EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010107 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6922 bases
Position: chrNHOQ01002390.1:13815098-13822019
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000014962	TruB_N	PF01509.18	3.1e-26	1	1
ENSGAFP00000014970	TruB_N	PF01509.18	4.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015118	-	3406	-	ENSGAFP00000014970	347 (aa)	-	-
ENSGAFT00000015110	-	5409	-	ENSGAFP00000014962	335 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010107	trub2	56	31.217	ENSGAFG00000009193	trub1	68	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010107	trub2	87	53.925	ENSG00000167112	TRUB2	84	56.475	Homo_sapiens
ENSGAFG00000010107	trub2	50	70.857	ENSAPOG00000018216	-	85	70.225	Acanthochromis_polyacanthus
ENSGAFG00000010107	trub2	75	74.556	ENSAPOG00000018284	-	97	71.910	Acanthochromis_polyacanthus
ENSGAFG00000010107	trub2	73	75.410	ENSAPOG00000015733	trub2	91	73.518	Acanthochromis_polyacanthus
ENSGAFG00000010107	trub2	88	55.034	ENSAMEG00000015395	TRUB2	85	57.394	Ailuropoda_melanoleuca
ENSGAFG00000010107	trub2	97	71.472	ENSACIG00000016500	trub2	99	71.472	Amphilophus_citrinellus
ENSGAFG00000010107	trub2	99	72.455	ENSAOCG00000002330	trub2	98	72.619	Amphiprion_ocellaris
ENSGAFG00000010107	trub2	99	72.754	ENSAPEG00000013177	trub2	98	72.917	Amphiprion_percula
ENSGAFG00000010107	trub2	89	72.575	ENSATEG00000011371	trub2	91	74.653	Anabas_testudineus
ENSGAFG00000010107	trub2	91	49.346	ENSAPLG00000009254	TRUB2	93	51.568	Anas_platyrhynchos
ENSGAFG00000010107	trub2	92	51.466	ENSACAG00000007331	TRUB2	85	53.737	Anolis_carolinensis
ENSGAFG00000010107	trub2	87	54.266	ENSANAG00000036234	TRUB2	90	56.429	Aotus_nancymaae
ENSGAFG00000010107	trub2	97	71.472	ENSACLG00000010793	trub2	99	70.552	Astatotilapia_calliptera
ENSGAFG00000010107	trub2	97	57.407	ENSAMXG00000031679	trub2	82	62.847	Astyanax_mexicanus
ENSGAFG00000010107	trub2	87	53.584	ENSCJAG00000020009	TRUB2	84	56.115	Callithrix_jacchus
ENSGAFG00000010107	trub2	87	53.767	ENSCAFG00000020068	TRUB2	84	56.115	Canis_familiaris
ENSGAFG00000010107	trub2	51	54.070	ENSCAFG00020017325	-	96	54.070	Canis_lupus_dingo
ENSGAFG00000010107	trub2	87	53.584	ENSCHIG00000021160	TRUB2	84	55.914	Capra_hircus
ENSGAFG00000010107	trub2	83	57.447	ENSTSYG00000034163	TRUB2	84	57.447	Carlito_syrichta
ENSGAFG00000010107	trub2	76	53.755	ENSCAPG00000000223	TRUB2	89	50.000	Cavia_aperea
ENSGAFG00000010107	trub2	84	55.477	ENSCPOG00000013535	TRUB2	87	53.529	Cavia_porcellus
ENSGAFG00000010107	trub2	88	50.338	ENSCCAG00000028463	-	85	52.669	Cebus_capucinus
ENSGAFG00000010107	trub2	86	55.208	ENSCCAG00000026531	-	87	55.208	Cebus_capucinus
ENSGAFG00000010107	trub2	87	54.795	ENSCATG00000038234	TRUB2	84	57.194	Cercocebus_atys
