EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000010998 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 1703 bases
Position: chrNHOQ01002481.1:3681255-3682957
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016279	RRM_1	PF00076.22	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000016435	-	303	-	ENSGAFP00000016279	100 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000010998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000010998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000010998	slirp	58	34.483	ENSGAFG00000004817	-	93	30.682
ENSGAFG00000010998	slirp	62	35.484	ENSGAFG00000004493	-	78	35.484
ENSGAFG00000010998	slirp	79	38.462	ENSGAFG00000003714	hnrnpd	54	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000010998	slirp	84	59.524	ENSG00000119705	SLIRP	93	63.380	Homo_sapiens
ENSGAFG00000010998	slirp	100	77.000	ENSAPOG00000001298	slirp	100	77.000	Acanthochromis_polyacanthus
ENSGAFG00000010998	slirp	69	59.420	ENSAMEG00000003975	SLIRP	76	59.420	Ailuropoda_melanoleuca
ENSGAFG00000010998	slirp	98	74.490	ENSACIG00000023083	slirp	97	74.490	Amphilophus_citrinellus
ENSGAFG00000010998	slirp	98	75.510	ENSAOCG00000006342	slirp	99	75.510	Amphiprion_ocellaris
ENSGAFG00000010998	slirp	97	75.258	ENSAPEG00000015719	-	99	75.258	Amphiprion_percula
ENSGAFG00000010998	slirp	98	75.510	ENSAPEG00000015917	slirp	99	75.510	Amphiprion_percula
ENSGAFG00000010998	slirp	100	71.000	ENSATEG00000013525	slirp	100	71.000	Anabas_testudineus
ENSGAFG00000010998	slirp	98	59.184	ENSAMXG00000018693	slirp	98	59.184	Astyanax_mexicanus
ENSGAFG00000010998	slirp	89	56.180	ENSCJAG00000016946	SLIRP	81	56.180	Callithrix_jacchus
ENSGAFG00000010998	slirp	91	54.839	ENSCAFG00020015876	-	84	54.839	Canis_lupus_dingo
ENSGAFG00000010998	slirp	89	53.933	ENSCCAG00000030130	SLIRP	81	53.933	Cebus_capucinus
ENSGAFG00000010998	slirp	77	62.338	ENSCATG00000036327	SLIRP	75	65.714	Cercocebus_atys
ENSGAFG00000010998	slirp	89	55.056	ENSCSAG00000011736	SLIRP	82	55.056	Chlorocebus_sabaeus
ENSGAFG00000010998	slirp	79	58.228	ENSCPBG00000026327	SLIRP	80	58.228	Chrysemys_picta_bellii
ENSGAFG00000010998	slirp	70	64.286	ENSCANG00000032892	SLIRP	71	64.286	Colobus_angolensis_palliatus
ENSGAFG00000010998	slirp	99	49.020	ENSCGRG00001024068	Slirp	92	49.020	Cricetulus_griseus_chok1gshd
ENSGAFG00000010998	slirp	99	49.020	ENSCGRG00000017440	Slirp	92	49.020	Cricetulus_griseus_crigri
ENSGAFG00000010998	slirp	94	57.895	ENSCSEG00000015766	slirp	97	57.895	Cynoglossus_semilaevis
ENSGAFG00000010998	slirp	79	87.342	ENSCVAG00000012504	slirp	78	87.342	Cyprinodon_variegatus
ENSGAFG00000010998	slirp	91	74.725	ENSDARG00000097753	slirp	91	73.404	Danio_rerio
