EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000010337 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 14423 bases
Position: chrNHOQ01001971.1:8810434-8824856
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015318	RRM_4	PF10598.9	3e-48	1	1
ENSGAFP00000015318	U5_2-snRNA_bdg	PF10597.9	7.2e-74	1	1
ENSGAFP00000015318	PRO8NT	PF08082.11	2.2e-87	1	1
ENSGAFP00000015318	U6-snRNA_bdg	PF10596.9	1.8e-89	1	1
ENSGAFP00000015318	PROCN	PF08083.11	1.4e-233	1	1
ENSGAFP00000015318	PRP8_domainIV	PF12134.8	4.2e-130	1	1
ENSGAFP00000015318	PROCT	PF08084.11	2.8e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015467	-	7041	-	ENSGAFP00000015318	2346 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010337	prpf8	99	97.520	ENSG00000174231	PRPF8	99	97.520	Homo_sapiens
ENSGAFG00000010337	prpf8	99	98.803	ENSAPOG00000010079	prpf8	99	98.803	Acanthochromis_polyacanthus
ENSGAFG00000010337	prpf8	99	97.520	ENSAMEG00000007940	PRPF8	99	97.520	Ailuropoda_melanoleuca
ENSGAFG00000010337	prpf8	99	97.402	ENSACIG00000018280	prpf8	99	97.402	Amphilophus_citrinellus
ENSGAFG00000010337	prpf8	99	98.846	ENSAOCG00000010725	prpf8	99	98.846	Amphiprion_ocellaris
ENSGAFG00000010337	prpf8	99	98.846	ENSAPEG00000014397	prpf8	99	98.846	Amphiprion_percula
ENSGAFG00000010337	prpf8	99	98.498	ENSATEG00000010062	prpf8	99	98.498	Anabas_testudineus
ENSGAFG00000010337	prpf8	96	97.954	ENSAPLG00000010357	PRPF8	100	97.954	Anas_platyrhynchos
ENSGAFG00000010337	prpf8	83	95.750	ENSACAG00000014784	PRPF8	100	95.750	Anolis_carolinensis
ENSGAFG00000010337	prpf8	99	97.520	ENSANAG00000032629	PRPF8	99	97.520	Aotus_nancymaae
ENSGAFG00000010337	prpf8	99	98.676	ENSACLG00000020858	prpf8	99	99.001	Astatotilapia_calliptera
ENSGAFG00000010337	prpf8	99	98.838	ENSAMXG00000020291	prpf8	99	98.838	Astyanax_mexicanus
ENSGAFG00000010337	prpf8	99	97.520	ENSBTAG00000011488	PRPF8	99	97.520	Bos_taurus
ENSGAFG00000010337	prpf8	99	86.489	WBGene00004187	prp-8	99	86.595	Caenorhabditis_elegans
ENSGAFG00000010337	prpf8	99	97.520	ENSCJAG00000001911	PRPF8	99	97.520	Callithrix_jacchus
ENSGAFG00000010337	prpf8	99	97.520	ENSCAFG00000019221	PRPF8	99	97.520	Canis_familiaris
ENSGAFG00000010337	prpf8	96	98.037	ENSCAFG00020009943	PRPF8	100	98.037	Canis_lupus_dingo
ENSGAFG00000010337	prpf8	99	97.520	ENSCHIG00000017499	PRPF8	99	97.520	Capra_hircus
ENSGAFG00000010337	prpf8	99	97.520	ENSTSYG00000014120	PRPF8	99	97.520	Carlito_syrichta
ENSGAFG00000010337	prpf8	96	95.813	ENSCAPG00000009459	PRPF8	99	95.813	Cavia_aperea
ENSGAFG00000010337	prpf8	99	97.520	ENSCPOG00000010379	PRPF8	99	97.520	Cavia_porcellus
ENSGAFG00000010337	prpf8	99	97.520	ENSCCAG00000031983	-	99	97.520	Cebus_capucinus
