EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010181 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3741 bases
Position: chrNHOQ01002733.1:4380683-4384423
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015067	RRM_1	PF00076.22	2.7e-39	1	2
ENSGAFP00000015067	RRM_1	PF00076.22	2.7e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015215	-	1851	-	ENSGAFP00000015067	394 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010181	sf3b4	90	39.506	ENSGAFG00000021057	pabpc1l	61	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010181	sf3b4	58	97.807	ENSG00000143368	SF3B4	98	96.791	Homo_sapiens
ENSGAFG00000010181	sf3b4	73	95.848	ENSAPOG00000017647	sf3b4	70	95.730	Acanthochromis_polyacanthus
ENSGAFG00000010181	sf3b4	58	97.807	ENSAMEG00000010073	SF3B4	63	92.453	Ailuropoda_melanoleuca
ENSGAFG00000010181	sf3b4	73	95.502	ENSAOCG00000019801	sf3b4	70	95.374	Amphiprion_ocellaris
ENSGAFG00000010181	sf3b4	73	95.502	ENSAPEG00000010365	sf3b4	70	95.374	Amphiprion_percula
ENSGAFG00000010181	sf3b4	61	98.750	ENSATEG00000012844	sf3b4	66	96.992	Anabas_testudineus
ENSGAFG00000010181	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	64	93.208	Anolis_carolinensis
ENSGAFG00000010181	sf3b4	58	97.807	ENSANAG00000031025	SF3B4	63	92.453	Aotus_nancymaae
ENSGAFG00000010181	sf3b4	73	91.696	ENSACLG00000014260	sf3b4	70	91.815	Astatotilapia_calliptera
ENSGAFG00000010181	sf3b4	61	97.083	ENSAMXG00000008282	sf3b4	66	95.437	Astyanax_mexicanus
ENSGAFG00000010181	sf3b4	51	96.040	ENSBTAG00000012793	-	60	89.344	Bos_taurus
ENSGAFG00000010181	sf3b4	58	97.807	ENSBTAG00000012495	SF3B4	63	92.453	Bos_taurus
ENSGAFG00000010181	sf3b4	57	70.787	ENSCJAG00000042351	SF3B4	50	70.787	Callithrix_jacchus
ENSGAFG00000010181	sf3b4	58	97.807	ENSCAFG00000011617	SF3B4	63	92.453	Canis_familiaris
ENSGAFG00000010181	sf3b4	58	97.807	ENSCAFG00020019775	SF3B4	63	92.453	Canis_lupus_dingo
ENSGAFG00000010181	sf3b4	74	61.462	ENSCHIG00000006654	-	61	62.406	Capra_hircus
ENSGAFG00000010181	sf3b4	58	97.807	ENSCHIG00000025663	-	63	92.453	Capra_hircus
ENSGAFG00000010181	sf3b4	58	97.807	ENSTSYG00000009295	SF3B4	63	92.453	Carlito_syrichta
ENSGAFG00000010181	sf3b4	58	97.807	ENSCPOG00000008267	SF3B4	63	92.453	Cavia_porcellus
ENSGAFG00000010181	sf3b4	58	96.930	ENSCCAG00000021751	-	60	91.698	Cebus_capucinus
ENSGAFG00000010181	sf3b4	74	70.915	ENSCCAG00000019823	-	57	83.058	Cebus_capucinus
ENSGAFG00000010181	sf3b4	58	97.807	ENSCATG00000033114	SF3B4	63	92.453	Cercocebus_atys
ENSGAFG00000010181	sf3b4	58	97.807	ENSCLAG00000015851	SF3B4	63	92.453	Chinchilla_lanigera
ENSGAFG00000010181	sf3b4	58	97.807	ENSCSAG00000018129	SF3B4	63	92.453	Chlorocebus_sabaeus
