EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010827 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 3337 bases
Position: chrNHOQ01001156.1:8756962-8760298
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016000	zf-C2H2	PF00096.26	8.4e-13	1	2
ENSGAFP00000016000	zf-C2H2	PF00096.26	8.4e-13	2	2
ENSGAFP00000016000	zf-met	PF12874.7	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000016156	-	1128	-	ENSGAFP00000016000	375 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010827	prdm12b	63	42.105	ENSGAFG00000019233	prdm5	84	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010827	prdm12b	90	82.596	ENSG00000130711	PRDM12	100	77.067	Homo_sapiens
ENSGAFG00000010827	prdm12b	99	65.354	ENSAPOG00000018234	-	100	65.354	Acanthochromis_polyacanthus
ENSGAFG00000010827	prdm12b	99	88.402	ENSAPOG00000016051	prdm12b	100	87.887	Acanthochromis_polyacanthus
ENSGAFG00000010827	prdm12b	88	82.121	ENSAMEG00000016234	PRDM12	99	82.424	Ailuropoda_melanoleuca
ENSGAFG00000010827	prdm12b	99	77.949	ENSACIG00000005193	-	100	77.692	Amphilophus_citrinellus
ENSGAFG00000010827	prdm12b	99	88.976	ENSACIG00000019578	prdm12b	100	88.714	Amphilophus_citrinellus
ENSGAFG00000010827	prdm12b	99	89.764	ENSAOCG00000015040	prdm12b	100	89.239	Amphiprion_ocellaris
ENSGAFG00000010827	prdm12b	100	73.846	ENSAPEG00000022849	-	100	74.103	Amphiprion_percula
ENSGAFG00000010827	prdm12b	99	90.476	ENSAPEG00000015092	prdm12b	100	90.476	Amphiprion_percula
ENSGAFG00000010827	prdm12b	99	79.221	ENSATEG00000014595	-	98	83.186	Anabas_testudineus
ENSGAFG00000010827	prdm12b	93	81.429	ENSANAG00000020616	PRDM12	98	82.596	Aotus_nancymaae
ENSGAFG00000010827	prdm12b	99	77.330	ENSACLG00000007631	-	100	77.020	Astatotilapia_calliptera
ENSGAFG00000010827	prdm12b	99	86.702	ENSACLG00000011876	prdm12b	100	85.904	Astatotilapia_calliptera
ENSGAFG00000010827	prdm12b	99	81.016	ENSAMXG00000008540	PRDM12	100	80.214	Astyanax_mexicanus
ENSGAFG00000010827	prdm12b	99	82.181	ENSAMXG00000033665	prdm12b	100	81.698	Astyanax_mexicanus
ENSGAFG00000010827	prdm12b	90	82.301	ENSBTAG00000023797	PRDM12	100	77.067	Bos_taurus
ENSGAFG00000010827	prdm12b	90	82.596	ENSCJAG00000020540	PRDM12	100	77.067	Callithrix_jacchus
ENSGAFG00000010827	prdm12b	79	83.446	ENSCAFG00000023076	PRDM12	99	77.410	Canis_familiaris
ENSGAFG00000010827	prdm12b	90	82.596	ENSCAFG00020024046	PRDM12	100	77.333	Canis_lupus_dingo
ENSGAFG00000010827	prdm12b	90	82.596	ENSCHIG00000025005	PRDM12	100	77.333	Capra_hircus
ENSGAFG00000010827	prdm12b	85	82.812	ENSCPOG00000005901	PRDM12	95	82.812	Cavia_porcellus
ENSGAFG00000010827	prdm12b	90	82.596	ENSCCAG00000037485	PRDM12	100	77.067	Cebus_capucinus
ENSGAFG00000010827	prdm12b	90	82.596	ENSCATG00000020327	PRDM12	100	77.067	Cercocebus_atys