ENSGAFG00000010337	prpf8	99	97.520	ENSCATG00000038595	PRPF8	99	97.520	Cercocebus_atys
ENSGAFG00000010337	prpf8	99	97.520	ENSCLAG00000004388	PRPF8	99	97.520	Chinchilla_lanigera
ENSGAFG00000010337	prpf8	99	97.520	ENSCSAG00000013929	PRPF8	99	97.520	Chlorocebus_sabaeus
ENSGAFG00000010337	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	87	97.333	Choloepus_hoffmanni
ENSGAFG00000010337	prpf8	99	97.685	ENSCPBG00000020409	PRPF8	99	97.685	Chrysemys_picta_bellii
ENSGAFG00000010337	prpf8	98	92.518	ENSCSAVG00000007825	-	100	91.237	Ciona_savignyi
ENSGAFG00000010337	prpf8	99	97.520	ENSCANG00000043088	PRPF8	99	97.520	Colobus_angolensis_palliatus
ENSGAFG00000010337	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSGAFG00000010337	prpf8	99	99.013	ENSCSEG00000007905	prpf8	99	99.013	Cynoglossus_semilaevis
ENSGAFG00000010337	prpf8	99	98.375	ENSDARG00000026180	prpf8	99	98.375	Danio_rerio
ENSGAFG00000010337	prpf8	93	97.524	ENSDNOG00000018471	PRPF8	99	97.524	Dasypus_novemcinctus
ENSGAFG00000010337	prpf8	84	96.249	ENSDORG00000006185	Prpf8	96	96.249	Dipodomys_ordii
ENSGAFG00000010337	prpf8	99	91.115	FBgn0033688	Prp8	97	91.677	Drosophila_melanogaster
ENSGAFG00000010337	prpf8	99	92.133	ENSETEG00000017592	PRPF8	99	92.133	Echinops_telfairi
ENSGAFG00000010337	prpf8	99	93.353	ENSEBUG00000006548	prpf8	99	93.353	Eptatretus_burgeri
ENSGAFG00000010337	prpf8	99	97.520	ENSEASG00005009514	PRPF8	99	98.439	Equus_asinus_asinus
ENSGAFG00000010337	prpf8	97	98.066	ENSECAG00000021318	PRPF8	100	98.066	Equus_caballus
ENSGAFG00000010337	prpf8	67	98.519	ENSEEUG00000012120	-	66	98.519	Erinaceus_europaeus
ENSGAFG00000010337	prpf8	97	97.413	ENSELUG00000007120	prpf8	99	97.413	Esox_lucius
ENSGAFG00000010337	prpf8	99	97.520	ENSFCAG00000006297	PRPF8	99	97.520	Felis_catus
ENSGAFG00000010337	prpf8	99	97.851	ENSFALG00000006628	PRPF8	99	97.851	Ficedula_albicollis
ENSGAFG00000010337	prpf8	99	97.520	ENSFDAG00000004711	PRPF8	99	97.520	Fukomys_damarensis
ENSGAFG00000010337	prpf8	99	99.186	ENSFHEG00000021084	prpf8	99	99.186	Fundulus_heteroclitus
ENSGAFG00000010337	prpf8	99	96.648	ENSGMOG00000002028	prpf8	99	96.648	Gadus_morhua
ENSGAFG00000010337	prpf8	99	97.851	ENSGALG00000002943	PRPF8	99	97.851	Gallus_gallus
ENSGAFG00000010337	prpf8	99	98.927	ENSGACG00000008504	prpf8	100	98.339	Gasterosteus_aculeatus
ENSGAFG00000010337	prpf8	99	97.728	ENSGAGG00000008350	PRPF8	99	97.728	Gopherus_agassizii
ENSGAFG00000010337	prpf8	99	97.520	ENSGGOG00000005516	PRPF8	99	97.520	Gorilla_gorilla
ENSGAFG00000010337	prpf8	99	98.247	ENSHBUG00000016192	prpf8	99	98.247	Haplochromis_burtoni
ENSGAFG00000010337	prpf8	99	97.520	ENSHGLG00000012029	PRPF8	99	97.520	Heterocephalus_glaber_female