ENSGAFG00000010181	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	63	93.208	Chrysemys_picta_bellii
ENSGAFG00000010181	sf3b4	57	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSGAFG00000010181	sf3b4	53	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSGAFG00000010181	sf3b4	58	97.807	ENSCANG00000035579	SF3B4	63	92.453	Colobus_angolensis_palliatus
ENSGAFG00000010181	sf3b4	58	97.807	ENSCGRG00001003590	Sf3b4	63	92.453	Cricetulus_griseus_chok1gshd
ENSGAFG00000010181	sf3b4	58	97.807	ENSCGRG00000016914	Sf3b4	63	92.453	Cricetulus_griseus_crigri
ENSGAFG00000010181	sf3b4	76	90.365	ENSCSEG00000015258	sf3b4	56	95.167	Cynoglossus_semilaevis
ENSGAFG00000010181	sf3b4	70	94.891	ENSCVAG00000005536	sf3b4	68	94.737	Cyprinodon_variegatus
ENSGAFG00000010181	sf3b4	61	97.083	ENSDARG00000018574	sf3b4	66	95.833	Danio_rerio
ENSGAFG00000010181	sf3b4	95	66.406	ENSDNOG00000037231	-	61	76.680	Dasypus_novemcinctus
ENSGAFG00000010181	sf3b4	56	92.273	ENSDNOG00000048908	-	61	87.549	Dasypus_novemcinctus
ENSGAFG00000010181	sf3b4	58	97.807	ENSDORG00000016366	Sf3b4	63	92.453	Dipodomys_ordii
ENSGAFG00000010181	sf3b4	58	87.719	ENSETEG00000008963	SF3B4	62	83.774	Echinops_telfairi
ENSGAFG00000010181	sf3b4	58	97.807	ENSEASG00005001477	SF3B4	63	92.453	Equus_asinus_asinus
ENSGAFG00000010181	sf3b4	58	97.807	ENSECAG00000024737	SF3B4	63	92.453	Equus_caballus
ENSGAFG00000010181	sf3b4	88	83.429	ENSELUG00000012876	sf3b4	66	95.849	Esox_lucius
ENSGAFG00000010181	sf3b4	58	97.807	ENSFCAG00000010106	SF3B4	63	92.453	Felis_catus
ENSGAFG00000010181	sf3b4	58	97.807	ENSFDAG00000009286	SF3B4	63	92.453	Fukomys_damarensis
ENSGAFG00000010181	sf3b4	78	80.782	ENSGMOG00000002519	sf3b4	67	98.261	Gadus_morhua
ENSGAFG00000010181	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	63	93.962	Gallus_gallus
ENSGAFG00000010181	sf3b4	58	100.000	ENSGACG00000003819	sf3b4	66	95.038	Gasterosteus_aculeatus
ENSGAFG00000010181	sf3b4	54	100.000	ENSGAGG00000025055	SF3B4	56	93.208	Gopherus_agassizii
ENSGAFG00000010181	sf3b4	58	97.807	ENSGGOG00000004761	SF3B4	63	92.453	Gorilla_gorilla
ENSGAFG00000010181	sf3b4	93	62.725	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSGAFG00000010181	sf3b4	73	91.696	ENSHBUG00000002028	sf3b4	70	91.815	Haplochromis_burtoni
ENSGAFG00000010181	sf3b4	58	97.807	ENSHGLG00000012360	SF3B4	63	92.453	Heterocephalus_glaber_female
ENSGAFG00000010181	sf3b4	58	97.807	ENSHGLG00100008533	SF3B4	63	92.453	Heterocephalus_glaber_male
ENSGAFG00000010181	sf3b4	58	97.357	ENSHCOG00000003014	sf3b4	66	88.636	Hippocampus_comes
ENSGAFG00000010181	sf3b4	61	97.500	ENSIPUG00000012242	Sf3b4	66	95.455	Ictalurus_punctatus
ENSGAFG00000010181	sf3b4	58	97.807	ENSSTOG00000000684	-	63	92.453	Ictidomys_tridecemlineatus
