EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000010265 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8556 bases
Position: chrNHOQ01002459.1:102228-110783
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015212	EXOSC1	PF10447.9	1.4e-14	1	1
ENSGAFP00000015219	EXOSC1	PF10447.9	2.2e-12	1	1
ENSGAFP00000015219	ECR1_N	PF14382.6	3.4e-10	1	1
ENSGAFP00000015212	ECR1_N	PF14382.6	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015361	-	3703	-	ENSGAFP00000015212	204 (aa)	-	-
ENSGAFT00000015368	-	540	-	ENSGAFP00000015219	179 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010265	exosc1	94	76.963	ENSG00000171311	EXOSC1	98	76.963	Homo_sapiens
ENSGAFG00000010265	exosc1	95	89.691	ENSAPOG00000007822	exosc1	100	89.691	Acanthochromis_polyacanthus
ENSGAFG00000010265	exosc1	94	76.963	ENSAMEG00000000129	EXOSC1	98	76.963	Ailuropoda_melanoleuca
ENSGAFG00000010265	exosc1	94	81.863	ENSACIG00000018956	exosc1	100	81.863	Amphilophus_citrinellus
ENSGAFG00000010265	exosc1	95	89.175	ENSAOCG00000010699	exosc1	100	89.175	Amphiprion_ocellaris
ENSGAFG00000010265	exosc1	88	78.889	ENSAPEG00000012690	exosc1	97	78.889	Amphiprion_percula
ENSGAFG00000010265	exosc1	95	88.660	ENSATEG00000018683	exosc1	100	88.660	Anabas_testudineus
ENSGAFG00000010265	exosc1	95	71.134	ENSACAG00000002101	EXOSC1	99	71.134	Anolis_carolinensis
ENSGAFG00000010265	exosc1	94	76.963	ENSANAG00000034669	EXOSC1	98	76.963	Aotus_nancymaae
ENSGAFG00000010265	exosc1	95	88.660	ENSACLG00000021243	exosc1	100	88.660	Astatotilapia_calliptera
ENSGAFG00000010265	exosc1	95	86.598	ENSAMXG00000011116	exosc1	100	86.598	Astyanax_mexicanus
ENSGAFG00000010265	exosc1	94	76.963	ENSBTAG00000012699	EXOSC1	98	76.963	Bos_taurus
ENSGAFG00000010265	exosc1	89	35.079	WBGene00012966	exos-1	92	35.079	Caenorhabditis_elegans
ENSGAFG00000010265	exosc1	94	76.440	ENSCJAG00000016586	EXOSC1	98	76.440	Callithrix_jacchus
ENSGAFG00000010265	exosc1	94	76.042	ENSCAFG00000009068	EXOSC1	93	76.042	Canis_familiaris
ENSGAFG00000010265	exosc1	94	76.042	ENSCAFG00020006002	EXOSC1	93	76.042	Canis_lupus_dingo
ENSGAFG00000010265	exosc1	94	76.963	ENSCHIG00000015253	EXOSC1	98	76.963	Capra_hircus
ENSGAFG00000010265	exosc1	94	75.916	ENSTSYG00000000760	EXOSC1	98	75.916	Carlito_syrichta
ENSGAFG00000010265	exosc1	94	76.042	ENSCPOG00000001173	EXOSC1	98	76.042	Cavia_porcellus
ENSGAFG00000010265	exosc1	93	42.771	ENSCCAG00000023986	EXOSC1	97	42.771	Cebus_capucinus
ENSGAFG00000010265	exosc1	94	76.963	ENSCATG00000034114	EXOSC1	98	76.963	Cercocebus_atys
ENSGAFG00000010265	exosc1	94	76.440	ENSCLAG00000002463	EXOSC1	98	76.440	Chinchilla_lanigera
ENSGAFG00000010265	exosc1	94	76.440	ENSCSAG00000005870	EXOSC1	98	76.440	Chlorocebus_sabaeus
ENSGAFG00000010265	exosc1	90	64.674	ENSCHOG00000006477	EXOSC1	98	64.674	Choloepus_hoffmanni
