EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010524 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3763 bases
Position: chrNHOQ01001548.1:589268-593030
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000015574	zf-C2H2	PF00096.26	1.2e-21	1	3
ENSGAFP00000015574	zf-C2H2	PF00096.26	1.2e-21	2	3
ENSGAFP00000015574	zf-C2H2	PF00096.26	1.2e-21	3	3
ENSGAFP00000015574	zf-met	PF12874.7	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000015725	-	1983	-	ENSGAFP00000015574	270 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010524	-	72	55.172	ENSGAFG00000016595	-	97	55.172
ENSGAFG00000010524	-	87	60.526	ENSGAFG00000011288	-	100	60.526
ENSGAFG00000010524	-	70	56.897	ENSGAFG00000019072	-	98	56.897
ENSGAFG00000010524	-	68	59.551	ENSGAFG00000011965	-	86	59.551
ENSGAFG00000010524	-	69	59.483	ENSGAFG00000011884	-	95	59.483
ENSGAFG00000010524	-	87	58.621	ENSGAFG00000008231	-	87	58.621
ENSGAFG00000010524	-	71	50.893	ENSGAFG00000014088	-	87	50.893
ENSGAFG00000010524	-	99	62.185	ENSGAFG00000011326	-	99	63.158
ENSGAFG00000010524	-	79	50.562	ENSGAFG00000013452	-	92	50.562
ENSGAFG00000010524	-	76	52.586	ENSGAFG00000013677	-	99	52.586
ENSGAFG00000010524	-	87	59.483	ENSGAFG00000007104	-	77	59.483
ENSGAFG00000010524	-	99	59.483	ENSGAFG00000013934	-	98	61.538
ENSGAFG00000010524	-	77	55.357	ENSGAFG00000011940	-	90	55.357
ENSGAFG00000010524	-	85	52.885	ENSGAFG00000011998	-	64	52.885
ENSGAFG00000010524	-	72	56.140	ENSGAFG00000011999	-	96	56.140
ENSGAFG00000010524	-	72	48.276	ENSGAFG00000001879	-	96	48.276
ENSGAFG00000010524	-	87	51.754	ENSGAFG00000018663	-	96	51.685
ENSGAFG00000010524	-	100	55.172	ENSGAFG00000008274	-	98	55.172
ENSGAFG00000010524	-	99	58.261	ENSGAFG00000008204	-	99	58.261
ENSGAFG00000010524	-	82	50.000	ENSGAFG00000014563	-	97	50.000
ENSGAFG00000010524	-	86	51.754	ENSGAFG00000019035	-	58	51.754
ENSGAFG00000010524	-	100	53.448	ENSGAFG00000010983	-	97	53.448
ENSGAFG00000010524	-	100	52.991	ENSGAFG00000020501	-	98	52.991
ENSGAFG00000010524	-	100	40.741	ENSGAFG00000020507	-	98	42.982
ENSGAFG00000010524	-	87	58.621	ENSGAFG00000020505	-	64	58.621
ENSGAFG00000010524	-	100	50.877	ENSGAFG00000018422	-	95	50.877
ENSGAFG00000010524	-	99	59.483	ENSGAFG00000016976	-	100	59.483
ENSGAFG00000010524	-	99	56.034	ENSGAFG00000008226	-	99	56.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010524	-	79	55.556	ENSACIG00000000286	-	85	55.556	Amphilophus_citrinellus
ENSGAFG00000010524	-	72	56.897	ENSACIG00000017050	-	99	56.034	Amphilophus_citrinellus
ENSGAFG00000010524	-	99	48.276	ENSAPEG00000005566	-	98	48.276	Amphiprion_percula
ENSGAFG00000010524	-	88	45.455	ENSATEG00000011221	-	59	45.455	Anabas_testudineus
ENSGAFG00000010524	-	99	52.577	ENSATEG00000008771	-	91	52.577	Anabas_testudineus
ENSGAFG00000010524	-	81	56.897	ENSACLG00000011237	-	97	56.897	Astatotilapia_calliptera
ENSGAFG00000010524	-	71	47.191	ENSCSEG00000020696	-	97	55.172	Cynoglossus_semilaevis
ENSGAFG00000010524	-	73	40.351	ENSCVAG00000019705	-	88	40.351	Cyprinodon_variegatus
ENSGAFG00000010524	-	87	59.770	ENSCVAG00000016906	-	65	59.770	Cyprinodon_variegatus
ENSGAFG00000010524	-	76	57.759	ENSCVAG00000022991	-	99	59.483	Cyprinodon_variegatus
ENSGAFG00000010524	-	99	56.897	ENSCVAG00000007073	-	93	56.897	Cyprinodon_variegatus
ENSGAFG00000010524	-	69	56.522	ENSCVAG00000021107	-	97	56.522	Cyprinodon_variegatus
ENSGAFG00000010524	-	99	53.846	ENSCVAG00000006659	-	98	53.846	Cyprinodon_variegatus