ENSGAFG00000010181	sf3b4	57	71.111	ENSJJAG00000022500	Sf3b4	70	68.605	Jaculus_jaculus
ENSGAFG00000010181	sf3b4	96	87.335	ENSKMAG00000008154	sf3b4	67	96.981	Kryptolebias_marmoratus
ENSGAFG00000010181	sf3b4	59	98.283	ENSLBEG00000026818	sf3b4	66	93.985	Labrus_bergylta
ENSGAFG00000010181	sf3b4	61	95.000	ENSLACG00000004436	SF3B4	73	91.698	Latimeria_chalumnae
ENSGAFG00000010181	sf3b4	61	97.500	ENSLOCG00000009048	sf3b4	63	94.340	Lepisosteus_oculatus
ENSGAFG00000010181	sf3b4	58	97.807	ENSLAFG00000008531	SF3B4	62	92.453	Loxodonta_africana
ENSGAFG00000010181	sf3b4	89	59.836	ENSMFAG00000039067	-	58	78.802	Macaca_fascicularis
ENSGAFG00000010181	sf3b4	58	97.807	ENSMFAG00000042395	SF3B4	63	92.453	Macaca_fascicularis
ENSGAFG00000010181	sf3b4	58	97.807	ENSMMUG00000007256	SF3B4	63	92.453	Macaca_mulatta
ENSGAFG00000010181	sf3b4	58	97.807	ENSMNEG00000031839	SF3B4	63	92.453	Macaca_nemestrina
ENSGAFG00000010181	sf3b4	58	97.807	ENSMLEG00000038667	SF3B4	63	92.453	Mandrillus_leucophaeus
ENSGAFG00000010181	sf3b4	61	97.917	ENSMAMG00000014692	sf3b4	66	95.849	Mastacembelus_armatus
ENSGAFG00000010181	sf3b4	73	91.696	ENSMZEG00005026741	sf3b4	70	91.815	Maylandia_zebra
ENSGAFG00000010181	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	64	93.962	Meleagris_gallopavo
ENSGAFG00000010181	sf3b4	58	97.807	ENSMAUG00000015266	Sf3b4	63	92.453	Mesocricetus_auratus
ENSGAFG00000010181	sf3b4	58	97.807	ENSMICG00000044961	SF3B4	63	92.453	Microcebus_murinus
ENSGAFG00000010181	sf3b4	52	98.049	ENSMOCG00000014155	-	63	89.844	Microtus_ochrogaster
ENSGAFG00000010181	sf3b4	58	97.807	ENSMOCG00000013658	-	63	92.453	Microtus_ochrogaster
ENSGAFG00000010181	sf3b4	76	88.963	ENSMMOG00000018032	sf3b4	67	95.094	Mola_mola
ENSGAFG00000010181	sf3b4	58	97.807	ENSMODG00000018767	SF3B4	63	92.453	Monodelphis_domestica
ENSGAFG00000010181	sf3b4	68	95.149	ENSMALG00000006174	sf3b4	66	95.849	Monopterus_albus
ENSGAFG00000010181	sf3b4	58	97.807	MGP_CAROLIEiJ_G0025365	Sf3b4	60	90.152	Mus_caroli
ENSGAFG00000010181	sf3b4	58	97.807	ENSMUSG00000068856	Sf3b4	63	92.453	Mus_musculus
ENSGAFG00000010181	sf3b4	58	97.807	MGP_PahariEiJ_G0026809	Sf3b4	63	92.453	Mus_pahari
ENSGAFG00000010181	sf3b4	58	97.807	MGP_SPRETEiJ_G0026309	Sf3b4	63	92.453	Mus_spretus
ENSGAFG00000010181	sf3b4	58	97.807	ENSMPUG00000005563	SF3B4	63	92.453	Mustela_putorius_furo
ENSGAFG00000010181	sf3b4	58	97.807	ENSMLUG00000010789	SF3B4	63	92.830	Myotis_lucifugus
ENSGAFG00000010181	sf3b4	58	97.807	ENSNGAG00000016337	Sf3b4	63	92.453	Nannospalax_galili
ENSGAFG00000010181	sf3b4	71	92.527	ENSNBRG00000013865	sf3b4	70	92.527	Neolamprologus_brichardi
ENSGAFG00000010181	sf3b4	98	49.515	ENSNLEG00000009693	-	95	49.515	Nomascus_leucogenys