ENSGAFG00000010265	exosc1	52	65.421	ENSCPBG00000011949	EXOSC1	88	65.421	Chrysemys_picta_bellii
ENSGAFG00000010265	exosc1	94	50.259	ENSCING00000022734	-	92	50.259	Ciona_intestinalis
ENSGAFG00000010265	exosc1	94	55.440	ENSCSAVG00000010865	-	98	55.440	Ciona_savignyi
ENSGAFG00000010265	exosc1	94	76.963	ENSCANG00000034159	EXOSC1	98	76.963	Colobus_angolensis_palliatus
ENSGAFG00000010265	exosc1	94	75.393	ENSCGRG00001000335	Exosc1	98	75.393	Cricetulus_griseus_chok1gshd
ENSGAFG00000010265	exosc1	94	75.393	ENSCGRG00000011602	Exosc1	98	75.393	Cricetulus_griseus_crigri
ENSGAFG00000010265	exosc1	97	86.705	ENSCSEG00000007895	exosc1	99	86.705	Cynoglossus_semilaevis
ENSGAFG00000010265	exosc1	95	95.361	ENSCVAG00000016748	exosc1	100	95.361	Cyprinodon_variegatus
ENSGAFG00000010265	exosc1	95	86.598	ENSDARG00000059841	exosc1	100	86.598	Danio_rerio
ENSGAFG00000010265	exosc1	71	74.483	ENSDNOG00000007983	EXOSC1	98	74.483	Dasypus_novemcinctus
ENSGAFG00000010265	exosc1	94	75.916	ENSDORG00000016528	Exosc1	98	75.916	Dipodomys_ordii
ENSGAFG00000010265	exosc1	95	47.739	FBgn0032346	Csl4	97	47.739	Drosophila_melanogaster
ENSGAFG00000010265	exosc1	94	74.869	ENSETEG00000002469	-	98	74.869	Echinops_telfairi
ENSGAFG00000010265	exosc1	93	62.500	ENSEBUG00000008164	exosc1	96	62.500	Eptatretus_burgeri
ENSGAFG00000010265	exosc1	94	68.063	ENSEASG00005008684	EXOSC1	98	69.022	Equus_asinus_asinus
ENSGAFG00000010265	exosc1	57	55.172	ENSECAG00000010621	EXOSC1	69	55.963	Equus_caballus
ENSGAFG00000010265	exosc1	94	75.916	ENSEEUG00000005647	EXOSC1	98	75.916	Erinaceus_europaeus
ENSGAFG00000010265	exosc1	94	83.249	ENSELUG00000017369	exosc1	100	81.395	Esox_lucius
ENSGAFG00000010265	exosc1	94	76.963	ENSFCAG00000040563	EXOSC1	98	75.301	Felis_catus
ENSGAFG00000010265	exosc1	94	74.346	ENSFALG00000008450	EXOSC1	98	74.346	Ficedula_albicollis
ENSGAFG00000010265	exosc1	94	76.963	ENSFDAG00000000846	EXOSC1	98	76.963	Fukomys_damarensis
ENSGAFG00000010265	exosc1	95	95.876	ENSFHEG00000009154	exosc1	100	95.876	Fundulus_heteroclitus
ENSGAFG00000010265	exosc1	95	86.598	ENSGMOG00000008993	exosc1	100	86.598	Gadus_morhua
ENSGAFG00000010265	exosc1	93	72.892	ENSGALG00000039917	EXOSC1	99	79.310	Gallus_gallus
ENSGAFG00000010265	exosc1	95	86.082	ENSGACG00000018936	exosc1	100	86.082	Gasterosteus_aculeatus
ENSGAFG00000010265	exosc1	94	73.298	ENSGAGG00000019192	EXOSC1	98	73.298	Gopherus_agassizii
ENSGAFG00000010265	exosc1	93	74.699	ENSGGOG00000003099	EXOSC1	98	74.699	Gorilla_gorilla
ENSGAFG00000010265	exosc1	95	88.660	ENSHBUG00000017857	exosc1	100	88.660	Haplochromis_burtoni
ENSGAFG00000010265	exosc1	94	76.440	ENSHGLG00000016927	EXOSC1	98	76.440	Heterocephalus_glaber_female
ENSGAFG00000010265	exosc1	94	76.440	ENSHGLG00100012208	EXOSC1	98	76.440	Heterocephalus_glaber_male