ENSGAFG00000010998	slirp	89	47.778	ENSDNOG00000007721	SLIRP	82	47.778	Dasypus_novemcinctus
ENSGAFG00000010998	slirp	76	53.947	ENSDORG00000012379	Slirp	68	53.947	Dipodomys_ordii
ENSGAFG00000010998	slirp	89	52.809	ENSETEG00000010345	SLIRP	81	52.809	Echinops_telfairi
ENSGAFG00000010998	slirp	75	60.000	ENSEASG00005020193	SLIRP	68	60.000	Equus_asinus_asinus
ENSGAFG00000010998	slirp	89	53.333	ENSEEUG00000007257	SLIRP	89	53.333	Erinaceus_europaeus
ENSGAFG00000010998	slirp	95	71.579	ENSELUG00000016800	slirp	94	71.579	Esox_lucius
ENSGAFG00000010998	slirp	71	57.746	ENSFCAG00000036326	SLIRP	72	57.746	Felis_catus
ENSGAFG00000010998	slirp	78	60.256	ENSFALG00000012583	SLIRP	85	55.556	Ficedula_albicollis
ENSGAFG00000010998	slirp	75	54.667	ENSFDAG00000008347	SLIRP	66	54.667	Fukomys_damarensis
ENSGAFG00000010998	slirp	78	85.897	ENSFHEG00000004709	slirp	85	85.897	Fundulus_heteroclitus
ENSGAFG00000010998	slirp	97	68.041	ENSGMOG00000016948	slirp	93	68.041	Gadus_morhua
ENSGAFG00000010998	slirp	88	56.818	ENSGALG00000031238	SLIRP	85	56.818	Gallus_gallus
ENSGAFG00000010998	slirp	82	80.488	ENSGACG00000020137	slirp	95	80.488	Gasterosteus_aculeatus
ENSGAFG00000010998	slirp	93	58.511	ENSGAGG00000009953	SLIRP	65	58.511	Gopherus_agassizii
ENSGAFG00000010998	slirp	84	59.524	ENSGGOG00000011059	-	75	64.286	Gorilla_gorilla
ENSGAFG00000010998	slirp	89	46.154	ENSHGLG00000018491	SLIRP	82	46.154	Heterocephalus_glaber_female
ENSGAFG00000010998	slirp	89	46.154	ENSHGLG00100014153	SLIRP	82	46.154	Heterocephalus_glaber_male
ENSGAFG00000010998	slirp	96	80.208	ENSHCOG00000006795	slirp	97	80.208	Hippocampus_comes
ENSGAFG00000010998	slirp	98	73.469	ENSIPUG00000010214	SLIRP	98	73.469	Ictalurus_punctatus
ENSGAFG00000010998	slirp	89	51.648	ENSSTOG00000034316	SLIRP	82	51.648	Ictidomys_tridecemlineatus
ENSGAFG00000010998	slirp	100	67.000	ENSKMAG00000002038	slirp	96	67.000	Kryptolebias_marmoratus
ENSGAFG00000010998	slirp	100	70.000	ENSLBEG00000007564	slirp	100	70.000	Labrus_bergylta
ENSGAFG00000010998	slirp	95	69.474	ENSLACG00000013434	SLIRP	91	69.474	Latimeria_chalumnae
ENSGAFG00000010998	slirp	89	55.056	ENSMFAG00000042960	SLIRP	75	65.714	Macaca_fascicularis
ENSGAFG00000010998	slirp	84	60.714	ENSMMUG00000029256	SLIRP	75	65.714	Macaca_mulatta
ENSGAFG00000010998	slirp	89	55.056	ENSMNEG00000028921	SLIRP	75	65.714	Macaca_nemestrina
ENSGAFG00000010998	slirp	74	62.162	ENSMLEG00000043644	SLIRP	71	65.714	Mandrillus_leucophaeus
ENSGAFG00000010998	slirp	98	77.551	ENSMZEG00005004617	slirp	99	77.551	Maylandia_zebra
ENSGAFG00000010998	slirp	89	52.747	ENSMAUG00000003857	Slirp	82	52.747	Mesocricetus_auratus
ENSGAFG00000010998	slirp	89	46.154	ENSMICG00000012080	SLIRP	64	63.768	Microcebus_murinus