ENSGAFG00000010827	prdm12b	90	82.440	ENSCLAG00000005499	PRDM12	90	82.440	Chinchilla_lanigera
ENSGAFG00000010827	prdm12b	90	82.596	ENSCSAG00000014756	PRDM12	100	77.067	Chlorocebus_sabaeus
ENSGAFG00000010827	prdm12b	100	79.365	ENSCPBG00000022628	PRDM12	100	78.042	Chrysemys_picta_bellii
ENSGAFG00000010827	prdm12b	90	82.301	ENSCGRG00001015005	Prdm12	100	77.067	Cricetulus_griseus_chok1gshd
ENSGAFG00000010827	prdm12b	99	94.164	ENSCVAG00000017166	prdm12b	100	93.103	Cyprinodon_variegatus
ENSGAFG00000010827	prdm12b	99	78.462	ENSCVAG00000000944	-	100	78.462	Cyprinodon_variegatus
ENSGAFG00000010827	prdm12b	99	82.133	ENSDARG00000007430	prdm12b	100	82.400	Danio_rerio
ENSGAFG00000010827	prdm12b	90	82.006	ENSDNOG00000042302	PRDM12	99	77.067	Dasypus_novemcinctus
ENSGAFG00000010827	prdm12b	84	66.567	ENSEBUG00000016780	prdm12b	74	67.560	Eptatretus_burgeri
ENSGAFG00000010827	prdm12b	93	81.429	ENSEASG00005008472	PRDM12	100	77.067	Equus_asinus_asinus
ENSGAFG00000010827	prdm12b	93	81.429	ENSECAG00000005933	PRDM12	100	77.067	Equus_caballus
ENSGAFG00000010827	prdm12b	99	80.533	ENSELUG00000013674	PRDM12	100	80.990	Esox_lucius
ENSGAFG00000010827	prdm12b	99	81.698	ENSELUG00000009905	prdm12b	100	81.432	Esox_lucius
ENSGAFG00000010827	prdm12b	90	82.596	ENSFCAG00000043086	PRDM12	100	77.333	Felis_catus
ENSGAFG00000010827	prdm12b	100	80.159	ENSFALG00000001445	PRDM12	89	78.836	Ficedula_albicollis
ENSGAFG00000010827	prdm12b	99	77.099	ENSFHEG00000007746	-	100	77.099	Fundulus_heteroclitus
ENSGAFG00000010827	prdm12b	99	93.421	ENSFHEG00000003944	prdm12b	100	92.368	Fundulus_heteroclitus
ENSGAFG00000010827	prdm12b	99	82.493	ENSGMOG00000011797	prdm12b	100	82.152	Gadus_morhua
ENSGAFG00000010827	prdm12b	100	80.159	ENSGALG00000003895	PRDM12	100	78.836	Gallus_gallus
ENSGAFG00000010827	prdm12b	100	88.158	ENSGACG00000016713	prdm12b	100	87.632	Gasterosteus_aculeatus
ENSGAFG00000010827	prdm12b	100	79.365	ENSGAGG00000014083	PRDM12	100	78.042	Gopherus_agassizii
ENSGAFG00000010827	prdm12b	90	82.301	ENSGGOG00000010568	PRDM12	100	76.800	Gorilla_gorilla
ENSGAFG00000010827	prdm12b	99	88.391	ENSHBUG00000022878	prdm12b	100	89.446	Haplochromis_burtoni
ENSGAFG00000010827	prdm12b	99	77.330	ENSHBUG00000022537	-	93	77.020	Haplochromis_burtoni
ENSGAFG00000010827	prdm12b	90	82.738	ENSHGLG00000013939	PRDM12	100	78.133	Heterocephalus_glaber_female
ENSGAFG00000010827	prdm12b	99	72.396	ENSHCOG00000021167	-	100	71.354	Hippocampus_comes
ENSGAFG00000010827	prdm12b	88	85.423	ENSHCOG00000003663	prdm12b	100	80.253	Hippocampus_comes
ENSGAFG00000010827	prdm12b	99	82.353	ENSIPUG00000017053	prdm12b	100	82.759	Ictalurus_punctatus
ENSGAFG00000010827	prdm12b	99	77.926	ENSIPUG00000019544	PRDM12	100	77.926	Ictalurus_punctatus
