EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010807 (Gene tree)
Gene ID: -
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 15277 bases
Position: chrNHOQ01002094.1:5868020-5883296
Accession: ZDB-GENE-081105-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016002	ResIII	PF04851.15	2.7e-16	1	1
ENSGAFP00000016002	DEAD	PF00270.29	1.4e-36	1	2
ENSGAFP00000016002	DEAD	PF00270.29	1.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000016158	-	6255	-	ENSGAFP00000016002	2084 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010807	snrnp200	65	30.917	ENSGAFG00000018093	hfm1	77	30.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010807	snrnp200	99	88.015	ENSG00000144028	SNRNP200	99	89.608	Homo_sapiens
ENSGAFG00000010807	snrnp200	100	94.944	ENSAPOG00000010223	snrnp200	100	94.944	Acanthochromis_polyacanthus
ENSGAFG00000010807	snrnp200	99	88.062	ENSAMEG00000008996	SNRNP200	100	88.062	Ailuropoda_melanoleuca
ENSGAFG00000010807	snrnp200	97	94.105	ENSACIG00000001764	snrnp200	98	94.105	Amphilophus_citrinellus
ENSGAFG00000010807	snrnp200	100	94.757	ENSAOCG00000024593	snrnp200	100	94.757	Amphiprion_ocellaris
ENSGAFG00000010807	snrnp200	97	94.212	ENSAPEG00000012554	snrnp200	100	94.212	Amphiprion_percula
ENSGAFG00000010807	snrnp200	100	94.710	ENSATEG00000022522	snrnp200	100	94.710	Anabas_testudineus
ENSGAFG00000010807	snrnp200	99	88.213	ENSAPLG00000004313	SNRNP200	100	88.213	Anas_platyrhynchos
ENSGAFG00000010807	snrnp200	99	87.078	ENSACAG00000000434	SNRNP200	100	87.078	Anolis_carolinensis
ENSGAFG00000010807	snrnp200	99	84.587	ENSANAG00000036625	SNRNP200	100	84.587	Aotus_nancymaae
ENSGAFG00000010807	snrnp200	100	94.101	ENSACLG00000011188	snrnp200	100	94.101	Astatotilapia_calliptera
ENSGAFG00000010807	snrnp200	99	91.631	ENSAMXG00000005684	snrnp200	100	91.573	Astyanax_mexicanus
ENSGAFG00000010807	snrnp200	99	87.828	ENSBTAG00000000848	SNRNP200	100	87.828	Bos_taurus
ENSGAFG00000010807	snrnp200	99	88.015	ENSCJAG00000007514	SNRNP200	100	88.015	Callithrix_jacchus
ENSGAFG00000010807	snrnp200	99	89.251	ENSCAFG00020019979	SNRNP200	100	89.251	Canis_lupus_dingo
ENSGAFG00000010807	snrnp200	99	87.781	ENSCHIG00000020611	SNRNP200	100	87.781	Capra_hircus
ENSGAFG00000010807	snrnp200	99	88.062	ENSTSYG00000010467	SNRNP200	100	88.062	Carlito_syrichta
ENSGAFG00000010807	snrnp200	99	87.635	ENSCAPG00000017234	SNRNP200	99	87.635	Cavia_aperea
ENSGAFG00000010807	snrnp200	99	87.921	ENSCPOG00000006776	SNRNP200	100	87.921	Cavia_porcellus
ENSGAFG00000010807	snrnp200	99	88.015	ENSCCAG00000033962	SNRNP200	100	88.015	Cebus_capucinus
ENSGAFG00000010807	snrnp200	99	88.015	ENSCATG00000015790	SNRNP200	100	88.015	Cercocebus_atys
ENSGAFG00000010807	snrnp200	99	87.968	ENSCLAG00000004116	SNRNP200	100	87.968	Chinchilla_lanigera