ENSGAFG00000010524	-	71	55.172	ENSELUG00000013245	-	95	55.172	Esox_lucius
ENSGAFG00000010524	-	79	47.826	ENSFHEG00000016692	-	95	47.826	Fundulus_heteroclitus
ENSGAFG00000010524	-	70	49.138	ENSFHEG00000016663	-	72	49.138	Fundulus_heteroclitus
ENSGAFG00000010524	-	79	48.276	ENSFHEG00000016718	-	82	48.276	Fundulus_heteroclitus
ENSGAFG00000010524	-	69	59.483	ENSGACG00000005239	-	99	59.483	Gasterosteus_aculeatus
ENSGAFG00000010524	-	83	55.652	ENSHBUG00000006977	-	78	55.652	Haplochromis_burtoni
ENSGAFG00000010524	-	99	53.608	ENSHCOG00000001942	-	100	53.608	Hippocampus_comes
ENSGAFG00000010524	-	73	52.137	ENSHCOG00000012617	-	98	52.137	Hippocampus_comes
ENSGAFG00000010524	-	99	50.000	ENSHCOG00000008234	-	98	50.000	Hippocampus_comes
ENSGAFG00000010524	-	91	54.217	ENSHCOG00000015463	-	97	54.217	Hippocampus_comes
ENSGAFG00000010524	-	70	57.265	ENSHCOG00000001338	-	88	57.265	Hippocampus_comes
ENSGAFG00000010524	-	91	52.586	ENSHCOG00000015414	-	96	52.586	Hippocampus_comes
ENSGAFG00000010524	-	76	47.917	ENSKMAG00000007672	-	98	47.917	Kryptolebias_marmoratus
ENSGAFG00000010524	-	68	51.724	ENSMZEG00005025726	-	98	51.724	Maylandia_zebra
ENSGAFG00000010524	-	80	54.310	ENSMALG00000012043	-	96	55.172	Monopterus_albus
ENSGAFG00000010524	-	99	50.000	ENSONIG00000016734	-	99	50.000	Oreochromis_niloticus
ENSGAFG00000010524	-	71	59.483	ENSORLG00000024174	-	92	59.483	Oryzias_latipes
ENSGAFG00000010524	-	56	63.889	ENSORLG00015011871	-	98	59.483	Oryzias_latipes_hsok
ENSGAFG00000010524	-	98	54.783	ENSPMGG00000001270	-	84	54.783	Periophthalmus_magnuspinnatus
ENSGAFG00000010524	-	99	54.310	ENSPMGG00000000636	-	93	54.310	Periophthalmus_magnuspinnatus
ENSGAFG00000010524	-	70	46.154	ENSPMGG00000001543	-	89	52.542	Periophthalmus_magnuspinnatus
ENSGAFG00000010524	-	73	54.701	ENSPMGG00000010453	-	99	54.310	Periophthalmus_magnuspinnatus
ENSGAFG00000010524	-	87	60.526	ENSPFOG00000007919	-	100	61.538	Poecilia_formosa
ENSGAFG00000010524	-	84	59.130	ENSPFOG00000001339	-	100	59.483	Poecilia_formosa
ENSGAFG00000010524	-	99	51.724	ENSPNYG00000018372	-	99	51.724	Pundamilia_nyererei
ENSGAFG00000010524	-	99	53.571	ENSPNYG00000000700	-	100	53.571	Pundamilia_nyererei
ENSGAFG00000010524	-	76	60.345	ENSPNYG00000018920	-	99	60.345	Pundamilia_nyererei
ENSGAFG00000010524	-	87	56.364	ENSSMAG00000015347	-	99	56.364	Scophthalmus_maximus
ENSGAFG00000010524	-	77	36.842	ENSSDUG00000004867	-	96	57.971	Seriola_dumerili
ENSGAFG00000010524	-	76	56.897	ENSSDUG00000007336	-	100	56.897	Seriola_dumerili
ENSGAFG00000010524	-	99	54.783	ENSSDUG00000009425	-	99	54.783	Seriola_dumerili
ENSGAFG00000010524	-	81	49.138	ENSSPAG00000005739	-	61	49.138	Stegastes_partitus
ENSGAFG00000010524	-	72	42.500	ENSXCOG00000009777	-	78	42.500	Xiphophorus_couchianus
ENSGAFG00000010524	-	81	56.140	ENSXCOG00000007957	-	97	59.483	Xiphophorus_couchianus
ENSGAFG00000010524	-	69	52.174	ENSXCOG00000007406	-	98	52.586	Xiphophorus_couchianus
ENSGAFG00000010524	-	99	51.304	ENSXCOG00000001200	-	99	51.724	Xiphophorus_couchianus
ENSGAFG00000010524	-	72	42.500	ENSXMAG00000021759	-	78	42.500	Xiphophorus_maculatus
ENSGAFG00000010524	-	70	63.793	ENSXMAG00000026679	-	100	62.069	Xiphophorus_maculatus
ENSGAFG00000010524	-	64	60.870	ENSXMAG00000027906	-	99	60.870	Xiphophorus_maculatus
ENSGAFG00000010524	-	99	50.794	ENSXMAG00000027742	-	99	50.794	Xiphophorus_maculatus
ENSGAFG00000010524	-	69	58.621	ENSXMAG00000020039	-	97	58.621	Xiphophorus_maculatus