
ENSGAFG00000010053	patz1	100	57.856	ENSSBOG00000003894	PATZ1	100	59.029	Saimiri_boliviensis_boliviensis
ENSGAFG00000010053	patz1	84	96.795	ENSSFOG00015013244	patz1	78	96.795	Scleropages_formosus
ENSGAFG00000010053	patz1	99	54.793	ENSSPUG00000015298	PATZ1	97	56.203	Sphenodon_punctatus
ENSGAFG00000010053	patz1	87	57.812	ENSSSCG00000010027	PATZ1	100	59.124	Sus_scrofa
ENSGAFG00000010053	patz1	100	78.429	ENSTRUG00000015366	patz1	100	78.000	Takifugu_rubripes
ENSGAFG00000010053	patz1	100	54.219	ENSTTRG00000010279	PATZ1	100	54.080	Tursiops_truncatus
ENSGAFG00000010053	patz1	100	57.856	ENSUAMG00000015014	PATZ1	100	58.721	Ursus_americanus
ENSGAFG00000010053	patz1	100	53.067	ENSXETG00000004190	patz1	100	54.143	Xenopus_tropicalis
ENSGAFG00000010053	patz1	100	98.767	ENSXMAG00000015531	patz1	100	98.767	Xiphophorus_maculatus