ENSGAFG00000010807	snrnp200	99	88.015	ENSCSAG00000017369	SNRNP200	100	88.015	Chlorocebus_sabaeus
ENSGAFG00000010807	snrnp200	75	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSGAFG00000010807	snrnp200	99	90.451	ENSCPBG00000022571	SNRNP200	100	90.451	Chrysemys_picta_bellii
ENSGAFG00000010807	snrnp200	99	74.148	ENSCING00000005082	-	99	74.242	Ciona_intestinalis
ENSGAFG00000010807	snrnp200	99	82.672	ENSCANG00000033932	SNRNP200	100	87.606	Colobus_angolensis_palliatus
ENSGAFG00000010807	snrnp200	99	88.015	ENSCGRG00001022610	Snrnp200	100	88.015	Cricetulus_griseus_chok1gshd
ENSGAFG00000010807	snrnp200	99	87.518	ENSCGRG00000016472	Snrnp200	100	87.518	Cricetulus_griseus_crigri
ENSGAFG00000010807	snrnp200	99	95.129	ENSCSEG00000016399	snrnp200	100	95.129	Cynoglossus_semilaevis
ENSGAFG00000010807	snrnp200	100	95.585	ENSCVAG00000017631	snrnp200	100	95.585	Cyprinodon_variegatus
ENSGAFG00000010807	snrnp200	100	91.526	ENSDARG00000077536	snrnp200	100	91.526	Danio_rerio
ENSGAFG00000010807	snrnp200	99	86.704	ENSDNOG00000011227	SNRNP200	100	86.704	Dasypus_novemcinctus
ENSGAFG00000010807	snrnp200	99	85.561	ENSDORG00000005861	Snrnp200	100	85.561	Dipodomys_ordii
ENSGAFG00000010807	snrnp200	100	71.801	FBgn0263599	l(3)72Ab	100	71.801	Drosophila_melanogaster
ENSGAFG00000010807	snrnp200	95	87.294	ENSETEG00000000162	SNRNP200	74	87.294	Echinops_telfairi
ENSGAFG00000010807	snrnp200	83	77.668	ENSEBUG00000016524	snrnp200	95	77.668	Eptatretus_burgeri
ENSGAFG00000010807	snrnp200	99	87.040	ENSEASG00005001884	SNRNP200	100	86.946	Equus_asinus_asinus
ENSGAFG00000010807	snrnp200	99	90.259	ENSECAG00000019675	SNRNP200	100	90.259	Equus_caballus
ENSGAFG00000010807	snrnp200	91	96.970	ENSEEUG00000012178	SNRNP200	93	96.970	Erinaceus_europaeus
ENSGAFG00000010807	snrnp200	100	93.074	ENSELUG00000018948	snrnp200	100	93.074	Esox_lucius
ENSGAFG00000010807	snrnp200	99	90.307	ENSFCAG00000010699	SNRNP200	100	90.307	Felis_catus
ENSGAFG00000010807	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSGAFG00000010807	snrnp200	99	87.875	ENSFDAG00000004683	SNRNP200	100	87.875	Fukomys_damarensis
ENSGAFG00000010807	snrnp200	100	98.704	ENSFHEG00000003786	snrnp200	100	98.704	Fundulus_heteroclitus
ENSGAFG00000010807	snrnp200	100	91.963	ENSGMOG00000004881	snrnp200	99	91.822	Gadus_morhua
ENSGAFG00000010807	snrnp200	100	93.975	ENSGACG00000011474	snrnp200	99	93.975	Gasterosteus_aculeatus
ENSGAFG00000010807	snrnp200	95	91.968	ENSGAGG00000016069	SNRNP200	98	96.774	Gopherus_agassizii
ENSGAFG00000010807	snrnp200	99	88.015	ENSGGOG00000005174	SNRNP200	97	92.560	Gorilla_gorilla
ENSGAFG00000010807	snrnp200	97	91.453	ENSHBUG00000011322	snrnp200	99	91.453	Haplochromis_burtoni