ENSGAFG00000010998	slirp	72	58.333	ENSMOCG00000016019	Slirp	70	56.338	Microtus_ochrogaster
ENSGAFG00000010998	slirp	100	74.000	ENSMMOG00000018268	slirp	100	74.000	Mola_mola
ENSGAFG00000010998	slirp	69	52.174	ENSMODG00000005207	-	97	52.174	Monodelphis_domestica
ENSGAFG00000010998	slirp	98	74.490	ENSMALG00000012581	slirp	100	74.490	Monopterus_albus
ENSGAFG00000010998	slirp	85	56.471	MGP_CAROLIEiJ_G0017995	Slirp	78	56.471	Mus_caroli
ENSGAFG00000010998	slirp	99	50.000	ENSMUSG00000021040	Slirp	88	50.000	Mus_musculus
ENSGAFG00000010998	slirp	75	60.000	MGP_SPRETEiJ_G0018840	Slirp	67	60.000	Mus_spretus
ENSGAFG00000010998	slirp	89	50.549	ENSMLUG00000024998	-	88	50.000	Myotis_lucifugus
ENSGAFG00000010998	slirp	98	51.000	ENSMLUG00000029544	-	88	51.000	Myotis_lucifugus
ENSGAFG00000010998	slirp	84	47.059	ENSNGAG00000016363	Slirp	82	47.059	Nannospalax_galili
ENSGAFG00000010998	slirp	89	49.438	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSGAFG00000010998	slirp	89	49.438	ENSNLEG00000032459	-	75	57.143	Nomascus_leucogenys
ENSGAFG00000010998	slirp	77	59.740	ENSODEG00000012580	SLIRP	77	59.155	Octodon_degus
ENSGAFG00000010998	slirp	98	76.531	ENSONIG00000011692	slirp	99	76.531	Oreochromis_niloticus
ENSGAFG00000010998	slirp	88	55.556	ENSOANG00000022366	SLIRP	81	55.556	Ornithorhynchus_anatinus
ENSGAFG00000010998	slirp	100	75.000	ENSORLG00000010761	slirp	78	75.000	Oryzias_latipes
ENSGAFG00000010998	slirp	100	74.000	ENSORLG00020022188	slirp	100	74.000	Oryzias_latipes_hni
ENSGAFG00000010998	slirp	99	76.768	ENSORLG00015020171	slirp	98	76.768	Oryzias_latipes_hsok
ENSGAFG00000010998	slirp	100	76.000	ENSOMEG00000019321	slirp	100	76.000	Oryzias_melastigma
ENSGAFG00000010998	slirp	84	60.714	ENSPPAG00000040710	-	75	64.286	Pan_paniscus
ENSGAFG00000010998	slirp	70	58.571	ENSPPRG00000014350	SLIRP	71	58.571	Panthera_pardus
ENSGAFG00000010998	slirp	70	58.571	ENSPTIG00000014196	SLIRP	71	58.571	Panthera_tigris_altaica
ENSGAFG00000010998	slirp	84	59.524	ENSPTRG00000030691	SLIRP	75	64.286	Pan_troglodytes
ENSGAFG00000010998	slirp	89	55.056	ENSPANG00000026323	SLIRP	75	65.714	Papio_anubis
ENSGAFG00000010998	slirp	66	72.727	ENSPKIG00000008831	slirp	65	72.727	Paramormyrops_kingsleyae
ENSGAFG00000010998	slirp	79	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSGAFG00000010998	slirp	72	58.333	ENSPEMG00000013234	Slirp	70	56.338	Peromyscus_maniculatus_bairdii
ENSGAFG00000010998	slirp	85	49.412	ENSPMAG00000009355	slirp	94	49.412	Petromyzon_marinus
ENSGAFG00000010998	slirp	78	50.000	ENSPCIG00000026842	-	84	50.000	Phascolarctos_cinereus
ENSGAFG00000010998	slirp	99	89.899	ENSPFOG00000006758	slirp	99	89.899	Poecilia_formosa
ENSGAFG00000010998	slirp	99	90.909	ENSPLAG00000011140	slirp	99	90.909	Poecilia_latipinna
