EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000010153 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5235 bases
Position: chrNHOQ01001709.1:82406-87640
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015034	RNA_pol_A_bac	PF01000.26	4.7e-32	1	1
ENSGAFP00000015034	RNA_pol_L	PF01193.24	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015182	-	1280	-	ENSGAFP00000015034	351 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010153	polr1c	100	72.080	ENSG00000171453	POLR1C	100	73.077	Homo_sapiens
ENSGAFG00000010153	polr1c	100	86.895	ENSAPOG00000024356	polr1c	100	86.895	Acanthochromis_polyacanthus
ENSGAFG00000010153	polr1c	99	72.493	ENSAMEG00000012205	POLR1C	99	72.206	Ailuropoda_melanoleuca
ENSGAFG00000010153	polr1c	94	77.946	ENSACIG00000016268	polr1c	91	77.946	Amphilophus_citrinellus
ENSGAFG00000010153	polr1c	100	86.895	ENSAOCG00000011687	polr1c	97	86.895	Amphiprion_ocellaris
ENSGAFG00000010153	polr1c	100	87.464	ENSAPEG00000002433	polr1c	100	87.464	Amphiprion_percula
ENSGAFG00000010153	polr1c	99	90.831	ENSATEG00000005985	polr1c	99	90.831	Anabas_testudineus
ENSGAFG00000010153	polr1c	87	71.053	ENSAPLG00000002908	POLR1C	100	70.724	Anas_platyrhynchos
ENSGAFG00000010153	polr1c	90	74.286	ENSACAG00000009764	POLR1C	89	73.968	Anolis_carolinensis
ENSGAFG00000010153	polr1c	100	72.365	ENSANAG00000025805	POLR1C	99	72.080	Aotus_nancymaae
ENSGAFG00000010153	polr1c	100	89.459	ENSACLG00000006573	polr1c	100	89.459	Astatotilapia_calliptera
ENSGAFG00000010153	polr1c	56	30.612	ENSACLG00000004854	polr2c	78	30.612	Astatotilapia_calliptera
ENSGAFG00000010153	polr1c	100	80.627	ENSAMXG00000012062	polr1c	99	80.342	Astyanax_mexicanus
ENSGAFG00000010153	polr1c	100	72.365	ENSBTAG00000018969	POLR1C	100	72.365	Bos_taurus
ENSGAFG00000010153	polr1c	56	30.918	WBGene00007971	rpb-3	67	30.918	Caenorhabditis_elegans
ENSGAFG00000010153	polr1c	92	46.154	WBGene00019275	rpac-40	92	45.562	Caenorhabditis_elegans
ENSGAFG00000010153	polr1c	100	71.510	ENSCJAG00000005594	POLR1C	100	71.225	Callithrix_jacchus
ENSGAFG00000010153	polr1c	100	72.080	ENSCAFG00000001872	POLR1C	100	71.795	Canis_familiaris
ENSGAFG00000010153	polr1c	60	30.986	ENSCAFG00020007660	POLR2C	60	30.986	Canis_lupus_dingo
ENSGAFG00000010153	polr1c	100	72.080	ENSCAFG00020012018	POLR1C	100	71.795	Canis_lupus_dingo
ENSGAFG00000010153	polr1c	100	72.365	ENSCHIG00000004352	POLR1C	100	72.080	Capra_hircus
ENSGAFG00000010153	polr1c	100	72.365	ENSTSYG00000011921	POLR1C	100	72.080	Carlito_syrichta
ENSGAFG00000010153	polr1c	86	73.927	ENSCAPG00000015364	POLR1C	88	73.597	Cavia_aperea