ENSGAFG00000010107	trub2	84	55.124	ENSCLAG00000001702	TRUB2	87	54.118	Chinchilla_lanigera
ENSGAFG00000010107	trub2	87	52.027	ENSCSAG00000014117	TRUB2	84	54.255	Chlorocebus_sabaeus
ENSGAFG00000010107	trub2	87	53.082	ENSCHOG00000001555	TRUB2	84	55.396	Choloepus_hoffmanni
ENSGAFG00000010107	trub2	88	54.915	ENSCPBG00000025186	TRUB2	86	54.915	Chrysemys_picta_bellii
ENSGAFG00000010107	trub2	79	34.586	ENSCSAVG00000003930	-	81	34.586	Ciona_savignyi
ENSGAFG00000010107	trub2	89	48.837	ENSCANG00000016135	TRUB2	88	48.814	Colobus_angolensis_palliatus
ENSGAFG00000010107	trub2	87	51.370	ENSCGRG00001024441	Trub2	91	49.412	Cricetulus_griseus_chok1gshd
ENSGAFG00000010107	trub2	87	51.370	ENSCGRG00000005633	Trub2	84	53.237	Cricetulus_griseus_crigri
ENSGAFG00000010107	trub2	97	60.856	ENSCSEG00000001331	trub2	86	65.972	Cynoglossus_semilaevis
ENSGAFG00000010107	trub2	99	76.205	ENSCVAG00000009901	trub2	99	75.904	Cyprinodon_variegatus
ENSGAFG00000010107	trub2	99	55.891	ENSDARG00000028379	trub2	82	61.672	Danio_rerio
ENSGAFG00000010107	trub2	79	39.552	ENSDNOG00000043967	-	81	38.148	Dasypus_novemcinctus
ENSGAFG00000010107	trub2	87	54.082	ENSDNOG00000045679	-	83	56.272	Dasypus_novemcinctus
ENSGAFG00000010107	trub2	87	53.767	ENSDORG00000016222	Trub2	87	56.115	Dipodomys_ordii
ENSGAFG00000010107	trub2	85	32.069	FBgn0033060	CG7849	90	32.180	Drosophila_melanogaster
ENSGAFG00000010107	trub2	89	51.342	ENSETEG00000009114	TRUB2	92	51.342	Echinops_telfairi
ENSGAFG00000010107	trub2	74	44.848	ENSEBUG00000015723	trub2	91	44.848	Eptatretus_burgeri
ENSGAFG00000010107	trub2	87	54.054	ENSEASG00005016819	TRUB2	84	56.383	Equus_asinus_asinus
ENSGAFG00000010107	trub2	87	54.110	ENSECAG00000023520	TRUB2	84	56.475	Equus_caballus
ENSGAFG00000010107	trub2	93	50.799	ENSEEUG00000008908	TRUB2	95	50.799	Erinaceus_europaeus
ENSGAFG00000010107	trub2	90	65.506	ENSELUG00000002376	trub2	94	66.887	Esox_lucius
ENSGAFG00000010107	trub2	87	55.254	ENSFCAG00000005839	TRUB2	86	57.857	Felis_catus
ENSGAFG00000010107	trub2	89	48.525	ENSFALG00000001364	TRUB2	98	49.180	Ficedula_albicollis
ENSGAFG00000010107	trub2	84	55.124	ENSFDAG00000021374	TRUB2	95	50.270	Fukomys_damarensis
ENSGAFG00000010107	trub2	100	71.131	ENSFHEG00000014655	trub2	100	70.833	Fundulus_heteroclitus
ENSGAFG00000010107	trub2	88	57.770	ENSGMOG00000000981	trub2	96	58.681	Gadus_morhua
ENSGAFG00000010107	trub2	82	55.109	ENSGALG00000004920	TRUB2	67	55.109	Gallus_gallus
ENSGAFG00000010107	trub2	96	69.782	ENSGACG00000001476	trub2	87	73.958	Gasterosteus_aculeatus
ENSGAFG00000010107	trub2	87	55.137	ENSGAGG00000022872	TRUB2	86	55.137	Gopherus_agassizii
ENSGAFG00000010107	trub2	83	56.115	ENSGGOG00000014780	TRUB2	84	56.115	Gorilla_gorilla