ENSGAFG00000010181	sf3b4	58	93.421	ENSOPRG00000010808	SF3B4	63	88.679	Ochotona_princeps
ENSGAFG00000010181	sf3b4	91	57.560	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSGAFG00000010181	sf3b4	61	80.083	ENSODEG00000003597	-	66	77.820	Octodon_degus
ENSGAFG00000010181	sf3b4	68	94.361	ENSONIG00000002730	sf3b4	66	94.361	Oreochromis_niloticus
ENSGAFG00000010181	sf3b4	66	72.180	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSGAFG00000010181	sf3b4	58	97.807	ENSOCUG00000004614	SF3B4	63	92.453	Oryctolagus_cuniculus
ENSGAFG00000010181	sf3b4	76	89.369	ENSORLG00000003062	sf3b4	69	93.309	Oryzias_latipes
ENSGAFG00000010181	sf3b4	76	89.369	ENSORLG00020000687	sf3b4	67	93.309	Oryzias_latipes_hni
ENSGAFG00000010181	sf3b4	76	89.369	ENSORLG00015010989	sf3b4	67	93.309	Oryzias_latipes_hsok
ENSGAFG00000010181	sf3b4	59	98.276	ENSOMEG00000013694	sf3b4	68	95.167	Oryzias_melastigma
ENSGAFG00000010181	sf3b4	58	97.807	ENSOGAG00000006265	SF3B4	63	92.453	Otolemur_garnettii
ENSGAFG00000010181	sf3b4	58	97.807	ENSOARG00000020718	-	63	92.453	Ovis_aries
ENSGAFG00000010181	sf3b4	73	72.391	ENSOARG00000007368	-	64	76.538	Ovis_aries
ENSGAFG00000010181	sf3b4	78	72.642	ENSPPAG00000030024	-	64	83.908	Pan_paniscus
ENSGAFG00000010181	sf3b4	58	97.807	ENSPPAG00000040904	SF3B4	63	92.453	Pan_paniscus
ENSGAFG00000010181	sf3b4	58	97.807	ENSPPRG00000007384	SF3B4	63	92.453	Panthera_pardus
ENSGAFG00000010181	sf3b4	58	97.807	ENSPTIG00000014530	SF3B4	63	92.453	Panthera_tigris_altaica
ENSGAFG00000010181	sf3b4	78	76.948	ENSPTRG00000049727	-	66	84.291	Pan_troglodytes
ENSGAFG00000010181	sf3b4	58	97.807	ENSPTRG00000001243	SF3B4	63	92.453	Pan_troglodytes
ENSGAFG00000010181	sf3b4	58	97.807	ENSPANG00000005126	SF3B4	63	92.453	Papio_anubis
ENSGAFG00000010181	sf3b4	59	98.718	ENSPKIG00000020669	sf3b4	70	96.226	Paramormyrops_kingsleyae
ENSGAFG00000010181	sf3b4	64	79.762	ENSPSIG00000009565	SF3B4	74	85.520	Pelodiscus_sinensis
ENSGAFG00000010181	sf3b4	58	97.807	ENSPEMG00000017568	Sf3b4	63	92.453	Peromyscus_maniculatus_bairdii
ENSGAFG00000010181	sf3b4	54	95.305	ENSPMAG00000007842	-	60	86.328	Petromyzon_marinus
ENSGAFG00000010181	sf3b4	58	97.807	ENSPCIG00000008765	SF3B4	63	92.453	Phascolarctos_cinereus
ENSGAFG00000010181	sf3b4	100	98.477	ENSPFOG00000005754	sf3b4	100	98.477	Poecilia_formosa
ENSGAFG00000010181	sf3b4	87	98.240	ENSPLAG00000001401	sf3b4	94	98.240	Poecilia_latipinna
ENSGAFG00000010181	sf3b4	100	97.970	ENSPMEG00000014452	sf3b4	57	97.970	Poecilia_mexicana
ENSGAFG00000010181	sf3b4	87	94.350	ENSPREG00000011076	sf3b4	88	94.350	Poecilia_reticulata
ENSGAFG00000010181	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSGAFG00000010181	sf3b4	58	97.807	ENSPCOG00000015399	SF3B4	63	92.453	Propithecus_coquereli