ENSGAFG00000010807	snrnp200	99	87.921	ENSHGLG00000006654	SNRNP200	100	87.921	Heterocephalus_glaber_female
ENSGAFG00000010807	snrnp200	99	87.921	ENSHGLG00100018594	SNRNP200	100	87.921	Heterocephalus_glaber_male
ENSGAFG00000010807	snrnp200	99	88.109	ENSSTOG00000016351	SNRNP200	100	88.109	Ictidomys_tridecemlineatus
ENSGAFG00000010807	snrnp200	99	87.828	ENSJJAG00000023659	Snrnp200	100	87.828	Jaculus_jaculus
ENSGAFG00000010807	snrnp200	100	96.987	ENSKMAG00000003665	snrnp200	100	96.987	Kryptolebias_marmoratus
ENSGAFG00000010807	snrnp200	100	94.569	ENSLBEG00000021585	snrnp200	100	94.569	Labrus_bergylta
ENSGAFG00000010807	snrnp200	81	89.456	ENSLACG00000000226	SNRNP200	100	89.456	Latimeria_chalumnae
ENSGAFG00000010807	snrnp200	100	91.160	ENSLOCG00000015198	snrnp200	100	91.160	Lepisosteus_oculatus
ENSGAFG00000010807	snrnp200	99	87.968	ENSLAFG00000015626	SNRNP200	100	87.968	Loxodonta_africana
ENSGAFG00000010807	snrnp200	99	87.968	ENSMFAG00000040174	SNRNP200	99	92.151	Macaca_fascicularis
ENSGAFG00000010807	snrnp200	99	87.968	ENSMMUG00000023261	SNRNP200	100	87.968	Macaca_mulatta
ENSGAFG00000010807	snrnp200	99	87.921	ENSMNEG00000032398	SNRNP200	100	87.921	Macaca_nemestrina
ENSGAFG00000010807	snrnp200	99	88.015	ENSMLEG00000019083	SNRNP200	99	92.151	Mandrillus_leucophaeus
ENSGAFG00000010807	snrnp200	100	94.580	ENSMAMG00000007851	snrnp200	100	94.436	Mastacembelus_armatus
ENSGAFG00000010807	snrnp200	97	91.453	ENSMZEG00005010787	snrnp200	99	91.453	Maylandia_zebra
ENSGAFG00000010807	snrnp200	97	87.857	ENSMGAG00000001831	SNRNP200	99	87.852	Meleagris_gallopavo
ENSGAFG00000010807	snrnp200	99	88.062	ENSMAUG00000011825	Snrnp200	100	88.062	Mesocricetus_auratus
ENSGAFG00000010807	snrnp200	99	88.062	ENSMICG00000004710	SNRNP200	98	91.831	Microcebus_murinus
ENSGAFG00000010807	snrnp200	99	86.236	ENSMOCG00000011814	Snrnp200	100	86.236	Microtus_ochrogaster
ENSGAFG00000010807	snrnp200	99	92.384	ENSMMOG00000014167	snrnp200	100	92.322	Mola_mola
ENSGAFG00000010807	snrnp200	99	88.249	ENSMODG00000008475	SNRNP200	100	88.249	Monodelphis_domestica
ENSGAFG00000010807	snrnp200	100	94.242	ENSMALG00000001973	snrnp200	100	94.242	Monopterus_albus
ENSGAFG00000010807	snrnp200	99	87.921	MGP_CAROLIEiJ_G0024250	Snrnp200	100	87.921	Mus_caroli
ENSGAFG00000010807	snrnp200	99	87.968	ENSMUSG00000003660	Snrnp200	100	87.968	Mus_musculus
ENSGAFG00000010807	snrnp200	99	87.968	MGP_PahariEiJ_G0025695	Snrnp200	100	87.968	Mus_pahari
ENSGAFG00000010807	snrnp200	99	87.968	MGP_SPRETEiJ_G0025170	Snrnp200	100	90.884	Mus_spretus
ENSGAFG00000010807	snrnp200	99	88.109	ENSMPUG00000008949	SNRNP200	100	88.109	Mustela_putorius_furo
ENSGAFG00000010807	snrnp200	99	84.925	ENSMLUG00000027511	-	100	84.925	Myotis_lucifugus