ENSGAFG00000010107	trub2	97	72.086	ENSHBUG00000022384	trub2	99	71.166	Haplochromis_burtoni
ENSGAFG00000010107	trub2	84	54.064	ENSHGLG00000016715	TRUB2	84	55.036	Heterocephalus_glaber_female
ENSGAFG00000010107	trub2	84	54.064	ENSHGLG00100016548	TRUB2	84	55.036	Heterocephalus_glaber_male
ENSGAFG00000010107	trub2	93	70.382	ENSHCOG00000017748	trub2	88	73.958	Hippocampus_comes
ENSGAFG00000010107	trub2	89	60.333	ENSIPUG00000017725	hdhd3	50	62.369	Ictalurus_punctatus
ENSGAFG00000010107	trub2	84	54.770	ENSSTOG00000022617	-	84	55.755	Ictidomys_tridecemlineatus
ENSGAFG00000010107	trub2	83	55.755	ENSSTOG00000008024	-	84	55.755	Ictidomys_tridecemlineatus
ENSGAFG00000010107	trub2	90	46.732	ENSJJAG00000019181	Trub2	82	50.000	Jaculus_jaculus
ENSGAFG00000010107	trub2	97	73.089	ENSKMAG00000007861	trub2	98	72.783	Kryptolebias_marmoratus
ENSGAFG00000010107	trub2	95	69.497	ENSLBEG00000000907	trub2	96	68.405	Labrus_bergylta
ENSGAFG00000010107	trub2	99	49.702	ENSLACG00000001515	TRUB2	85	54.167	Latimeria_chalumnae
ENSGAFG00000010107	trub2	86	61.246	ENSLOCG00000000885	trub2	95	61.458	Lepisosteus_oculatus
ENSGAFG00000010107	trub2	87	53.425	ENSLAFG00000002174	TRUB2	91	55.755	Loxodonta_africana
ENSGAFG00000010107	trub2	87	54.452	ENSMFAG00000000881	TRUB2	84	56.835	Macaca_fascicularis
ENSGAFG00000010107	trub2	87	54.452	ENSMMUG00000014146	TRUB2	84	56.835	Macaca_mulatta
ENSGAFG00000010107	trub2	87	54.452	ENSMNEG00000011189	TRUB2	84	56.835	Macaca_nemestrina
ENSGAFG00000010107	trub2	87	54.452	ENSMLEG00000037270	TRUB2	84	56.835	Mandrillus_leucophaeus
ENSGAFG00000010107	trub2	88	72.635	ENSMAMG00000023643	trub2	95	73.611	Mastacembelus_armatus
ENSGAFG00000010107	trub2	97	71.779	ENSMZEG00005016018	trub2	99	70.859	Maylandia_zebra
ENSGAFG00000010107	trub2	55	58.470	ENSMGAG00000003894	TRUB2	92	58.470	Meleagris_gallopavo
ENSGAFG00000010107	trub2	87	51.712	ENSMAUG00000010403	Trub2	95	47.027	Mesocricetus_auratus
ENSGAFG00000010107	trub2	87	53.925	ENSMICG00000047032	TRUB2	84	56.475	Microcebus_murinus
ENSGAFG00000010107	trub2	84	53.004	ENSMOCG00000014291	Trub2	91	53.957	Microtus_ochrogaster
ENSGAFG00000010107	trub2	93	69.427	ENSMMOG00000021674	trub2	89	72.917	Mola_mola
ENSGAFG00000010107	trub2	85	54.007	ENSMODG00000005940	TRUB2	94	54.610	Monodelphis_domestica
ENSGAFG00000010107	trub2	97	73.030	ENSMALG00000021231	trub2	98	72.727	Monopterus_albus
ENSGAFG00000010107	trub2	88	51.186	MGP_CAROLIEiJ_G0023368	Trub2	96	47.059	Mus_caroli
ENSGAFG00000010107	trub2	88	51.186	ENSMUSG00000039826	Trub2	95	47.568	Mus_musculus
ENSGAFG00000010107	trub2	88	51.525	MGP_PahariEiJ_G0024826	Trub2	87	51.176	Mus_pahari
ENSGAFG00000010107	trub2	88	51.525	MGP_SPRETEiJ_G0024286	Trub2	95	48.108	Mus_spretus