ENSGAFG00000010265	exosc1	95	87.629	ENSHCOG00000019882	exosc1	100	87.629	Hippocampus_comes
ENSGAFG00000010265	exosc1	95	85.052	ENSIPUG00000007685	exosc1	100	85.052	Ictalurus_punctatus
ENSGAFG00000010265	exosc1	94	75.521	ENSSTOG00000006615	EXOSC1	98	75.521	Ictidomys_tridecemlineatus
ENSGAFG00000010265	exosc1	58	62.185	ENSSTOG00000029860	-	91	62.185	Ictidomys_tridecemlineatus
ENSGAFG00000010265	exosc1	94	76.963	ENSJJAG00000013311	Exosc1	98	76.963	Jaculus_jaculus
ENSGAFG00000010265	exosc1	98	87.000	ENSKMAG00000001202	exosc1	84	87.000	Kryptolebias_marmoratus
ENSGAFG00000010265	exosc1	95	88.660	ENSLBEG00000011448	exosc1	100	88.660	Labrus_bergylta
ENSGAFG00000010265	exosc1	95	62.000	ENSLOCG00000003776	exosc1	100	62.000	Lepisosteus_oculatus
ENSGAFG00000010265	exosc1	94	76.440	ENSLAFG00000015983	EXOSC1	98	76.440	Loxodonta_africana
ENSGAFG00000010265	exosc1	94	76.963	ENSMFAG00000001493	EXOSC1	98	76.963	Macaca_fascicularis
ENSGAFG00000010265	exosc1	94	76.963	ENSMMUG00000020028	EXOSC1	98	75.301	Macaca_mulatta
ENSGAFG00000010265	exosc1	94	76.963	ENSMNEG00000029816	EXOSC1	98	76.963	Macaca_nemestrina
ENSGAFG00000010265	exosc1	94	72.251	ENSMLEG00000027643	EXOSC1	98	72.251	Mandrillus_leucophaeus
ENSGAFG00000010265	exosc1	95	90.722	ENSMAMG00000012200	exosc1	100	90.722	Mastacembelus_armatus
ENSGAFG00000010265	exosc1	95	88.660	ENSMZEG00005007042	exosc1	100	88.660	Maylandia_zebra
ENSGAFG00000010265	exosc1	93	74.699	ENSMAUG00000020462	-	98	74.699	Mesocricetus_auratus
ENSGAFG00000010265	exosc1	94	76.562	ENSMICG00000007664	EXOSC1	98	75.449	Microcebus_murinus
ENSGAFG00000010265	exosc1	94	75.393	ENSMOCG00000006004	-	98	75.393	Microtus_ochrogaster
ENSGAFG00000010265	exosc1	93	70.526	ENSMOCG00000017124	-	97	70.526	Microtus_ochrogaster
ENSGAFG00000010265	exosc1	95	67.010	ENSMMOG00000021403	exosc1	100	67.010	Mola_mola
ENSGAFG00000010265	exosc1	94	75.648	ENSMODG00000004213	EXOSC1	98	75.648	Monodelphis_domestica
ENSGAFG00000010265	exosc1	91	90.270	ENSMALG00000007061	exosc1	93	90.270	Monopterus_albus
ENSGAFG00000010265	exosc1	94	74.869	MGP_CAROLIEiJ_G0022959	Exosc1	98	74.869	Mus_caroli
ENSGAFG00000010265	exosc1	94	75.393	ENSMUSG00000034321	Exosc1	98	75.393	Mus_musculus
ENSGAFG00000010265	exosc1	94	75.393	MGP_PahariEiJ_G0014449	Exosc1	98	75.393	Mus_pahari
ENSGAFG00000010265	exosc1	94	74.869	MGP_SPRETEiJ_G0023880	Exosc1	98	74.869	Mus_spretus
ENSGAFG00000010265	exosc1	94	76.963	ENSMPUG00000017044	EXOSC1	98	76.963	Mustela_putorius_furo
ENSGAFG00000010265	exosc1	94	76.440	ENSMLUG00000009228	EXOSC1	98	76.440	Myotis_lucifugus
ENSGAFG00000010265	exosc1	94	74.346	ENSNGAG00000022033	Exosc1	98	74.346	Nannospalax_galili
ENSGAFG00000010265	exosc1	96	69.744	ENSNBRG00000024007	exosc1	100	69.744	Neolamprologus_brichardi
