EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:109966
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 19290 bases
Position: chrNHOQ01001193.1:1936157-1955446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015220	KH_1	PF00013.29	1e-54	1	3
ENSGAFP00000015220	KH_1	PF00013.29	1e-54	2	3
ENSGAFP00000015220	KH_1	PF00013.29	1e-54	3	3
ENSGAFP00000015220	KH_2	PF07650.17	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015369	-	3853	-	ENSGAFP00000015220	327 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010274	-	63	42.857	ENSGAFG00000003656	-	50	42.308
ENSGAFG00000010274	-	73	38.571	ENSGAFG00000020972	fubp1	53	38.571
ENSGAFG00000010274	-	87	38.462	ENSGAFG00000010840	FUBP3	71	38.462
ENSGAFG00000010274	-	92	63.497	ENSGAFG00000021090	-	69	63.497
ENSGAFG00000010274	-	94	78.896	ENSGAFG00000007972	pcbp2	96	78.896
ENSGAFG00000010274	-	94	77.778	ENSGAFG00000013273	PCBP2	96	77.778
ENSGAFG00000010274	-	73	39.706	ENSGAFG00000016382	nova1	53	39.706
ENSGAFG00000010274	-	80	78.155	ENSGAFG00000017864	zgc:110045	91	78.155
ENSGAFG00000010274	-	91	33.750	ENSGAFG00000010504	igf2bp2b	65	33.750
ENSGAFG00000010274	-	94	34.507	ENSGAFG00000017992	igf2bp3	68	34.507
ENSGAFG00000010274	-	77	68.293	ENSGAFG00000018301	pcbp4	69	68.293
ENSGAFG00000010274	-	76	54.545	ENSGAFG00000013791	hnrnpk	55	53.623
ENSGAFG00000010274	-	95	34.375	ENSGAFG00000019255	-	73	34.375
ENSGAFG00000010274	-	77	53.623	ENSGAFG00000012633	hnrpkl	55	53.623
ENSGAFG00000010274	-	92	30.657	ENSGAFG00000006445	igf2bp1	73	30.657
ENSGAFG00000010274	-	69	35.443	ENSGAFG00000010469	khsrp	54	35.443
ENSGAFG00000010274	-	95	86.186	ENSGAFG00000011430	pcbp3	96	86.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010274	-	95	94.516	ENSAPOG00000020003	pcbp3	86	94.516	Acanthochromis_polyacanthus
ENSGAFG00000010274	-	100	99.388	ENSAPOG00000016582	-	100	99.388	Acanthochromis_polyacanthus
ENSGAFG00000010274	-	93	91.331	ENSAMEG00000001697	-	96	86.982	Ailuropoda_melanoleuca
ENSGAFG00000010274	-	100	88.000	ENSACIG00000010933	pcbp3	100	88.000	Amphilophus_citrinellus
ENSGAFG00000010274	-	95	94.025	ENSACIG00000002739	-	97	94.025	Amphilophus_citrinellus
ENSGAFG00000010274	-	97	95.268	ENSAOCG00000008592	-	100	95.268	Amphiprion_ocellaris
ENSGAFG00000010274	-	91	94.700	ENSAOCG00000007806	-	97	94.700	Amphiprion_ocellaris
ENSGAFG00000010274	-	95	97.106	ENSAPEG00000005209	-	97	97.106	Amphiprion_percula
ENSGAFG00000010274	-	100	90.341	ENSAPEG00000008011	pcbp3	100	90.341	Amphiprion_percula
ENSGAFG00000010274	-	95	87.988	ENSATEG00000015787	-	100	87.988	Anabas_testudineus