ENSGAFG00000010153	polr1c	100	73.219	ENSCPOG00000038098	POLR1C	100	72.934	Cavia_porcellus
ENSGAFG00000010153	polr1c	100	72.080	ENSCCAG00000020169	POLR1C	100	71.795	Cebus_capucinus
ENSGAFG00000010153	polr1c	100	71.795	ENSCATG00000044045	POLR1C	100	71.795	Cercocebus_atys
ENSGAFG00000010153	polr1c	60	30.986	ENSCLAG00000013676	POLR2C	52	30.986	Chinchilla_lanigera
ENSGAFG00000010153	polr1c	100	73.504	ENSCLAG00000009266	POLR1C	100	73.219	Chinchilla_lanigera
ENSGAFG00000010153	polr1c	100	70.940	ENSCSAG00000011913	POLR1C	100	70.940	Chlorocebus_sabaeus
ENSGAFG00000010153	polr1c	60	67.925	ENSCHOG00000006601	POLR1C	100	67.925	Choloepus_hoffmanni
ENSGAFG00000010153	polr1c	99	74.212	ENSCPBG00000025203	POLR1C	99	73.926	Chrysemys_picta_bellii
ENSGAFG00000010153	polr1c	97	54.971	ENSCING00000003563	-	97	54.971	Ciona_intestinalis
ENSGAFG00000010153	polr1c	100	71.795	ENSCANG00000043167	POLR1C	100	71.510	Colobus_angolensis_palliatus
ENSGAFG00000010153	polr1c	100	71.510	ENSCGRG00001017533	Polr1c	100	71.225	Cricetulus_griseus_chok1gshd
ENSGAFG00000010153	polr1c	86	71.947	ENSCGRG00000013225	Polr1c	100	71.617	Cricetulus_griseus_crigri
ENSGAFG00000010153	polr1c	100	84.330	ENSCSEG00000018097	polr1c	100	84.330	Cynoglossus_semilaevis
ENSGAFG00000010153	polr1c	56	30.102	ENSCVAG00000017931	polr2c	74	30.102	Cyprinodon_variegatus
ENSGAFG00000010153	polr1c	60	92.925	ENSCVAG00000005684	polr1c	85	92.925	Cyprinodon_variegatus
ENSGAFG00000010153	polr1c	100	79.772	ENSDARG00000039400	polr1c	96	79.487	Danio_rerio
ENSGAFG00000010153	polr1c	100	71.510	ENSDNOG00000042693	POLR1C	100	71.225	Dasypus_novemcinctus
ENSGAFG00000010153	polr1c	100	72.365	ENSDORG00000000429	Polr1c	100	72.080	Dipodomys_ordii
ENSGAFG00000010153	polr1c	90	51.104	FBgn0031657	CG3756	93	50.789	Drosophila_melanogaster
ENSGAFG00000010153	polr1c	99	68.571	ENSETEG00000010807	POLR1C	99	68.571	Echinops_telfairi
ENSGAFG00000010153	polr1c	97	67.353	ENSEBUG00000013725	polr1c	98	66.570	Eptatretus_burgeri
ENSGAFG00000010153	polr1c	100	72.080	ENSEASG00005003338	POLR1C	100	71.795	Equus_asinus_asinus
ENSGAFG00000010153	polr1c	100	72.080	ENSECAG00000023516	POLR1C	98	71.795	Equus_caballus
ENSGAFG00000010153	polr1c	99	72.779	ENSEEUG00000005471	POLR1C	99	72.493	Erinaceus_europaeus
ENSGAFG00000010153	polr1c	100	79.772	ENSELUG00000013027	polr1c	100	79.487	Esox_lucius
ENSGAFG00000010153	polr1c	100	72.080	ENSFCAG00000009735	POLR1C	100	71.795	Felis_catus
ENSGAFG00000010153	polr1c	93	71.254	ENSFALG00000012111	POLR1C	100	70.948	Ficedula_albicollis