ENSGAFG00000010337	prpf8	99	97.520	ENSHGLG00100016494	PRPF8	99	97.520	Heterocephalus_glaber_male
ENSGAFG00000010337	prpf8	99	98.842	ENSHCOG00000016414	prpf8	99	98.842	Hippocampus_comes
ENSGAFG00000010337	prpf8	99	98.498	ENSIPUG00000023230	prpf8	99	98.498	Ictalurus_punctatus
ENSGAFG00000010337	prpf8	99	97.520	ENSSTOG00000005128	PRPF8	99	97.520	Ictidomys_tridecemlineatus
ENSGAFG00000010337	prpf8	99	95.383	ENSJJAG00000021159	Prpf8	99	95.383	Jaculus_jaculus
ENSGAFG00000010337	prpf8	99	98.890	ENSKMAG00000016118	prpf8	100	98.890	Kryptolebias_marmoratus
ENSGAFG00000010337	prpf8	99	98.970	ENSLBEG00000026903	prpf8	99	98.970	Labrus_bergylta
ENSGAFG00000010337	prpf8	94	95.824	ENSLACG00000010479	PRPF8	99	98.309	Latimeria_chalumnae
ENSGAFG00000010337	prpf8	99	98.200	ENSLOCG00000005409	prpf8	99	98.200	Lepisosteus_oculatus
ENSGAFG00000010337	prpf8	99	97.520	ENSLAFG00000015445	PRPF8	99	97.520	Loxodonta_africana
ENSGAFG00000010337	prpf8	99	97.520	ENSMFAG00000039995	PRPF8	99	97.520	Macaca_fascicularis
ENSGAFG00000010337	prpf8	99	97.520	ENSMMUG00000004820	PRPF8	99	97.520	Macaca_mulatta
ENSGAFG00000010337	prpf8	99	97.520	ENSMNEG00000035713	PRPF8	99	97.520	Macaca_nemestrina
ENSGAFG00000010337	prpf8	99	97.520	ENSMLEG00000037937	PRPF8	99	97.520	Mandrillus_leucophaeus
ENSGAFG00000010337	prpf8	99	99.099	ENSMAMG00000008919	prpf8	99	99.099	Mastacembelus_armatus
ENSGAFG00000010337	prpf8	99	98.676	ENSMZEG00005015073	prpf8	99	98.676	Maylandia_zebra
ENSGAFG00000010337	prpf8	99	97.851	ENSMGAG00000004769	PRPF8	99	97.851	Meleagris_gallopavo
ENSGAFG00000010337	prpf8	99	97.520	ENSMICG00000010320	PRPF8	99	97.520	Microcebus_murinus
ENSGAFG00000010337	prpf8	99	97.520	ENSMOCG00000016838	Prpf8	99	97.520	Microtus_ochrogaster
ENSGAFG00000010337	prpf8	99	98.584	ENSMMOG00000011887	prpf8	99	98.584	Mola_mola
ENSGAFG00000010337	prpf8	99	97.435	ENSMODG00000010480	PRPF8	99	97.435	Monodelphis_domestica
ENSGAFG00000010337	prpf8	97	98.536	ENSMALG00000003558	prpf8	99	98.536	Monopterus_albus
ENSGAFG00000010337	prpf8	99	97.478	MGP_CAROLIEiJ_G0016740	Prpf8	99	97.478	Mus_caroli
ENSGAFG00000010337	prpf8	99	97.478	ENSMUSG00000020850	Prpf8	99	97.478	Mus_musculus
ENSGAFG00000010337	prpf8	99	97.435	MGP_PahariEiJ_G0017877	Prpf8	99	97.435	Mus_pahari
ENSGAFG00000010337	prpf8	99	97.478	MGP_SPRETEiJ_G0017583	Prpf8	99	97.478	Mus_spretus
ENSGAFG00000010337	prpf8	99	97.520	ENSMPUG00000013227	PRPF8	99	97.520	Mustela_putorius_furo
ENSGAFG00000010337	prpf8	99	97.395	ENSMLUG00000002666	PRPF8	99	97.395	Myotis_lucifugus
ENSGAFG00000010337	prpf8	99	95.767	ENSNGAG00000005305	Prpf8	99	95.767	Nannospalax_galili