ENSGAFG00000010274	-	95	96.463	ENSATEG00000009833	-	97	96.463	Anabas_testudineus
ENSGAFG00000010274	-	98	75.204	ENSAPLG00000008951	-	82	75.204	Anas_platyrhynchos
ENSGAFG00000010274	-	93	92.767	ENSAPLG00000002975	-	95	92.767	Anas_platyrhynchos
ENSGAFG00000010274	-	95	83.183	ENSACAG00000009819	-	96	83.183	Anolis_carolinensis
ENSGAFG00000010274	-	93	85.303	ENSACAG00000004607	-	96	85.303	Anolis_carolinensis
ENSGAFG00000010274	-	91	96.491	ENSANAG00000030702	-	96	96.491	Aotus_nancymaae
ENSGAFG00000010274	-	100	98.777	ENSACLG00000003801	-	100	98.777	Astatotilapia_calliptera
ENSGAFG00000010274	-	100	89.489	ENSACLG00000011835	pcbp3	100	89.489	Astatotilapia_calliptera
ENSGAFG00000010274	-	100	92.000	ENSAMXG00000003440	pcbp3	100	92.000	Astyanax_mexicanus
ENSGAFG00000010274	-	93	67.372	ENSAMXG00000001760	zgc:110045	73	67.372	Astyanax_mexicanus
ENSGAFG00000010274	-	95	92.258	ENSAMXG00000013588	-	100	92.258	Astyanax_mexicanus
ENSGAFG00000010274	-	89	97.380	ENSCAFG00020019472	-	81	97.380	Canis_lupus_dingo
ENSGAFG00000010274	-	93	97.039	ENSCSAG00000007440	-	87	97.039	Chlorocebus_sabaeus
ENSGAFG00000010274	-	98	93.125	ENSCPBG00000012151	-	95	93.125	Chrysemys_picta_bellii
ENSGAFG00000010274	-	99	80.172	ENSCPBG00000000733	-	77	79.261	Chrysemys_picta_bellii
ENSGAFG00000010274	-	95	93.226	ENSCSEG00000000822	pcbp3	99	93.226	Cynoglossus_semilaevis
ENSGAFG00000010274	-	95	78.338	ENSCSEG00000016984	-	94	82.128	Cynoglossus_semilaevis
ENSGAFG00000010274	-	100	99.083	ENSCVAG00000005262	-	100	99.083	Cyprinodon_variegatus
ENSGAFG00000010274	-	100	90.057	ENSCVAG00000014482	pcbp3	100	90.057	Cyprinodon_variegatus
ENSGAFG00000010274	-	100	92.286	ENSDARG00000054378	pcbp3	100	92.286	Danio_rerio
ENSGAFG00000010274	-	93	82.895	ENSETEG00000015988	-	95	82.895	Echinops_telfairi
ENSGAFG00000010274	-	91	73.333	ENSEBUG00000016192	pcbp3	99	73.606	Eptatretus_burgeri
ENSGAFG00000010274	-	94	80.892	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSGAFG00000010274	-	90	70.850	ENSEBUG00000005495	pcbp3	74	70.850	Eptatretus_burgeri
ENSGAFG00000010274	-	100	98.165	ENSELUG00000001560	-	91	98.165	Esox_lucius
ENSGAFG00000010274	-	100	90.368	ENSELUG00000003521	pcbp3	100	90.368	Esox_lucius
ENSGAFG00000010274	-	98	75.477	ENSFALG00000004411	-	77	75.477	Ficedula_albicollis
ENSGAFG00000010274	-	93	96.711	ENSFALG00000003949	-	95	96.711	Ficedula_albicollis
ENSGAFG00000010274	-	97	92.429	ENSFHEG00000016615	pcbp3	97	92.429	Fundulus_heteroclitus
ENSGAFG00000010274	-	95	96.463	ENSFHEG00000006539	-	97	96.463	Fundulus_heteroclitus