ENSGAFG00000010153	polr1c	100	73.219	ENSFDAG00000008428	POLR1C	100	72.934	Fukomys_damarensis
ENSGAFG00000010153	polr1c	100	80.057	ENSFHEG00000000262	polr1c	100	80.627	Fundulus_heteroclitus
ENSGAFG00000010153	polr1c	93	80.183	ENSGMOG00000013878	polr1c	100	79.573	Gadus_morhua
ENSGAFG00000010153	polr1c	100	72.650	ENSGALG00000010349	POLR1C	100	72.365	Gallus_gallus
ENSGAFG00000010153	polr1c	100	84.330	ENSGACG00000002453	polr1c	100	84.330	Gasterosteus_aculeatus
ENSGAFG00000010153	polr1c	99	73.699	ENSGAGG00000010640	POLR1C	99	73.410	Gopherus_agassizii
ENSGAFG00000010153	polr1c	100	72.080	ENSGGOG00000010903	POLR1C	100	71.795	Gorilla_gorilla
ENSGAFG00000010153	polr1c	100	78.917	ENSHBUG00000017816	polr1c	100	78.348	Haplochromis_burtoni
ENSGAFG00000010153	polr1c	56	30.612	ENSHBUG00000023040	polr2c	78	30.612	Haplochromis_burtoni
ENSGAFG00000010153	polr1c	100	72.365	ENSHGLG00000019441	POLR1C	100	72.080	Heterocephalus_glaber_female
ENSGAFG00000010153	polr1c	100	72.650	ENSHGLG00100005970	POLR1C	100	72.365	Heterocephalus_glaber_male
ENSGAFG00000010153	polr1c	99	80.516	ENSHCOG00000002179	polr1c	99	80.516	Hippocampus_comes
ENSGAFG00000010153	polr1c	99	80.802	ENSIPUG00000024464	polr1c	99	80.516	Ictalurus_punctatus
ENSGAFG00000010153	polr1c	100	72.365	ENSSTOG00000010631	POLR1C	100	72.080	Ictidomys_tridecemlineatus
ENSGAFG00000010153	polr1c	60	30.986	ENSSTOG00000015150	-	50	30.986	Ictidomys_tridecemlineatus
ENSGAFG00000010153	polr1c	100	72.365	ENSJJAG00000023110	Polr1c	100	72.080	Jaculus_jaculus
ENSGAFG00000010153	polr1c	100	91.453	ENSKMAG00000014305	polr1c	97	91.453	Kryptolebias_marmoratus
ENSGAFG00000010153	polr1c	100	87.749	ENSLBEG00000014925	polr1c	100	87.749	Labrus_bergylta
ENSGAFG00000010153	polr1c	95	59.226	ENSLACG00000012567	POLR1C	98	58.929	Latimeria_chalumnae
ENSGAFG00000010153	polr1c	100	78.348	ENSLOCG00000016710	polr1c	96	78.063	Lepisosteus_oculatus
ENSGAFG00000010153	polr1c	87	72.459	ENSLAFG00000026248	POLR1C	100	72.459	Loxodonta_africana
ENSGAFG00000010153	polr1c	60	30.986	ENSLAFG00000027230	POLR2C	74	30.986	Loxodonta_africana
ENSGAFG00000010153	polr1c	60	30.986	ENSMFAG00000016861	POLR2C	60	30.508	Macaca_fascicularis
ENSGAFG00000010153	polr1c	100	71.510	ENSMFAG00000046295	POLR1C	100	71.510	Macaca_fascicularis
ENSGAFG00000010153	polr1c	100	71.510	ENSMMUG00000015192	POLR1C	100	71.510	Macaca_mulatta
ENSGAFG00000010153	polr1c	60	30.986	ENSMMUG00000020474	POLR2C	60	30.508	Macaca_mulatta
ENSGAFG00000010153	polr1c	100	71.510	ENSMNEG00000028073	POLR1C	100	71.510	Macaca_nemestrina