ENSGAFG00000010181	sf3b4	58	97.807	ENSPVAG00000014171	SF3B4	63	92.453	Pteropus_vampyrus
ENSGAFG00000010181	sf3b4	73	91.696	ENSPNYG00000012700	sf3b4	70	91.815	Pundamilia_nyererei
ENSGAFG00000010181	sf3b4	61	97.917	ENSPNAG00000000686	sf3b4	67	96.212	Pygocentrus_nattereri
ENSGAFG00000010181	sf3b4	58	97.807	ENSRNOG00000021181	Sf3b4	63	92.453	Rattus_norvegicus
ENSGAFG00000010181	sf3b4	58	97.807	ENSRBIG00000043392	SF3B4	63	92.453	Rhinopithecus_bieti
ENSGAFG00000010181	sf3b4	58	97.807	ENSRROG00000029366	SF3B4	63	92.453	Rhinopithecus_roxellana
ENSGAFG00000010181	sf3b4	93	60.847	ENSRROG00000028213	-	56	73.874	Rhinopithecus_roxellana
ENSGAFG00000010181	sf3b4	78	65.517	ENSSBOG00000025174	-	56	70.833	Saimiri_boliviensis_boliviensis
ENSGAFG00000010181	sf3b4	58	97.368	ENSSBOG00000012310	-	63	92.075	Saimiri_boliviensis_boliviensis
ENSGAFG00000010181	sf3b4	58	92.982	ENSSHAG00000004043	SF3B4	62	88.302	Sarcophilus_harrisii
ENSGAFG00000010181	sf3b4	61	98.333	ENSSFOG00015008864	sf3b4	65	96.591	Scleropages_formosus
ENSGAFG00000010181	sf3b4	77	93.770	ENSSMAG00000006837	sf3b4	76	93.770	Scophthalmus_maximus
ENSGAFG00000010181	sf3b4	68	96.617	ENSSDUG00000012064	sf3b4	66	96.617	Seriola_dumerili
ENSGAFG00000010181	sf3b4	68	96.617	ENSSLDG00000014226	sf3b4	66	96.617	Seriola_lalandi_dorsalis
ENSGAFG00000010181	sf3b4	64	93.651	ENSSPUG00000001028	SF3B4	57	98.253	Sphenodon_punctatus
ENSGAFG00000010181	sf3b4	61	97.917	ENSSPAG00000019219	sf3b4	66	96.241	Stegastes_partitus
ENSGAFG00000010181	sf3b4	58	97.807	ENSSSCG00000006665	-	63	92.453	Sus_scrofa
ENSGAFG00000010181	sf3b4	80	55.625	ENSSSCG00000039440	-	64	59.623	Sus_scrofa
ENSGAFG00000010181	sf3b4	60	96.203	ENSTGUG00000004470	SF3B4	90	98.253	Taeniopygia_guttata
ENSGAFG00000010181	sf3b4	80	90.221	ENSTRUG00000004516	sf3b4	67	94.361	Takifugu_rubripes
ENSGAFG00000010181	sf3b4	58	98.690	ENSTNIG00000009156	sf3b4	68	93.233	Tetraodon_nigroviridis
ENSGAFG00000010181	sf3b4	58	97.807	ENSTTRG00000005217	SF3B4	63	92.453	Tursiops_truncatus
ENSGAFG00000010181	sf3b4	58	97.807	ENSUAMG00000022468	SF3B4	63	92.453	Ursus_americanus
ENSGAFG00000010181	sf3b4	58	97.807	ENSUMAG00000003802	SF3B4	63	92.453	Ursus_maritimus
ENSGAFG00000010181	sf3b4	55	97.685	ENSVPAG00000008152	SF3B4	61	92.095	Vicugna_pacos
ENSGAFG00000010181	sf3b4	58	97.807	ENSVVUG00000007732	-	68	92.453	Vulpes_vulpes
ENSGAFG00000010181	sf3b4	57	94.619	ENSVVUG00000022697	-	55	89.615	Vulpes_vulpes
ENSGAFG00000010181	sf3b4	86	72.434	ENSXETG00000011038	sf3b4	66	89.328	Xenopus_tropicalis
ENSGAFG00000010181	sf3b4	100	98.477	ENSXCOG00000019895	sf3b4	100	98.477	Xiphophorus_couchianus
ENSGAFG00000010181	sf3b4	100	98.731	ENSXMAG00000003772	sf3b4	100	98.731	Xiphophorus_maculatus