ENSGAFG00000010827	prdm12b	94	80.170	ENSSTOG00000005986	PRDM12	87	82.596	Ictidomys_tridecemlineatus
ENSGAFG00000010827	prdm12b	90	83.036	ENSJJAG00000005424	Prdm12	99	83.036	Jaculus_jaculus
ENSGAFG00000010827	prdm12b	94	78.090	ENSKMAG00000021205	-	93	77.809	Kryptolebias_marmoratus
ENSGAFG00000010827	prdm12b	99	81.931	ENSKMAG00000016921	prdm12b	100	83.663	Kryptolebias_marmoratus
ENSGAFG00000010827	prdm12b	99	78.947	ENSLBEG00000007776	-	100	79.737	Labrus_bergylta
ENSGAFG00000010827	prdm12b	99	89.446	ENSLBEG00000017769	prdm12b	100	88.654	Labrus_bergylta
ENSGAFG00000010827	prdm12b	99	78.989	ENSLACG00000017560	PRDM12	99	77.660	Latimeria_chalumnae
ENSGAFG00000010827	prdm12b	99	80.371	ENSLOCG00000005429	prdm12b	99	80.902	Lepisosteus_oculatus
ENSGAFG00000010827	prdm12b	90	82.891	ENSLAFG00000006979	PRDM12	91	82.891	Loxodonta_africana
ENSGAFG00000010827	prdm12b	90	82.301	ENSMFAG00000040322	PRDM12	100	76.533	Macaca_fascicularis
ENSGAFG00000010827	prdm12b	90	82.596	ENSMNEG00000037234	PRDM12	100	77.067	Macaca_nemestrina
ENSGAFG00000010827	prdm12b	99	75.190	ENSMAMG00000018988	-	100	74.430	Mastacembelus_armatus
ENSGAFG00000010827	prdm12b	99	87.435	ENSMAMG00000013212	prdm12b	100	87.173	Mastacembelus_armatus
ENSGAFG00000010827	prdm12b	99	76.942	ENSMZEG00005000415	PRDM12	100	76.633	Maylandia_zebra
ENSGAFG00000010827	prdm12b	94	82.353	ENSMGAG00000005438	PRDM12	92	85.672	Meleagris_gallopavo
ENSGAFG00000010827	prdm12b	100	77.867	ENSMAUG00000013040	Prdm12	100	76.720	Mesocricetus_auratus
ENSGAFG00000010827	prdm12b	93	81.609	ENSMICG00000015480	PRDM12	99	78.630	Microcebus_murinus
ENSGAFG00000010827	prdm12b	99	78.108	ENSMOCG00000021026	Prdm12	91	82.596	Microtus_ochrogaster
ENSGAFG00000010827	prdm12b	100	79.467	ENSMODG00000012108	PRDM12	100	77.660	Monodelphis_domestica
ENSGAFG00000010827	prdm12b	99	74.005	ENSMALG00000021901	prdm12b	99	73.087	Monopterus_albus
ENSGAFG00000010827	prdm12b	90	82.301	MGP_CAROLIEiJ_G0023414	Prdm12	100	78.400	Mus_caroli
ENSGAFG00000010827	prdm12b	90	82.301	ENSMUSG00000079466	Prdm12	100	78.400	Mus_musculus
ENSGAFG00000010827	prdm12b	90	82.301	MGP_PahariEiJ_G0024871	Prdm12	100	78.400	Mus_pahari
ENSGAFG00000010827	prdm12b	90	82.301	MGP_SPRETEiJ_G0024331	Prdm12	100	78.400	Mus_spretus
ENSGAFG00000010827	prdm12b	89	83.434	ENSNGAG00000018480	Prdm12	100	76.533	Nannospalax_galili
ENSGAFG00000010827	prdm12b	99	73.177	ENSNBRG00000024312	-	100	73.177	Neolamprologus_brichardi
ENSGAFG00000010827	prdm12b	99	88.220	ENSNBRG00000006727	prdm12b	100	88.220	Neolamprologus_brichardi
ENSGAFG00000010827	prdm12b	100	71.200	ENSMEUG00000003828	PRDM12	100	69.415	Notamacropus_eugenii
ENSGAFG00000010827	prdm12b	90	83.036	ENSOPRG00000008680	PRDM12	99	83.036	Ochotona_princeps