ENSGAFG00000010274	-	94	70.821	ENSGMOG00000008611	-	99	70.821	Gadus_morhua
ENSGAFG00000010274	-	94	81.381	ENSGMOG00000011992	pcbp3	96	81.381	Gadus_morhua
ENSGAFG00000010274	-	94	83.082	ENSGALG00000013155	-	98	81.040	Gallus_gallus
ENSGAFG00000010274	-	93	82.709	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSGAFG00000010274	-	95	92.145	ENSGACG00000002266	-	97	92.145	Gasterosteus_aculeatus
ENSGAFG00000010274	-	95	81.303	ENSGACG00000014955	-	97	81.303	Gasterosteus_aculeatus
ENSGAFG00000010274	-	89	89.139	ENSGAGG00000000271	-	100	89.139	Gopherus_agassizii
ENSGAFG00000010274	-	76	87.368	ENSGAGG00000006956	-	76	87.368	Gopherus_agassizii
ENSGAFG00000010274	-	100	98.777	ENSHBUG00000021782	-	100	98.777	Haplochromis_burtoni
ENSGAFG00000010274	-	100	89.489	ENSHBUG00000010697	pcbp3	98	93.871	Haplochromis_burtoni
ENSGAFG00000010274	-	95	93.248	ENSHCOG00000006067	-	97	93.248	Hippocampus_comes
ENSGAFG00000010274	-	100	90.313	ENSHCOG00000017868	pcbp3	100	90.313	Hippocampus_comes
ENSGAFG00000010274	-	95	95.177	ENSIPUG00000006238	pcbp3	97	95.177	Ictalurus_punctatus
ENSGAFG00000010274	-	100	98.471	ENSKMAG00000018530	-	100	98.471	Kryptolebias_marmoratus
ENSGAFG00000010274	-	100	90.341	ENSKMAG00000003046	pcbp3	100	90.341	Kryptolebias_marmoratus
ENSGAFG00000010274	-	100	82.831	ENSLBEG00000006542	-	100	82.831	Labrus_bergylta
ENSGAFG00000010274	-	96	93.291	ENSLBEG00000006201	pcbp3	96	93.291	Labrus_bergylta
ENSGAFG00000010274	-	99	74.865	ENSLACG00000010804	zgc:110045	78	74.865	Latimeria_chalumnae
ENSGAFG00000010274	-	97	80.992	ENSLACG00000010386	pcbp3	77	80.992	Latimeria_chalumnae
ENSGAFG00000010274	-	93	83.180	ENSLOCG00000005058	zgc:110045	80	83.180	Lepisosteus_oculatus
ENSGAFG00000010274	-	93	91.358	ENSLOCG00000009369	pcbp3	96	91.358	Lepisosteus_oculatus
ENSGAFG00000010274	-	95	94.194	ENSMAMG00000022336	pcbp3	93	94.194	Mastacembelus_armatus
ENSGAFG00000010274	-	95	95.177	ENSMAMG00000011620	-	97	95.177	Mastacembelus_armatus
ENSGAFG00000010274	-	100	87.714	ENSMZEG00005008993	pcbp3	100	87.714	Maylandia_zebra
ENSGAFG00000010274	-	100	89.053	ENSMZEG00005014882	-	100	89.645	Maylandia_zebra
ENSGAFG00000010274	-	93	80.980	ENSMGAG00000001883	-	96	81.268	Meleagris_gallopavo
ENSGAFG00000010274	-	99	74.799	ENSMGAG00000006794	-	78	74.799	Meleagris_gallopavo
ENSGAFG00000010274	-	95	95.820	ENSMMOG00000005216	-	97	95.820	Mola_mola
ENSGAFG00000010274	-	95	93.269	ENSMMOG00000000730	pcbp3	88	93.269	Mola_mola
ENSGAFG00000010274	-	69	77.570	ENSMODG00000027884	-	93	77.570	Monodelphis_domestica