ENSGAFG00000010337	prpf8	99	98.719	ENSNBRG00000013127	prpf8	99	98.719	Neolamprologus_brichardi
ENSGAFG00000010337	prpf8	97	96.756	ENSNLEG00000000897	PRPF8	98	96.756	Nomascus_leucogenys
ENSGAFG00000010337	prpf8	98	96.176	ENSMEUG00000015999	PRPF8	100	96.176	Notamacropus_eugenii
ENSGAFG00000010337	prpf8	99	96.024	ENSOPRG00000003102	PRPF8	99	96.547	Ochotona_princeps
ENSGAFG00000010337	prpf8	99	97.520	ENSODEG00000008468	PRPF8	99	97.520	Octodon_degus
ENSGAFG00000010337	prpf8	99	98.677	ENSONIG00000008153	prpf8	99	98.677	Oreochromis_niloticus
ENSGAFG00000010337	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSGAFG00000010337	prpf8	99	97.520	ENSOCUG00000000081	PRPF8	99	97.520	Oryctolagus_cuniculus
ENSGAFG00000010337	prpf8	99	98.977	ENSORLG00000008036	prpf8	99	98.977	Oryzias_latipes
ENSGAFG00000010337	prpf8	99	98.935	ENSORLG00020021070	prpf8	99	98.935	Oryzias_latipes_hni
ENSGAFG00000010337	prpf8	99	98.977	ENSORLG00015002340	prpf8	99	98.977	Oryzias_latipes_hsok
ENSGAFG00000010337	prpf8	99	97.357	ENSOMEG00000016866	prpf8	99	97.357	Oryzias_melastigma
ENSGAFG00000010337	prpf8	99	97.395	ENSOARG00000013312	PRPF8	99	97.395	Ovis_aries
ENSGAFG00000010337	prpf8	99	97.520	ENSPPAG00000042753	PRPF8	99	97.520	Pan_paniscus
ENSGAFG00000010337	prpf8	99	97.520	ENSPPRG00000008746	PRPF8	99	97.520	Panthera_pardus
ENSGAFG00000010337	prpf8	99	97.435	ENSPTIG00000019200	PRPF8	99	97.435	Panthera_tigris_altaica
ENSGAFG00000010337	prpf8	99	97.520	ENSPTRG00000039576	PRPF8	99	97.520	Pan_troglodytes
ENSGAFG00000010337	prpf8	98	98.089	ENSPANG00000024607	PRPF8	98	98.089	Papio_anubis
ENSGAFG00000010337	prpf8	99	98.375	ENSPKIG00000011201	prpf8	99	98.375	Paramormyrops_kingsleyae
ENSGAFG00000010337	prpf8	99	97.643	ENSPSIG00000013393	PRPF8	99	97.643	Pelodiscus_sinensis
ENSGAFG00000010337	prpf8	99	97.520	ENSPEMG00000021699	Prpf8	99	97.520	Peromyscus_maniculatus_bairdii
ENSGAFG00000010337	prpf8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSGAFG00000010337	prpf8	99	97.435	ENSPCIG00000022603	PRPF8	100	97.947	Phascolarctos_cinereus
ENSGAFG00000010337	prpf8	100	99.702	ENSPFOG00000007005	prpf8	99	99.702	Poecilia_formosa
ENSGAFG00000010337	prpf8	99	98.069	ENSPLAG00000020777	prpf8	99	98.069	Poecilia_latipinna
ENSGAFG00000010337	prpf8	100	99.702	ENSPMEG00000004051	prpf8	99	99.702	Poecilia_mexicana
ENSGAFG00000010337	prpf8	100	99.702	ENSPREG00000021902	prpf8	99	99.702	Poecilia_reticulata
ENSGAFG00000010337	prpf8	99	97.520	ENSPPYG00000007777	PRPF8	99	97.520	Pongo_abelii
ENSGAFG00000010337	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	89	96.635	Procavia_capensis
ENSGAFG00000010337	prpf8	99	97.520	ENSPCOG00000015182	PRPF8	99	97.520	Propithecus_coquereli