ENSGAFG00000010153	polr1c	100	71.510	ENSMLEG00000034818	POLR1C	100	71.510	Mandrillus_leucophaeus
ENSGAFG00000010153	polr1c	100	89.174	ENSMAMG00000008700	polr1c	100	89.174	Mastacembelus_armatus
ENSGAFG00000010153	polr1c	100	89.174	ENSMZEG00005018545	polr1c	100	89.174	Maylandia_zebra
ENSGAFG00000010153	polr1c	84	67.797	ENSMGAG00000011020	POLR1C	100	67.458	Meleagris_gallopavo
ENSGAFG00000010153	polr1c	100	71.510	ENSMAUG00000014329	Polr1c	100	71.225	Mesocricetus_auratus
ENSGAFG00000010153	polr1c	100	70.940	ENSMICG00000005027	POLR1C	99	71.885	Microcebus_murinus
ENSGAFG00000010153	polr1c	60	31.280	ENSMOCG00000013652	Polr2c	73	31.280	Microtus_ochrogaster
ENSGAFG00000010153	polr1c	100	72.080	ENSMOCG00000017549	Polr1c	100	71.795	Microtus_ochrogaster
ENSGAFG00000010153	polr1c	100	68.946	ENSMMOG00000005380	polr1c	100	69.516	Mola_mola
ENSGAFG00000010153	polr1c	84	73.220	ENSMODG00000018964	POLR1C	100	73.220	Monodelphis_domestica
ENSGAFG00000010153	polr1c	100	74.074	ENSMALG00000011711	polr1c	100	74.644	Monopterus_albus
ENSGAFG00000010153	polr1c	100	62.963	MGP_CAROLIEiJ_G0021662	Polr1c	100	69.697	Mus_caroli
ENSGAFG00000010153	polr1c	100	71.795	ENSMUSG00000067148	Polr1c	99	75.728	Mus_musculus
ENSGAFG00000010153	polr1c	100	72.365	MGP_PahariEiJ_G0020654	Polr1c	99	76.699	Mus_pahari
ENSGAFG00000010153	polr1c	100	71.795	MGP_SPRETEiJ_G0022574	Polr1c	99	75.728	Mus_spretus
ENSGAFG00000010153	polr1c	100	72.365	ENSMPUG00000012916	POLR1C	91	72.080	Mustela_putorius_furo
ENSGAFG00000010153	polr1c	100	72.365	ENSMLUG00000017751	POLR1C	99	72.080	Myotis_lucifugus
ENSGAFG00000010153	polr1c	100	72.080	ENSNGAG00000023487	Polr1c	100	71.795	Nannospalax_galili
ENSGAFG00000010153	polr1c	100	89.174	ENSNBRG00000018742	polr1c	100	89.174	Neolamprologus_brichardi
ENSGAFG00000010153	polr1c	100	72.080	ENSNLEG00000004035	POLR1C	100	71.795	Nomascus_leucogenys
ENSGAFG00000010153	polr1c	99	61.605	ENSMEUG00000006778	POLR1C	99	61.605	Notamacropus_eugenii
ENSGAFG00000010153	polr1c	78	72.894	ENSOPRG00000000145	POLR1C	100	72.894	Ochotona_princeps
ENSGAFG00000010153	polr1c	62	69.406	ENSODEG00000017109	-	97	70.283	Octodon_degus
ENSGAFG00000010153	polr1c	100	73.219	ENSODEG00000015831	-	100	72.934	Octodon_degus
ENSGAFG00000010153	polr1c	100	89.744	ENSONIG00000013133	polr1c	98	89.744	Oreochromis_niloticus
ENSGAFG00000010153	polr1c	99	70.201	ENSOANG00000003043	POLR1C	99	69.914	Ornithorhynchus_anatinus
ENSGAFG00000010153	polr1c	100	71.225	ENSOCUG00000005504	POLR1C	99	70.940	Oryctolagus_cuniculus
