EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000010269 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: si:ch211-256m1.8
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8658 bases
Position: chrNHOQ01000074.1:2532094-2540751
Accession: ZDB-GENE-131127-417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015211	tRNA-synt_2	PF00152.20	3.6e-28	1	1
ENSGAFP00000015215	tRNA-synt_2	PF00152.20	3.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015364	-	6218	-	ENSGAFP00000015215	1577 (aa)	-	-
ENSGAFT00000015360	-	6028	-	ENSGAFP00000015211	1577 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010269	si:ch211-256m1.8	100	76.943	ENSAPOG00000007012	si:ch211-256m1.8	100	76.943	Acanthochromis_polyacanthus
ENSGAFG00000010269	si:ch211-256m1.8	100	77.385	ENSAOCG00000012258	si:ch211-256m1.8	100	77.385	Amphiprion_ocellaris
ENSGAFG00000010269	si:ch211-256m1.8	100	77.258	ENSAPEG00000002724	si:ch211-256m1.8	100	77.258	Amphiprion_percula
ENSGAFG00000010269	si:ch211-256m1.8	100	77.764	ENSATEG00000006278	si:ch211-256m1.8	100	77.764	Anabas_testudineus
ENSGAFG00000010269	si:ch211-256m1.8	100	77.701	ENSACLG00000011503	si:ch211-256m1.8	100	77.701	Astatotilapia_calliptera
ENSGAFG00000010269	si:ch211-256m1.8	100	67.461	ENSAMXG00000038245	si:ch211-256m1.8	100	67.461	Astyanax_mexicanus
ENSGAFG00000010269	si:ch211-256m1.8	100	73.065	ENSCSEG00000006255	si:ch211-256m1.8	100	73.065	Cynoglossus_semilaevis
ENSGAFG00000010269	si:ch211-256m1.8	100	87.017	ENSCVAG00000003376	si:ch211-256m1.8	100	87.017	Cyprinodon_variegatus
ENSGAFG00000010269	si:ch211-256m1.8	100	65.657	ENSDARG00000055172	si:ch211-256m1.8	100	65.657	Danio_rerio
ENSGAFG00000010269	si:ch211-256m1.8	100	68.128	ENSELUG00000010546	si:ch211-256m1.8	100	68.128	Esox_lucius
ENSGAFG00000010269	si:ch211-256m1.8	100	86.004	ENSFHEG00000005847	si:ch211-256m1.8	100	86.004	Fundulus_heteroclitus
ENSGAFG00000010269	si:ch211-256m1.8	100	77.890	ENSHBUG00000014407	si:ch211-256m1.8	100	77.890	Haplochromis_burtoni
ENSGAFG00000010269	si:ch211-256m1.8	100	71.311	ENSHCOG00000006884	si:ch211-256m1.8	100	71.524	Hippocampus_comes
ENSGAFG00000010269	si:ch211-256m1.8	100	65.176	ENSIPUG00000022659	si:ch211-256m1.8	100	65.176	Ictalurus_punctatus
ENSGAFG00000010269	si:ch211-256m1.8	100	81.001	ENSKMAG00000016377	si:ch211-256m1.8	100	81.001	Kryptolebias_marmoratus
ENSGAFG00000010269	si:ch211-256m1.8	100	77.953	ENSLBEG00000010639	si:ch211-256m1.8	100	77.953	Labrus_bergylta
ENSGAFG00000010269	si:ch211-256m1.8	100	59.338	ENSLOCG00000011127	si:ch211-256m1.8	100	59.338	Lepisosteus_oculatus
ENSGAFG00000010269	si:ch211-256m1.8	99	76.791	ENSMAMG00000005651	si:ch211-256m1.8	99	76.791	Mastacembelus_armatus