ENSGAFG00000010265	exosc1	94	76.440	ENSNLEG00000013872	EXOSC1	98	76.440	Nomascus_leucogenys
ENSGAFG00000010265	exosc1	55	70.536	ENSMEUG00000002246	EXOSC1	97	70.536	Notamacropus_eugenii
ENSGAFG00000010265	exosc1	94	75.000	ENSOPRG00000005065	EXOSC1	98	75.000	Ochotona_princeps
ENSGAFG00000010265	exosc1	94	76.963	ENSODEG00000016709	EXOSC1	98	76.963	Octodon_degus
ENSGAFG00000010265	exosc1	96	88.718	ENSONIG00000017683	exosc1	100	88.718	Oreochromis_niloticus
ENSGAFG00000010265	exosc1	64	85.965	ENSOANG00000006563	EXOSC1	98	82.927	Ornithorhynchus_anatinus
ENSGAFG00000010265	exosc1	94	70.312	ENSOCUG00000026461	-	98	70.312	Oryctolagus_cuniculus
ENSGAFG00000010265	exosc1	94	75.000	ENSOCUG00000011898	-	98	75.000	Oryctolagus_cuniculus
ENSGAFG00000010265	exosc1	95	86.667	ENSORLG00000011595	exosc1	100	86.667	Oryzias_latipes
ENSGAFG00000010265	exosc1	95	86.667	ENSORLG00020005831	exosc1	100	86.667	Oryzias_latipes_hni
ENSGAFG00000010265	exosc1	95	86.667	ENSORLG00015004317	exosc1	100	86.667	Oryzias_latipes_hsok
ENSGAFG00000010265	exosc1	96	74.359	ENSOMEG00000013907	exosc1	100	74.359	Oryzias_melastigma
ENSGAFG00000010265	exosc1	94	76.440	ENSOGAG00000016259	EXOSC1	98	76.440	Otolemur_garnettii
ENSGAFG00000010265	exosc1	94	76.440	ENSOARG00000010136	EXOSC1	98	76.440	Ovis_aries
ENSGAFG00000010265	exosc1	94	72.021	ENSPPAG00000039842	EXOSC1	98	72.021	Pan_paniscus
ENSGAFG00000010265	exosc1	94	76.963	ENSPPRG00000023366	EXOSC1	98	76.963	Panthera_pardus
ENSGAFG00000010265	exosc1	94	76.963	ENSPTIG00000017701	EXOSC1	98	76.963	Panthera_tigris_altaica
ENSGAFG00000010265	exosc1	94	76.963	ENSPTRG00000002808	EXOSC1	98	76.963	Pan_troglodytes
ENSGAFG00000010265	exosc1	94	76.963	ENSPANG00000021324	EXOSC1	98	76.963	Papio_anubis
ENSGAFG00000010265	exosc1	95	86.598	ENSPKIG00000016037	exosc1	100	86.598	Paramormyrops_kingsleyae
ENSGAFG00000010265	exosc1	75	71.975	ENSPSIG00000013571	EXOSC1	98	74.380	Pelodiscus_sinensis
ENSGAFG00000010265	exosc1	94	89.349	ENSPMGG00000014002	exosc1	100	89.349	Periophthalmus_magnuspinnatus
ENSGAFG00000010265	exosc1	94	75.393	ENSPEMG00000010710	-	98	75.393	Peromyscus_maniculatus_bairdii
ENSGAFG00000010265	exosc1	91	65.241	ENSPMAG00000000195	exosc1	95	65.241	Petromyzon_marinus
ENSGAFG00000010265	exosc1	94	75.521	ENSPCIG00000002210	EXOSC1	97	75.521	Phascolarctos_cinereus
ENSGAFG00000010265	exosc1	100	98.039	ENSPFOG00000006755	exosc1	100	98.039	Poecilia_formosa
ENSGAFG00000010265	exosc1	95	98.454	ENSPLAG00000005880	exosc1	100	98.454	Poecilia_latipinna
ENSGAFG00000010265	exosc1	100	98.039	ENSPMEG00000015598	exosc1	100	98.039	Poecilia_mexicana
ENSGAFG00000010265	exosc1	100	97.765	ENSPREG00000000405	exosc1	100	97.765	Poecilia_reticulata
ENSGAFG00000010265	exosc1	94	76.562	ENSPPYG00000002531	EXOSC1	98	76.562	Pongo_abelii