ENSGAFG00000010153	polr1c	99	85.879	ENSORLG00000019743	polr1c	99	85.879	Oryzias_latipes
ENSGAFG00000010153	polr1c	77	66.304	ENSORLG00020005555	polr1c	81	66.304	Oryzias_latipes_hni
ENSGAFG00000010153	polr1c	99	86.455	ENSORLG00020006489	POLR1C	99	86.455	Oryzias_latipes_hni
ENSGAFG00000010153	polr1c	99	86.167	ENSORLG00015013322	polr1c	99	86.167	Oryzias_latipes_hsok
ENSGAFG00000010153	polr1c	99	86.127	ENSOMEG00000016527	polr1c	99	86.127	Oryzias_melastigma
ENSGAFG00000010153	polr1c	99	71.633	ENSOGAG00000016318	POLR1C	99	71.060	Otolemur_garnettii
ENSGAFG00000010153	polr1c	100	72.080	ENSOARG00000007503	POLR1C	100	72.080	Ovis_aries
ENSGAFG00000010153	polr1c	50	30.508	ENSPPAG00000042822	POLR2C	62	30.588	Pan_paniscus
ENSGAFG00000010153	polr1c	100	72.080	ENSPPAG00000043678	POLR1C	100	71.795	Pan_paniscus
ENSGAFG00000010153	polr1c	100	72.365	ENSPPRG00000009760	POLR1C	100	72.080	Panthera_pardus
ENSGAFG00000010153	polr1c	100	72.365	ENSPTIG00000014813	POLR1C	100	72.080	Panthera_tigris_altaica
ENSGAFG00000010153	polr1c	100	72.080	ENSPTRG00000018202	POLR1C	100	71.795	Pan_troglodytes
ENSGAFG00000010153	polr1c	60	30.986	ENSPTRG00000008157	POLR2C	60	30.508	Pan_troglodytes
ENSGAFG00000010153	polr1c	100	71.795	ENSPANG00000009025	POLR1C	99	71.795	Papio_anubis
ENSGAFG00000010153	polr1c	100	78.632	ENSPKIG00000009858	polr1c	100	78.348	Paramormyrops_kingsleyae
ENSGAFG00000010153	polr1c	99	73.352	ENSPSIG00000012580	POLR1C	94	73.066	Pelodiscus_sinensis
ENSGAFG00000010153	polr1c	100	70.655	ENSPMGG00000012121	polr1c	100	70.655	Periophthalmus_magnuspinnatus
ENSGAFG00000010153	polr1c	100	71.510	ENSPEMG00000006970	Polr1c	100	71.225	Peromyscus_maniculatus_bairdii
ENSGAFG00000010153	polr1c	56	34.653	ENSPMAG00000004827	polr2c	87	34.101	Petromyzon_marinus
ENSGAFG00000010153	polr1c	99	69.714	ENSPMAG00000005560	polr1c	99	69.429	Petromyzon_marinus
ENSGAFG00000010153	polr1c	99	73.639	ENSPCIG00000028137	POLR1C	98	73.639	Phascolarctos_cinereus
ENSGAFG00000010153	polr1c	100	98.006	ENSPFOG00000014357	polr1c	98	98.006	Poecilia_formosa
ENSGAFG00000010153	polr1c	100	98.006	ENSPFOG00000014342	POLR1C	100	98.006	Poecilia_formosa
ENSGAFG00000010153	polr1c	63	97.748	ENSPLAG00000004111	polr1c	93	97.748	Poecilia_latipinna
ENSGAFG00000010153	polr1c	100	98.006	ENSPMEG00000011877	-	100	98.006	Poecilia_mexicana
ENSGAFG00000010153	polr1c	100	98.006	ENSPMEG00000008420	polr1c	100	98.006	Poecilia_mexicana
ENSGAFG00000010153	polr1c	100	96.296	ENSPREG00000007985	polr1c	100	96.296	Poecilia_reticulata
ENSGAFG00000010153	polr1c	100	71.795	ENSPPYG00000016645	POLR1C	100	71.510	Pongo_abelii