ENSGAFG00000010107	trub2	90	53.770	ENSMPUG00000013206	TRUB2	83	53.770	Mustela_putorius_furo
ENSGAFG00000010107	trub2	83	56.115	ENSMLUG00000005256	TRUB2	83	56.115	Myotis_lucifugus
ENSGAFG00000010107	trub2	87	51.370	ENSNGAG00000018679	Trub2	84	53.237	Nannospalax_galili
ENSGAFG00000010107	trub2	97	71.472	ENSNBRG00000016294	trub2	99	70.859	Neolamprologus_brichardi
ENSGAFG00000010107	trub2	87	53.925	ENSNLEG00000017556	TRUB2	84	56.475	Nomascus_leucogenys
ENSGAFG00000010107	trub2	84	54.255	ENSMEUG00000000484	TRUB2	89	54.874	Notamacropus_eugenii
ENSGAFG00000010107	trub2	84	50.530	ENSOPRG00000001981	TRUB2	84	51.625	Ochotona_princeps
ENSGAFG00000010107	trub2	93	51.899	ENSODEG00000017292	TRUB2	85	55.755	Octodon_degus
ENSGAFG00000010107	trub2	97	72.086	ENSONIG00000004230	trub2	99	72.086	Oreochromis_niloticus
ENSGAFG00000010107	trub2	56	51.042	ENSOANG00000029023	-	83	51.042	Ornithorhynchus_anatinus
ENSGAFG00000010107	trub2	84	54.770	ENSOCUG00000026296	TRUB2	76	55.755	Oryctolagus_cuniculus
ENSGAFG00000010107	trub2	96	70.679	ENSORLG00000020011	trub2	95	70.679	Oryzias_latipes
ENSGAFG00000010107	trub2	94	71.835	ENSORLG00020011028	trub2	90	71.835	Oryzias_latipes_hni
ENSGAFG00000010107	trub2	94	72.152	ENSORLG00015007494	trub2	94	72.468	Oryzias_latipes_hsok
ENSGAFG00000010107	trub2	97	70.859	ENSOMEG00000006702	trub2	99	70.859	Oryzias_melastigma
ENSGAFG00000010107	trub2	87	53.767	ENSOARG00000010579	-	84	56.115	Ovis_aries
ENSGAFG00000010107	trub2	60	58.000	ENSOARG00000003785	-	81	57.561	Ovis_aries
ENSGAFG00000010107	trub2	87	54.266	ENSPPAG00000043146	TRUB2	84	56.835	Pan_paniscus
ENSGAFG00000010107	trub2	87	55.254	ENSPPRG00000006307	TRUB2	86	57.857	Panthera_pardus
ENSGAFG00000010107	trub2	87	55.593	ENSPTIG00000012366	TRUB2	86	58.214	Panthera_tigris_altaica
ENSGAFG00000010107	trub2	87	53.925	ENSPTRG00000021423	TRUB2	84	56.475	Pan_troglodytes
ENSGAFG00000010107	trub2	87	53.925	ENSPTRG00000052151	-	84	56.475	Pan_troglodytes
ENSGAFG00000010107	trub2	87	54.452	ENSPANG00000025856	TRUB2	84	56.835	Papio_anubis
ENSGAFG00000010107	trub2	91	63.158	ENSPKIG00000019769	trub2	94	65.854	Paramormyrops_kingsleyae
ENSGAFG00000010107	trub2	87	50.515	ENSPSIG00000015701	TRUB2	92	51.986	Pelodiscus_sinensis
ENSGAFG00000010107	trub2	94	63.291	ENSPMGG00000010206	trub2	90	66.783	Periophthalmus_magnuspinnatus
ENSGAFG00000010107	trub2	87	51.877	ENSPEMG00000017893	Trub2	91	50.292	Peromyscus_maniculatus_bairdii
ENSGAFG00000010107	trub2	84	55.319	ENSPCIG00000026731	TRUB2	89	55.957	Phascolarctos_cinereus
ENSGAFG00000010107	trub2	97	90.578	ENSPFOG00000018018	trub2	87	90.578	Poecilia_formosa
ENSGAFG00000010107	trub2	97	91.185	ENSPLAG00000010484	trub2	94	91.185	Poecilia_latipinna
ENSGAFG00000010107	trub2	100	92.012	ENSPMEG00000012913	trub2	100	90.828	Poecilia_mexicana