ENSGAFG00000010827	prdm12b	93	81.429	ENSODEG00000016282	PRDM12	62	82.738	Octodon_degus
ENSGAFG00000010827	prdm12b	63	76.891	ENSOANG00000001043	PRDM12	100	74.790	Ornithorhynchus_anatinus
ENSGAFG00000010827	prdm12b	82	83.660	ENSOCUG00000008241	PRDM12	96	83.660	Oryctolagus_cuniculus
ENSGAFG00000010827	prdm12b	99	77.692	ENSORLG00000017558	-	100	77.179	Oryzias_latipes
ENSGAFG00000010827	prdm12b	100	85.455	ENSORLG00000007114	prdm12b	100	85.233	Oryzias_latipes
ENSGAFG00000010827	prdm12b	99	77.238	ENSORLG00020013167	-	100	76.982	Oryzias_latipes_hni
ENSGAFG00000010827	prdm12b	100	85.530	ENSORLG00020019565	prdm12b	100	85.751	Oryzias_latipes_hni
ENSGAFG00000010827	prdm12b	99	77.692	ENSORLG00015003435	-	100	77.179	Oryzias_latipes_hsok
ENSGAFG00000010827	prdm12b	100	84.935	ENSORLG00015007621	prdm12b	100	85.233	Oryzias_latipes_hsok
ENSGAFG00000010827	prdm12b	100	85.090	ENSOMEG00000004134	prdm12b	100	85.347	Oryzias_melastigma
ENSGAFG00000010827	prdm12b	99	76.410	ENSOMEG00000007762	-	100	76.768	Oryzias_melastigma
ENSGAFG00000010827	prdm12b	90	82.596	ENSOGAG00000007557	PRDM12	99	82.596	Otolemur_garnettii
ENSGAFG00000010827	prdm12b	78	81.633	ENSPPAG00000031506	-	99	80.333	Pan_paniscus
ENSGAFG00000010827	prdm12b	100	72.074	ENSPPRG00000023024	PRDM12	85	76.471	Panthera_pardus
ENSGAFG00000010827	prdm12b	90	82.596	ENSPTRG00000021475	PRDM12	100	77.067	Pan_troglodytes
ENSGAFG00000010827	prdm12b	90	82.596	ENSPTRG00000043324	-	100	77.067	Pan_troglodytes
ENSGAFG00000010827	prdm12b	90	82.596	ENSPANG00000025967	PRDM12	100	77.067	Papio_anubis
ENSGAFG00000010827	prdm12b	99	82.804	ENSPKIG00000007228	prdm12b	100	82.804	Paramormyrops_kingsleyae
ENSGAFG00000010827	prdm12b	89	81.928	ENSPKIG00000004305	PRDM12	94	81.928	Paramormyrops_kingsleyae
ENSGAFG00000010827	prdm12b	100	79.101	ENSPSIG00000006739	PRDM12	100	77.778	Pelodiscus_sinensis
ENSGAFG00000010827	prdm12b	99	75.192	ENSPMGG00000002356	-	100	75.385	Periophthalmus_magnuspinnatus
ENSGAFG00000010827	prdm12b	100	86.170	ENSPMGG00000008867	prdm12b	100	86.508	Periophthalmus_magnuspinnatus
ENSGAFG00000010827	prdm12b	96	78.415	ENSPEMG00000009969	Prdm12	91	82.301	Peromyscus_maniculatus_bairdii
ENSGAFG00000010827	prdm12b	100	79.467	ENSPCIG00000024119	PRDM12	100	77.660	Phascolarctos_cinereus
ENSGAFG00000010827	prdm12b	99	94.723	ENSPFOG00000019841	prdm12b	100	94.723	Poecilia_formosa
ENSGAFG00000010827	prdm12b	100	97.619	ENSPLAG00000016626	prdm12b	100	97.619	Poecilia_latipinna
ENSGAFG00000010827	prdm12b	96	98.352	ENSPMEG00000016698	prdm12b	99	98.352	Poecilia_mexicana
ENSGAFG00000010827	prdm12b	95	74.795	ENSPREG00000003211	-	94	73.973	Poecilia_reticulata
ENSGAFG00000010827	prdm12b	100	97.625	ENSPREG00000015073	prdm12b	100	97.625	Poecilia_reticulata