ENSGAFG00000010998	slirp	99	89.899	ENSPMEG00000019535	slirp	99	89.899	Poecilia_mexicana
ENSGAFG00000010998	slirp	99	89.899	ENSPREG00000011673	slirp	99	89.899	Poecilia_reticulata
ENSGAFG00000010998	slirp	75	61.333	ENSPPYG00000006030	SLIRP	69	61.333	Pongo_abelii
ENSGAFG00000010998	slirp	77	58.442	ENSPCOG00000015159	SLIRP	64	60.870	Propithecus_coquereli
ENSGAFG00000010998	slirp	95	72.632	ENSPNAG00000008633	slirp	96	72.632	Pygocentrus_nattereri
ENSGAFG00000010998	slirp	70	64.286	ENSRBIG00000032998	-	64	64.286	Rhinopithecus_bieti
ENSGAFG00000010998	slirp	75	57.333	ENSRBIG00000035817	-	69	57.333	Rhinopithecus_bieti
ENSGAFG00000010998	slirp	66	66.667	ENSRBIG00000031396	-	66	66.667	Rhinopithecus_bieti
ENSGAFG00000010998	slirp	89	59.551	ENSRBIG00000032222	-	75	65.714	Rhinopithecus_bieti
ENSGAFG00000010998	slirp	66	65.152	ENSRROG00000035604	-	66	65.152	Rhinopithecus_roxellana
ENSGAFG00000010998	slirp	68	66.176	ENSRROG00000017133	-	71	66.176	Rhinopithecus_roxellana
ENSGAFG00000010998	slirp	72	65.278	ENSRROG00000041312	-	71	65.278	Rhinopithecus_roxellana
ENSGAFG00000010998	slirp	89	59.551	ENSRROG00000036656	-	75	65.714	Rhinopithecus_roxellana
ENSGAFG00000010998	slirp	70	62.857	ENSSBOG00000020014	SLIRP	75	62.857	Saimiri_boliviensis_boliviensis
ENSGAFG00000010998	slirp	87	67.816	ENSSFOG00015011165	slirp	88	67.816	Scleropages_formosus
ENSGAFG00000010998	slirp	100	51.961	ENSSMAG00000012930	slirp	100	51.961	Scophthalmus_maximus
ENSGAFG00000010998	slirp	100	77.000	ENSSDUG00000021883	slirp	66	77.000	Seriola_dumerili
ENSGAFG00000010998	slirp	100	77.000	ENSSLDG00000023136	slirp	91	77.000	Seriola_lalandi_dorsalis
ENSGAFG00000010998	slirp	86	62.500	ENSSPUG00000009346	SLIRP	90	62.500	Sphenodon_punctatus
ENSGAFG00000010998	slirp	100	66.000	ENSSPAG00000013477	slirp	100	66.000	Stegastes_partitus
ENSGAFG00000010998	slirp	89	51.648	ENSSSCG00000028167	SLIRP	82	51.648	Sus_scrofa
ENSGAFG00000010998	slirp	78	58.974	ENSTGUG00000012337	SLIRP	87	52.174	Taeniopygia_guttata
ENSGAFG00000010998	slirp	98	65.657	ENSTRUG00000020127	slirp	98	65.657	Takifugu_rubripes
ENSGAFG00000010998	slirp	89	55.435	ENSUAMG00000022445	SLIRP	82	55.435	Ursus_americanus
ENSGAFG00000010998	slirp	89	55.435	ENSUMAG00000007166	SLIRP	82	55.435	Ursus_maritimus
ENSGAFG00000010998	slirp	89	51.685	ENSVPAG00000001781	SLIRP	81	51.685	Vicugna_pacos
ENSGAFG00000010998	slirp	89	54.348	ENSVVUG00000004436	SLIRP	82	54.348	Vulpes_vulpes
ENSGAFG00000010998	slirp	81	66.667	ENSXETG00000030343	SLIRP	91	66.667	Xenopus_tropicalis
ENSGAFG00000010998	slirp	100	92.000	ENSXCOG00000009422	slirp	100	92.000	Xiphophorus_couchianus
ENSGAFG00000010998	slirp	100	94.000	ENSXMAG00000015655	slirp	100	94.000	Xiphophorus_maculatus