ENSGAFG00000010274	-	100	88.034	ENSMALG00000000691	pcbp3	100	88.034	Monopterus_albus
ENSGAFG00000010274	-	93	84.259	ENSMPUG00000001779	-	88	84.259	Mustela_putorius_furo
ENSGAFG00000010274	-	100	87.714	ENSNBRG00000016409	-	100	87.714	Neolamprologus_brichardi
ENSGAFG00000010274	-	100	89.645	ENSNBRG00000016714	-	100	89.645	Neolamprologus_brichardi
ENSGAFG00000010274	-	94	82.235	ENSOPRG00000003431	-	99	82.235	Ochotona_princeps
ENSGAFG00000010274	-	95	98.392	ENSONIG00000004611	-	97	98.392	Oreochromis_niloticus
ENSGAFG00000010274	-	95	84.703	ENSONIG00000012122	-	98	84.703	Oreochromis_niloticus
ENSGAFG00000010274	-	93	96.382	ENSOCUG00000002696	-	87	96.382	Oryctolagus_cuniculus
ENSGAFG00000010274	-	99	98.466	ENSORLG00000022739	-	99	98.466	Oryzias_latipes
ENSGAFG00000010274	-	95	97.097	ENSORLG00000000059	pcbp3	100	97.097	Oryzias_latipes
ENSGAFG00000010274	-	99	98.160	ENSORLG00020006124	-	99	98.160	Oryzias_latipes_hni
ENSGAFG00000010274	-	95	97.097	ENSORLG00020012671	pcbp3	97	97.097	Oryzias_latipes_hni
ENSGAFG00000010274	-	99	98.466	ENSORLG00015008051	-	99	98.466	Oryzias_latipes_hsok
ENSGAFG00000010274	-	95	97.097	ENSORLG00015000429	pcbp3	97	97.097	Oryzias_latipes_hsok
ENSGAFG00000010274	-	90	96.085	ENSOMEG00000020811	pcbp3	97	96.085	Oryzias_melastigma
ENSGAFG00000010274	-	95	98.392	ENSOMEG00000020162	-	97	98.392	Oryzias_melastigma
ENSGAFG00000010274	-	93	83.429	ENSOGAG00000008044	-	96	83.429	Otolemur_garnettii
ENSGAFG00000010274	-	77	84.211	ENSPKIG00000020913	-	82	84.211	Paramormyrops_kingsleyae
ENSGAFG00000010274	-	100	97.554	ENSPKIG00000019329	pcbp3	100	97.554	Paramormyrops_kingsleyae
ENSGAFG00000010274	-	94	82.515	ENSPSIG00000014970	-	97	83.129	Pelodiscus_sinensis
ENSGAFG00000010274	-	94	77.395	ENSPSIG00000008350	-	72	77.395	Pelodiscus_sinensis
ENSGAFG00000010274	-	100	90.286	ENSPMGG00000022383	pcbp3	100	90.286	Periophthalmus_magnuspinnatus
ENSGAFG00000010274	-	94	74.204	ENSPMAG00000004551	pcbp3	90	74.204	Petromyzon_marinus
ENSGAFG00000010274	-	76	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSGAFG00000010274	-	93	90.214	ENSPCIG00000028092	-	96	91.705	Phascolarctos_cinereus
ENSGAFG00000010274	-	94	92.188	ENSPLAG00000004074	-	89	92.188	Poecilia_latipinna
ENSGAFG00000010274	-	100	76.000	ENSPLAG00000011449	pcbp3	100	76.000	Poecilia_latipinna
ENSGAFG00000010274	-	100	89.548	ENSPMEG00000021239	pcbp3	100	89.548	Poecilia_mexicana
ENSGAFG00000010274	-	100	90.000	ENSPMEG00000006653	-	100	90.000	Poecilia_mexicana
ENSGAFG00000010274	-	95	92.308	ENSPREG00000015736	pcbp3	99	92.308	Poecilia_reticulata