ENSGAFG00000010153	polr1c	100	71.225	ENSPCOG00000024628	POLR1C	100	70.940	Propithecus_coquereli
ENSGAFG00000010153	polr1c	100	66.952	ENSPVAG00000005689	POLR1C	100	66.952	Pteropus_vampyrus
ENSGAFG00000010153	polr1c	100	89.174	ENSPNYG00000003620	polr1c	100	89.174	Pundamilia_nyererei
ENSGAFG00000010153	polr1c	100	82.051	ENSPNAG00000008443	polr1c	100	81.766	Pygocentrus_nattereri
ENSGAFG00000010153	polr1c	100	71.510	ENSRNOG00000019079	Polr1c	100	71.225	Rattus_norvegicus
ENSGAFG00000010153	polr1c	100	72.080	ENSRBIG00000007155	POLR1C	100	71.795	Rhinopithecus_bieti
ENSGAFG00000010153	polr1c	100	71.795	ENSRROG00000000257	POLR1C	100	71.510	Rhinopithecus_roxellana
ENSGAFG00000010153	polr1c	92	46.894	YPR110C	RPC40	95	46.894	Saccharomyces_cerevisiae
ENSGAFG00000010153	polr1c	100	72.080	ENSSBOG00000025735	POLR1C	99	73.077	Saimiri_boliviensis_boliviensis
ENSGAFG00000010153	polr1c	99	65.903	ENSSHAG00000014456	POLR1C	99	65.903	Sarcophilus_harrisii
ENSGAFG00000010153	polr1c	100	81.766	ENSSFOG00015019860	polr1c	100	81.481	Scleropages_formosus
ENSGAFG00000010153	polr1c	100	86.610	ENSSMAG00000018865	polr1c	100	86.610	Scophthalmus_maximus
ENSGAFG00000010153	polr1c	100	90.598	ENSSDUG00000015745	polr1c	91	90.598	Seriola_dumerili
ENSGAFG00000010153	polr1c	100	90.313	ENSSLDG00000018285	polr1c	91	90.313	Seriola_lalandi_dorsalis
ENSGAFG00000010153	polr1c	99	72.543	ENSSPUG00000011822	POLR1C	99	72.254	Sphenodon_punctatus
ENSGAFG00000010153	polr1c	100	87.749	ENSSPAG00000022369	polr1c	100	87.749	Stegastes_partitus
ENSGAFG00000010153	polr1c	100	71.795	ENSSSCG00000028007	POLR1C	99	71.510	Sus_scrofa
ENSGAFG00000010153	polr1c	97	71.681	ENSTGUG00000009159	POLR1C	99	71.386	Taeniopygia_guttata
ENSGAFG00000010153	polr1c	100	83.761	ENSTRUG00000006264	polr1c	100	83.761	Takifugu_rubripes
ENSGAFG00000010153	polr1c	51	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSGAFG00000010153	polr1c	76	68.914	ENSTTRG00000006344	POLR1C	76	68.539	Tursiops_truncatus
ENSGAFG00000010153	polr1c	100	72.650	ENSUAMG00000025602	POLR1C	100	72.365	Ursus_americanus
ENSGAFG00000010153	polr1c	100	72.650	ENSUMAG00000005938	POLR1C	100	72.365	Ursus_maritimus
ENSGAFG00000010153	polr1c	100	69.801	ENSVVUG00000028922	POLR1C	100	69.801	Vulpes_vulpes
ENSGAFG00000010153	polr1c	100	67.989	ENSXETG00000010882	polr1c	100	67.330	Xenopus_tropicalis
ENSGAFG00000010153	polr1c	100	97.151	ENSXCOG00000014185	polr1c	100	97.151	Xiphophorus_couchianus
ENSGAFG00000010153	polr1c	100	98.006	ENSXMAG00000015076	polr1c	100	98.006	Xiphophorus_maculatus