ENSGAFG00000010807	snrnp200	99	87.751	ENSMLUG00000010493	SNRNP200	100	87.751	Myotis_lucifugus
ENSGAFG00000010807	snrnp200	99	88.015	ENSNGAG00000021993	Snrnp200	100	88.015	Nannospalax_galili
ENSGAFG00000010807	snrnp200	90	93.790	ENSNBRG00000017960	snrnp200	98	93.790	Neolamprologus_brichardi
ENSGAFG00000010807	snrnp200	99	83.682	ENSNLEG00000000025	SNRNP200	100	83.775	Nomascus_leucogenys
ENSGAFG00000010807	snrnp200	99	92.784	ENSMEUG00000010532	SNRNP200	79	90.476	Notamacropus_eugenii
ENSGAFG00000010807	snrnp200	96	86.819	ENSOPRG00000015464	SNRNP200	100	84.691	Ochotona_princeps
ENSGAFG00000010807	snrnp200	99	87.968	ENSODEG00000008366	SNRNP200	100	87.968	Octodon_degus
ENSGAFG00000010807	snrnp200	100	94.148	ENSONIG00000010714	snrnp200	100	94.148	Oreochromis_niloticus
ENSGAFG00000010807	snrnp200	99	87.968	ENSOCUG00000009864	SNRNP200	100	87.968	Oryctolagus_cuniculus
ENSGAFG00000010807	snrnp200	99	93.486	ENSORLG00000012286	snrnp200	100	93.486	Oryzias_latipes
ENSGAFG00000010807	snrnp200	99	93.674	ENSORLG00020004648	snrnp200	100	93.674	Oryzias_latipes_hni
ENSGAFG00000010807	snrnp200	99	93.580	ENSORLG00015019114	snrnp200	100	93.580	Oryzias_latipes_hsok
ENSGAFG00000010807	snrnp200	100	93.867	ENSOMEG00000011834	snrnp200	100	93.867	Oryzias_melastigma
ENSGAFG00000010807	snrnp200	99	88.062	ENSOGAG00000006879	SNRNP200	100	88.062	Otolemur_garnettii
ENSGAFG00000010807	snrnp200	99	87.085	ENSOARG00000013949	SNRNP200	100	87.085	Ovis_aries
ENSGAFG00000010807	snrnp200	99	88.015	ENSPPAG00000041559	SNRNP200	100	88.015	Pan_paniscus
ENSGAFG00000010807	snrnp200	99	88.109	ENSPPRG00000004435	SNRNP200	100	88.109	Panthera_pardus
ENSGAFG00000010807	snrnp200	99	87.687	ENSPTIG00000006380	SNRNP200	100	87.687	Panthera_tigris_altaica
ENSGAFG00000010807	snrnp200	99	88.015	ENSPTRG00000012230	SNRNP200	100	88.015	Pan_troglodytes
ENSGAFG00000010807	snrnp200	99	87.968	ENSPANG00000006017	SNRNP200	100	87.968	Papio_anubis
ENSGAFG00000010807	snrnp200	100	94.724	ENSPKIG00000014762	snrnp200	100	94.724	Paramormyrops_kingsleyae
ENSGAFG00000010807	snrnp200	99	87.319	ENSPSIG00000008580	SNRNP200	100	87.319	Pelodiscus_sinensis
ENSGAFG00000010807	snrnp200	99	88.155	ENSPCIG00000023050	SNRNP200	100	88.155	Phascolarctos_cinereus
ENSGAFG00000010807	snrnp200	100	96.818	ENSPFOG00000015110	snrnp200	100	96.818	Poecilia_formosa
ENSGAFG00000010807	snrnp200	97	96.480	ENSPLAG00000006711	snrnp200	99	96.480	Poecilia_latipinna
ENSGAFG00000010807	snrnp200	97	96.535	ENSPMEG00000021166	snrnp200	99	96.535	Poecilia_mexicana
ENSGAFG00000010807	snrnp200	100	99.088	ENSPREG00000008875	snrnp200	100	99.088	Poecilia_reticulata
ENSGAFG00000010807	snrnp200	99	88.015	ENSPPYG00000012068	SNRNP200	100	88.015	Pongo_abelii
ENSGAFG00000010807	snrnp200	96	94.872	ENSPCAG00000008536	SNRNP200	86	97.872	Procavia_capensis