ENSGAFG00000010269	si:ch211-256m1.8	100	77.764	ENSMZEG00005006924	si:ch211-256m1.8	100	77.764	Maylandia_zebra
ENSGAFG00000010269	si:ch211-256m1.8	100	73.048	ENSMMOG00000001736	si:ch211-256m1.8	100	73.048	Mola_mola
ENSGAFG00000010269	si:ch211-256m1.8	100	77.701	ENSNBRG00000005143	si:ch211-256m1.8	100	77.701	Neolamprologus_brichardi
ENSGAFG00000010269	si:ch211-256m1.8	100	76.266	ENSORLG00000022248	si:ch211-256m1.8	100	76.266	Oryzias_latipes
ENSGAFG00000010269	si:ch211-256m1.8	100	76.013	ENSORLG00020000214	si:ch211-256m1.8	100	76.013	Oryzias_latipes_hni
ENSGAFG00000010269	si:ch211-256m1.8	100	75.807	ENSORLG00015020297	si:ch211-256m1.8	100	75.807	Oryzias_latipes_hsok
ENSGAFG00000010269	si:ch211-256m1.8	100	76.567	ENSOMEG00000004519	si:ch211-256m1.8	100	76.567	Oryzias_melastigma
ENSGAFG00000010269	si:ch211-256m1.8	95	66.448	ENSPKIG00000007399	si:ch211-256m1.8	99	66.448	Paramormyrops_kingsleyae
ENSGAFG00000010269	si:ch211-256m1.8	100	65.783	ENSPMGG00000007698	si:ch211-256m1.8	100	65.783	Periophthalmus_magnuspinnatus
ENSGAFG00000010269	si:ch211-256m1.8	100	95.117	ENSPFOG00000005178	si:ch211-256m1.8	100	95.117	Poecilia_formosa
ENSGAFG00000010269	si:ch211-256m1.8	100	94.990	ENSPLAG00000006872	si:ch211-256m1.8	100	94.990	Poecilia_latipinna
ENSGAFG00000010269	si:ch211-256m1.8	100	94.927	ENSPMEG00000021815	si:ch211-256m1.8	100	94.927	Poecilia_mexicana
ENSGAFG00000010269	si:ch211-256m1.8	100	94.230	ENSPREG00000018669	si:ch211-256m1.8	100	94.230	Poecilia_reticulata
ENSGAFG00000010269	si:ch211-256m1.8	100	77.764	ENSPNYG00000018038	si:ch211-256m1.8	100	77.764	Pundamilia_nyererei
ENSGAFG00000010269	si:ch211-256m1.8	99	67.420	ENSPNAG00000003552	si:ch211-256m1.8	99	67.315	Pygocentrus_nattereri
ENSGAFG00000010269	si:ch211-256m1.8	99	65.766	ENSPNAG00000018965	-	99	65.766	Pygocentrus_nattereri
ENSGAFG00000010269	si:ch211-256m1.8	100	64.411	ENSSFOG00015008344	si:ch211-256m1.8	100	64.411	Scleropages_formosus
ENSGAFG00000010269	si:ch211-256m1.8	100	78.080	ENSSMAG00000007562	si:ch211-256m1.8	100	78.080	Scophthalmus_maximus
ENSGAFG00000010269	si:ch211-256m1.8	100	79.481	ENSSDUG00000018180	si:ch211-256m1.8	100	79.481	Seriola_dumerili
ENSGAFG00000010269	si:ch211-256m1.8	100	79.607	ENSSLDG00000020310	si:ch211-256m1.8	100	79.607	Seriola_lalandi_dorsalis
ENSGAFG00000010269	si:ch211-256m1.8	100	77.953	ENSSPAG00000013419	si:ch211-256m1.8	100	77.953	Stegastes_partitus
ENSGAFG00000010269	si:ch211-256m1.8	100	68.076	ENSTRUG00000023803	si:ch211-256m1.8	100	68.076	Takifugu_rubripes
ENSGAFG00000010269	si:ch211-256m1.8	100	97.400	ENSXCOG00000017726	si:ch211-256m1.8	100	97.400	Xiphophorus_couchianus
ENSGAFG00000010269	si:ch211-256m1.8	100	97.464	ENSXMAG00000026576	si:ch211-256m1.8	100	97.464	Xiphophorus_maculatus