ENSGAFG00000010827	prdm12b	96	79.666	ENSPPYG00000019694	PRDM12	93	83.735	Pongo_abelii
ENSGAFG00000010827	prdm12b	90	82.596	ENSPCOG00000022255	PRDM12	100	77.600	Propithecus_coquereli
ENSGAFG00000010827	prdm12b	90	82.596	ENSPVAG00000001511	PRDM12	100	77.600	Pteropus_vampyrus
ENSGAFG00000010827	prdm12b	99	76.942	ENSPNYG00000013589	-	100	76.633	Pundamilia_nyererei
ENSGAFG00000010827	prdm12b	99	88.189	ENSPNYG00000009607	prdm12b	100	88.189	Pundamilia_nyererei
ENSGAFG00000010827	prdm12b	99	83.245	ENSPNAG00000024532	prdm12b	100	82.713	Pygocentrus_nattereri
ENSGAFG00000010827	prdm12b	99	79.420	ENSPNAG00000013396	PRDM12	100	79.420	Pygocentrus_nattereri
ENSGAFG00000010827	prdm12b	90	82.301	ENSRNOG00000009218	Prdm12	100	78.400	Rattus_norvegicus
ENSGAFG00000010827	prdm12b	86	83.642	ENSRBIG00000042712	PRDM12	88	82.927	Rhinopithecus_bieti
ENSGAFG00000010827	prdm12b	87	83.841	ENSRROG00000043554	PRDM12	100	83.841	Rhinopithecus_roxellana
ENSGAFG00000010827	prdm12b	100	78.723	ENSSHAG00000015972	PRDM12	100	76.923	Sarcophilus_harrisii
ENSGAFG00000010827	prdm12b	99	85.385	ENSSMAG00000003754	prdm12b	100	84.848	Scophthalmus_maximus
ENSGAFG00000010827	prdm12b	99	79.167	ENSSDUG00000019071	-	100	79.688	Seriola_dumerili
ENSGAFG00000010827	prdm12b	99	87.113	ENSSDUG00000023498	prdm12b	100	86.856	Seriola_dumerili
ENSGAFG00000010827	prdm12b	99	86.340	ENSSLDG00000009557	prdm12b	100	86.598	Seriola_lalandi_dorsalis
ENSGAFG00000010827	prdm12b	99	77.600	ENSSLDG00000013562	-	100	77.333	Seriola_lalandi_dorsalis
ENSGAFG00000010827	prdm12b	100	77.984	ENSSPUG00000013424	PRDM12	100	76.658	Sphenodon_punctatus
ENSGAFG00000010827	prdm12b	99	89.005	ENSSPAG00000018824	prdm12b	100	89.005	Stegastes_partitus
ENSGAFG00000010827	prdm12b	99	72.032	ENSSPAG00000022420	-	100	72.296	Stegastes_partitus
ENSGAFG00000010827	prdm12b	90	82.596	ENSSSCG00000005703	PRDM12	100	77.333	Sus_scrofa
ENSGAFG00000010827	prdm12b	99	87.302	ENSTRUG00000018659	prdm12b	100	86.243	Takifugu_rubripes
ENSGAFG00000010827	prdm12b	99	76.579	ENSTRUG00000013239	-	100	76.579	Takifugu_rubripes
ENSGAFG00000010827	prdm12b	99	86.772	ENSTNIG00000009020	prdm12b	99	87.037	Tetraodon_nigroviridis
ENSGAFG00000010827	prdm12b	99	75.726	ENSTNIG00000005859	-	99	74.934	Tetraodon_nigroviridis
ENSGAFG00000010827	prdm12b	90	82.596	ENSUAMG00000009653	PRDM12	92	82.596	Ursus_americanus
ENSGAFG00000010827	prdm12b	90	82.596	ENSVVUG00000027662	PRDM12	79	82.596	Vulpes_vulpes
ENSGAFG00000010827	prdm12b	100	98.933	ENSXCOG00000002836	prdm12b	100	98.933	Xiphophorus_couchianus
ENSGAFG00000010827	prdm12b	99	97.347	ENSXMAG00000005537	prdm12b	100	97.347	Xiphophorus_maculatus
ENSGAFG00000010827	prdm12b	99	75.250	ENSXMAG00000028012	-	100	75.000	Xiphophorus_maculatus