ENSGAFG00000010807	snrnp200	99	88.015	ENSPCOG00000024608	SNRNP200	100	88.015	Propithecus_coquereli
ENSGAFG00000010807	snrnp200	95	90.276	ENSPVAG00000005860	SNRNP200	92	90.276	Pteropus_vampyrus
ENSGAFG00000010807	snrnp200	99	94.041	ENSPNYG00000017476	snrnp200	100	93.971	Pundamilia_nyererei
ENSGAFG00000010807	snrnp200	100	91.990	ENSPNAG00000010998	snrnp200	100	91.990	Pygocentrus_nattereri
ENSGAFG00000010807	snrnp200	99	88.062	ENSRNOG00000012157	Snrnp200	100	88.062	Rattus_norvegicus
ENSGAFG00000010807	snrnp200	99	88.015	ENSRBIG00000044690	-	100	88.015	Rhinopithecus_bieti
ENSGAFG00000010807	snrnp200	99	88.015	ENSRROG00000037952	-	100	88.015	Rhinopithecus_roxellana
ENSGAFG00000010807	snrnp200	99	88.015	ENSSBOG00000035471	SNRNP200	97	92.330	Saimiri_boliviensis_boliviensis
ENSGAFG00000010807	snrnp200	97	87.954	ENSSHAG00000000758	SNRNP200	99	87.949	Sarcophilus_harrisii
ENSGAFG00000010807	snrnp200	99	92.293	ENSSFOG00015018826	snrnp200	100	92.232	Scleropages_formosus
ENSGAFG00000010807	snrnp200	100	94.195	ENSSMAG00000005463	snrnp200	100	94.195	Scophthalmus_maximus
ENSGAFG00000010807	snrnp200	100	94.991	ENSSDUG00000021410	snrnp200	100	94.991	Seriola_dumerili
ENSGAFG00000010807	snrnp200	100	94.710	ENSSLDG00000010884	snrnp200	100	94.710	Seriola_lalandi_dorsalis
ENSGAFG00000010807	snrnp200	95	88.472	ENSSARG00000010728	SNRNP200	96	88.441	Sorex_araneus
ENSGAFG00000010807	snrnp200	99	88.483	ENSSPUG00000003726	-	100	88.483	Sphenodon_punctatus
ENSGAFG00000010807	snrnp200	100	94.991	ENSSPAG00000001842	snrnp200	100	94.991	Stegastes_partitus
ENSGAFG00000010807	snrnp200	99	88.109	ENSSSCG00000008127	SNRNP200	100	88.109	Sus_scrofa
ENSGAFG00000010807	snrnp200	99	79.632	ENSTGUG00000014475	-	100	79.632	Taeniopygia_guttata
ENSGAFG00000010807	snrnp200	100	93.399	ENSTRUG00000001307	snrnp200	100	93.399	Takifugu_rubripes
ENSGAFG00000010807	snrnp200	99	82.134	ENSTNIG00000004320	snrnp200	100	82.134	Tetraodon_nigroviridis
ENSGAFG00000010807	snrnp200	81	93.897	ENSTBEG00000003329	-	67	93.897	Tupaia_belangeri
ENSGAFG00000010807	snrnp200	99	87.875	ENSTTRG00000004983	SNRNP200	100	87.875	Tursiops_truncatus
ENSGAFG00000010807	snrnp200	74	78.391	ENSUAMG00000008395	-	95	78.391	Ursus_americanus
ENSGAFG00000010807	snrnp200	99	88.109	ENSUMAG00000012385	SNRNP200	100	88.109	Ursus_maritimus
ENSGAFG00000010807	snrnp200	87	94.595	ENSVPAG00000006434	SNRNP200	66	94.595	Vicugna_pacos
ENSGAFG00000010807	snrnp200	99	90.307	ENSVVUG00000026247	SNRNP200	100	90.307	Vulpes_vulpes
ENSGAFG00000010807	snrnp200	99	88.073	ENSXETG00000001243	snrnp200	100	88.073	Xenopus_tropicalis
ENSGAFG00000010807	snrnp200	97	96.785	ENSXMAG00000002058	snrnp200	98	96.785	Xiphophorus_maculatus