ENSGAFG00000010265	exosc1	94	75.393	ENSPCAG00000009135	EXOSC1	98	75.393	Procavia_capensis
ENSGAFG00000010265	exosc1	94	71.728	ENSPCOG00000027539	EXOSC1	98	71.728	Propithecus_coquereli
ENSGAFG00000010265	exosc1	94	76.440	ENSPVAG00000003372	EXOSC1	98	76.440	Pteropus_vampyrus
ENSGAFG00000010265	exosc1	95	88.660	ENSPNYG00000021745	exosc1	100	88.660	Pundamilia_nyererei
ENSGAFG00000010265	exosc1	95	85.567	ENSPNAG00000001944	exosc1	100	85.567	Pygocentrus_nattereri
ENSGAFG00000010265	exosc1	94	75.393	ENSRNOG00000048708	Exosc1	98	75.393	Rattus_norvegicus
ENSGAFG00000010265	exosc1	94	76.963	ENSRBIG00000035618	EXOSC1	98	76.963	Rhinopithecus_bieti
ENSGAFG00000010265	exosc1	94	76.963	ENSRROG00000032589	EXOSC1	98	75.301	Rhinopithecus_roxellana
ENSGAFG00000010265	exosc1	94	76.963	ENSSBOG00000000359	EXOSC1	98	76.963	Saimiri_boliviensis_boliviensis
ENSGAFG00000010265	exosc1	72	82.993	ENSSHAG00000018219	EXOSC1	100	82.993	Sarcophilus_harrisii
ENSGAFG00000010265	exosc1	95	82.474	ENSSFOG00015016289	-	100	82.474	Scleropages_formosus
ENSGAFG00000010265	exosc1	95	84.536	ENSSFOG00015009069	exosc1	100	84.536	Scleropages_formosus
ENSGAFG00000010265	exosc1	95	88.660	ENSSMAG00000003721	exosc1	100	88.660	Scophthalmus_maximus
ENSGAFG00000010265	exosc1	95	87.629	ENSSDUG00000002993	exosc1	100	87.629	Seriola_dumerili
ENSGAFG00000010265	exosc1	95	87.629	ENSSLDG00000025181	exosc1	100	87.629	Seriola_lalandi_dorsalis
ENSGAFG00000010265	exosc1	94	64.921	ENSSARG00000000162	EXOSC1	98	64.921	Sorex_araneus
ENSGAFG00000010265	exosc1	94	70.681	ENSSPUG00000012263	EXOSC1	98	70.681	Sphenodon_punctatus
ENSGAFG00000010265	exosc1	98	81.500	ENSSPAG00000016792	exosc1	86	81.500	Stegastes_partitus
ENSGAFG00000010265	exosc1	94	76.440	ENSSSCG00000010518	EXOSC1	89	76.440	Sus_scrofa
ENSGAFG00000010265	exosc1	94	73.298	ENSTGUG00000009692	EXOSC1	98	73.298	Taeniopygia_guttata
ENSGAFG00000010265	exosc1	93	79.474	ENSTRUG00000007706	exosc1	98	79.474	Takifugu_rubripes
ENSGAFG00000010265	exosc1	96	77.778	ENSTNIG00000014079	exosc1	99	77.778	Tetraodon_nigroviridis
ENSGAFG00000010265	exosc1	94	70.681	ENSTBEG00000006011	EXOSC1	98	70.681	Tupaia_belangeri
ENSGAFG00000010265	exosc1	90	77.596	ENSTTRG00000009887	EXOSC1	99	77.596	Tursiops_truncatus
ENSGAFG00000010265	exosc1	94	60.714	ENSUAMG00000010266	EXOSC1	98	60.714	Ursus_americanus
ENSGAFG00000010265	exosc1	94	61.458	ENSUMAG00000022002	EXOSC1	98	61.458	Ursus_maritimus
ENSGAFG00000010265	exosc1	94	76.440	ENSVVUG00000023192	EXOSC1	62	76.440	Vulpes_vulpes
ENSGAFG00000010265	exosc1	95	73.575	ENSXETG00000003434	exosc1	99	73.575	Xenopus_tropicalis
ENSGAFG00000010265	exosc1	68	99.174	ENSXCOG00000014499	exosc1	93	99.174	Xiphophorus_couchianus
ENSGAFG00000010265	exosc1	100	98.324	ENSXMAG00000023382	exosc1	100	98.324	Xiphophorus_maculatus