ENSGAFG00000010107	trub2	100	91.716	ENSPREG00000002549	trub2	100	91.716	Poecilia_reticulata
ENSGAFG00000010107	trub2	87	53.584	ENSPPYG00000019650	TRUB2	86	55.714	Pongo_abelii
ENSGAFG00000010107	trub2	87	54.452	ENSPCAG00000015068	TRUB2	85	56.835	Procavia_capensis
ENSGAFG00000010107	trub2	87	53.425	ENSPCOG00000017100	TRUB2	84	55.755	Propithecus_coquereli
ENSGAFG00000010107	trub2	83	52.347	ENSPVAG00000001224	TRUB2	93	52.347	Pteropus_vampyrus
ENSGAFG00000010107	trub2	97	72.086	ENSPNYG00000013666	trub2	99	71.166	Pundamilia_nyererei
ENSGAFG00000010107	trub2	98	56.757	ENSPNAG00000017292	trub2	82	62.718	Pygocentrus_nattereri
ENSGAFG00000010107	trub2	87	51.361	ENSRNOG00000043189	Trub2	86	53.763	Rattus_norvegicus
ENSGAFG00000010107	trub2	87	50.000	ENSRBIG00000006965	TRUB2	82	52.158	Rhinopithecus_bieti
ENSGAFG00000010107	trub2	87	55.137	ENSRROG00000042928	TRUB2	84	57.554	Rhinopithecus_roxellana
ENSGAFG00000010107	trub2	83	56.115	ENSSBOG00000022439	TRUB2	84	56.115	Saimiri_boliviensis_boliviensis
ENSGAFG00000010107	trub2	86	63.889	ENSSFOG00015013391	trub2	92	64.111	Scleropages_formosus
ENSGAFG00000010107	trub2	91	72.222	ENSSMAG00000020820	trub2	98	67.372	Scophthalmus_maximus
ENSGAFG00000010107	trub2	87	75.517	ENSSDUG00000016928	trub2	97	70.859	Seriola_dumerili
ENSGAFG00000010107	trub2	97	69.018	ENSSLDG00000024701	trub2	97	69.939	Seriola_lalandi_dorsalis
ENSGAFG00000010107	trub2	94	48.254	ENSSPUG00000015515	TRUB2	94	48.254	Sphenodon_punctatus
ENSGAFG00000010107	trub2	99	71.856	ENSSPAG00000017865	trub2	100	70.571	Stegastes_partitus
ENSGAFG00000010107	trub2	83	55.396	ENSSSCG00000005645	TRUB2	84	54.217	Sus_scrofa
ENSGAFG00000010107	trub2	79	53.992	ENSTGUG00000003704	TRUB2	94	56.048	Taeniopygia_guttata
ENSGAFG00000010107	trub2	90	71.854	ENSTRUG00000015499	trub2	88	72.569	Takifugu_rubripes
ENSGAFG00000010107	trub2	87	70.000	ENSTNIG00000014721	trub2	98	70.383	Tetraodon_nigroviridis
ENSGAFG00000010107	trub2	57	51.562	ENSTBEG00000000586	TRUB2	79	55.056	Tupaia_belangeri
ENSGAFG00000010107	trub2	84	53.004	ENSTTRG00000016486	TRUB2	84	53.957	Tursiops_truncatus
ENSGAFG00000010107	trub2	88	54.362	ENSUAMG00000020276	TRUB2	83	56.690	Ursus_americanus
ENSGAFG00000010107	trub2	88	54.698	ENSUMAG00000022051	TRUB2	83	57.042	Ursus_maritimus
ENSGAFG00000010107	trub2	87	41.781	ENSVPAG00000005793	TRUB2	87	43.525	Vicugna_pacos
ENSGAFG00000010107	trub2	87	53.767	ENSVVUG00000013451	TRUB2	79	56.115	Vulpes_vulpes
ENSGAFG00000010107	trub2	87	52.881	ENSXETG00000003973	trub2	88	53.793	Xenopus_tropicalis
ENSGAFG00000010107	trub2	100	93.452	ENSXCOG00000008759	trub2	100	93.155	Xiphophorus_couchianus
ENSGAFG00000010107	trub2	100	94.048	ENSXMAG00000015478	trub2	100	93.750	Xiphophorus_maculatus