ENSGAFG00000010337	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSGAFG00000010337	prpf8	99	98.247	ENSPNYG00000016356	prpf8	99	98.247	Pundamilia_nyererei
ENSGAFG00000010337	prpf8	99	98.670	ENSPNAG00000009247	prpf8	99	98.670	Pygocentrus_nattereri
ENSGAFG00000010337	prpf8	99	97.478	ENSRNOG00000003495	Prpf8	99	97.478	Rattus_norvegicus
ENSGAFG00000010337	prpf8	99	97.520	ENSRBIG00000031219	PRPF8	100	97.590	Rhinopithecus_bieti
ENSGAFG00000010337	prpf8	99	97.520	ENSRROG00000038014	PRPF8	100	97.590	Rhinopithecus_roxellana
ENSGAFG00000010337	prpf8	98	62.430	YHR165C	PRP8	95	62.473	Saccharomyces_cerevisiae
ENSGAFG00000010337	prpf8	99	97.520	ENSSBOG00000029717	PRPF8	99	97.520	Saimiri_boliviensis_boliviensis
ENSGAFG00000010337	prpf8	99	97.392	ENSSHAG00000006167	PRPF8	99	97.392	Sarcophilus_harrisii
ENSGAFG00000010337	prpf8	100	98.210	ENSSFOG00015013905	prpf8	100	98.210	Scleropages_formosus
ENSGAFG00000010337	prpf8	99	98.715	ENSSMAG00000017736	prpf8	99	98.715	Scophthalmus_maximus
ENSGAFG00000010337	prpf8	99	99.015	ENSSDUG00000003029	prpf8	99	99.015	Seriola_dumerili
ENSGAFG00000010337	prpf8	68	99.687	ENSSLDG00000017096	prpf8	100	99.687	Seriola_lalandi_dorsalis
ENSGAFG00000010337	prpf8	87	94.336	ENSSARG00000002892	PRPF8	87	94.336	Sorex_araneus
ENSGAFG00000010337	prpf8	99	97.606	ENSSPUG00000007463	PRPF8	99	97.606	Sphenodon_punctatus
ENSGAFG00000010337	prpf8	99	98.204	ENSSPAG00000015639	prpf8	99	98.204	Stegastes_partitus
ENSGAFG00000010337	prpf8	99	97.520	ENSSSCG00000017817	PRPF8	99	97.520	Sus_scrofa
ENSGAFG00000010337	prpf8	99	97.851	ENSTGUG00000005648	-	99	97.851	Taeniopygia_guttata
ENSGAFG00000010337	prpf8	51	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSGAFG00000010337	prpf8	99	98.415	ENSTRUG00000015906	prpf8	99	98.415	Takifugu_rubripes
ENSGAFG00000010337	prpf8	94	99.343	ENSTNIG00000003460	prpf8	99	99.343	Tetraodon_nigroviridis
ENSGAFG00000010337	prpf8	88	98.911	ENSTBEG00000006431	PRPF8	89	98.911	Tupaia_belangeri
ENSGAFG00000010337	prpf8	99	96.922	ENSTTRG00000006869	PRPF8	99	96.922	Tursiops_truncatus
ENSGAFG00000010337	prpf8	54	96.358	ENSUAMG00000015644	-	95	96.358	Ursus_americanus
ENSGAFG00000010337	prpf8	99	97.264	ENSUMAG00000009385	PRPF8	99	97.264	Ursus_maritimus
ENSGAFG00000010337	prpf8	71	97.561	ENSVPAG00000006063	-	70	97.561	Vicugna_pacos
ENSGAFG00000010337	prpf8	99	97.436	ENSVVUG00000021695	PRPF8	99	97.436	Vulpes_vulpes
ENSGAFG00000010337	prpf8	99	97.472	ENSXETG00000022259	prpf8	99	97.472	Xenopus_tropicalis
ENSGAFG00000010337	prpf8	99	99.360	ENSXCOG00000012775	prpf8	99	99.360	Xiphophorus_couchianus
ENSGAFG00000010337	prpf8	99	99.317	ENSXMAG00000008505	prpf8	99	99.317	Xiphophorus_maculatus