ENSGAFG00000010274	-	95	96.463	ENSPREG00000020585	-	94	99.522	Poecilia_reticulata
ENSGAFG00000010274	-	95	94.194	ENSPNYG00000012326	pcbp3	95	94.194	Pundamilia_nyererei
ENSGAFG00000010274	-	95	95.820	ENSPNYG00000013205	-	97	95.820	Pundamilia_nyererei
ENSGAFG00000010274	-	95	98.071	ENSPNAG00000015104	pcbp3	97	98.071	Pygocentrus_nattereri
ENSGAFG00000010274	-	100	88.319	ENSPNAG00000008541	-	98	92.857	Pygocentrus_nattereri
ENSGAFG00000010274	-	93	97.039	ENSRNOG00000001245	Pcbp3	95	97.039	Rattus_norvegicus
ENSGAFG00000010274	-	93	85.127	ENSRBIG00000028177	-	87	85.127	Rhinopithecus_bieti
ENSGAFG00000010274	-	93	90.741	ENSSHAG00000007890	-	96	90.741	Sarcophilus_harrisii
ENSGAFG00000010274	-	100	98.165	ENSSFOG00015010205	pcbp3	100	98.165	Scleropages_formosus
ENSGAFG00000010274	-	100	89.714	ENSSFOG00015014706	pcbp3	100	89.714	Scleropages_formosus
ENSGAFG00000010274	-	92	85.099	ENSSFOG00015007118	-	93	85.099	Scleropages_formosus
ENSGAFG00000010274	-	100	98.471	ENSSMAG00000003135	-	100	98.471	Scophthalmus_maximus
ENSGAFG00000010274	-	95	94.516	ENSSMAG00000011929	pcbp3	97	94.516	Scophthalmus_maximus
ENSGAFG00000010274	-	100	93.030	ENSSDUG00000008502	-	100	93.030	Seriola_dumerili
ENSGAFG00000010274	-	95	87.164	ENSSDUG00000011608	pcbp3	99	87.164	Seriola_dumerili
ENSGAFG00000010274	-	95	87.164	ENSSLDG00000008518	pcbp3	99	87.164	Seriola_lalandi_dorsalis
ENSGAFG00000010274	-	100	99.388	ENSSLDG00000020161	-	100	99.388	Seriola_lalandi_dorsalis
ENSGAFG00000010274	-	98	74.105	ENSSPUG00000013214	-	90	84.080	Sphenodon_punctatus
ENSGAFG00000010274	-	100	78.000	ENSSPAG00000023341	-	100	78.000	Stegastes_partitus
ENSGAFG00000010274	-	91	94.700	ENSSPAG00000004190	-	97	94.700	Stegastes_partitus
ENSGAFG00000010274	-	93	87.654	ENSTGUG00000003316	-	96	87.654	Taeniopygia_guttata
ENSGAFG00000010274	-	93	90.132	ENSTGUG00000008158	-	96	90.132	Taeniopygia_guttata
ENSGAFG00000010274	-	100	91.765	ENSTRUG00000013604	pcbp3	100	91.765	Takifugu_rubripes
ENSGAFG00000010274	-	91	98.921	ENSTRUG00000006280	-	89	98.921	Takifugu_rubripes
ENSGAFG00000010274	-	93	83.862	ENSTTRG00000015075	-	96	83.862	Tursiops_truncatus
ENSGAFG00000010274	-	93	74.221	ENSXETG00000010491	pcbp2	77	74.221	Xenopus_tropicalis
ENSGAFG00000010274	-	93	89.198	ENSXETG00000011483	pcbp1	96	89.198	Xenopus_tropicalis
ENSGAFG00000010274	-	100	89.548	ENSXCOG00000020481	pcbp3	100	89.548	Xiphophorus_couchianus
ENSGAFG00000010274	-	100	99.694	ENSXMAG00000028711	-	100	99.694	Xiphophorus_maculatus
ENSGAFG00000010274	-	100	90.341	ENSXMAG00000008175	pcbp3	100	90.341	Xiphophorus_maculatus