EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000011110 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8181 bases
Position: chrNHOQ01001024.1:70478-78658
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016482	ResIII	PF04851.15	3e-08	1	1
ENSGAFP00000016482	DEAD	PF00270.29	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000016640	-	2736	-	ENSGAFP00000016482	673 (aa)	-	-
ENSGAFT00000016629	-	1362	-	ENSGAFP00000016472	453 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000011110	rad54l	90	44.481	ENSGAFG00000007901	rad54b	71	44.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011110	rad54l	100	79.204	ENSG00000085999	RAD54L	100	82.667	Homo_sapiens
ENSGAFG00000011110	rad54l	99	84.101	ENSAPOG00000011643	rad54l	91	84.101	Acanthochromis_polyacanthus
ENSGAFG00000011110	rad54l	99	78.582	ENSAMEG00000013902	RAD54L	91	78.582	Ailuropoda_melanoleuca
ENSGAFG00000011110	rad54l	99	84.101	ENSACIG00000001939	rad54l	90	84.101	Amphilophus_citrinellus
ENSGAFG00000011110	rad54l	100	87.685	ENSAOCG00000017576	rad54l	91	87.685	Amphiprion_ocellaris
ENSGAFG00000011110	rad54l	96	88.462	ENSAPEG00000020658	rad54l	90	88.462	Amphiprion_percula
ENSGAFG00000011110	rad54l	95	90.094	ENSATEG00000006767	rad54l	91	90.094	Anabas_testudineus
ENSGAFG00000011110	rad54l	94	82.334	ENSAPLG00000006389	RAD54L	90	82.334	Anas_platyrhynchos
ENSGAFG00000011110	rad54l	100	80.973	ENSACAG00000002312	RAD54L	91	80.973	Anolis_carolinensis
ENSGAFG00000011110	rad54l	100	78.761	ENSANAG00000035439	RAD54L	91	78.761	Aotus_nancymaae
ENSGAFG00000011110	rad54l	100	84.866	ENSACLG00000018711	rad54l	91	84.866	Astatotilapia_calliptera
ENSGAFG00000011110	rad54l	100	83.432	ENSAMXG00000012777	rad54l	91	83.432	Astyanax_mexicanus
ENSGAFG00000011110	rad54l	100	78.940	ENSBTAG00000019901	RAD54L	91	78.940	Bos_taurus
ENSGAFG00000011110	rad54l	91	60.325	WBGene00004298	rad-54	75	60.325	Caenorhabditis_elegans
ENSGAFG00000011110	rad54l	100	78.877	ENSCJAG00000021080	RAD54L	85	80.357	Callithrix_jacchus
ENSGAFG00000011110	rad54l	100	78.761	ENSCAFG00000004272	RAD54L	91	78.761	Canis_familiaris
ENSGAFG00000011110	rad54l	99	78.730	ENSCAFG00020015066	RAD54L	91	78.730	Canis_lupus_dingo
ENSGAFG00000011110	rad54l	99	78.909	ENSCHIG00000020118	RAD54L	91	78.909	Capra_hircus
ENSGAFG00000011110	rad54l	100	78.203	ENSTSYG00000002032	RAD54L	91	78.203	Carlito_syrichta
ENSGAFG00000011110	rad54l	100	79.204	ENSCPOG00000006768	RAD54L	91	79.204	Cavia_porcellus
ENSGAFG00000011110	rad54l	100	79.204	ENSCCAG00000025783	RAD54L	91	79.204	Cebus_capucinus
ENSGAFG00000011110	rad54l	100	78.909	ENSCATG00000030589	RAD54L	91	78.909	Cercocebus_atys
ENSGAFG00000011110	rad54l	100	78.909	ENSCLAG00000004645	RAD54L	91	78.909	Chinchilla_lanigera
ENSGAFG00000011110	rad54l	100	78.909	ENSCSAG00000001229	RAD54L	91	78.909	Chlorocebus_sabaeus
ENSGAFG00000011110	rad54l	100	80.088	ENSCPBG00000005675	RAD54L	91	80.088	Chrysemys_picta_bellii
ENSGAFG00000011110	rad54l	99	63.248	ENSCING00000024456	-	91	63.248	Ciona_intestinalis
ENSGAFG00000011110	rad54l	99	63.506	ENSCSAVG00000010859	-	91	63.506	Ciona_savignyi
ENSGAFG00000011110	rad54l	100	78.761	ENSCANG00000034891	RAD54L	91	78.761	Colobus_angolensis_palliatus
ENSGAFG00000011110	rad54l	100	78.074	ENSCGRG00001014807	Rad54l	91	78.074	Cricetulus_griseus_chok1gshd
ENSGAFG00000011110	rad54l	100	78.074	ENSCGRG00000016038	Rad54l	91	78.074	Cricetulus_griseus_crigri
ENSGAFG00000011110	rad54l	99	85.119	ENSCSEG00000001983	rad54l	91	85.119	Cynoglossus_semilaevis
ENSGAFG00000011110	rad54l	75	94.475	ENSCVAG00000019561	rad54l	88	94.475	Cyprinodon_variegatus
ENSGAFG00000011110	rad54l	100	82.467	ENSDARG00000018623	rad54l	91	82.467	Danio_rerio
ENSGAFG00000011110	rad54l	100	78.466	ENSDNOG00000003395	RAD54L	91	78.466	Dasypus_novemcinctus
ENSGAFG00000011110	rad54l	100	71.221	ENSDORG00000002632	Rad54l	91	71.366	Dipodomys_ordii
ENSGAFG00000011110	rad54l	100	53.256	FBgn0002989	okr	87	53.256	Drosophila_melanogaster
ENSGAFG00000011110	rad54l	75	78.182	ENSETEG00000000550	RAD54L	69	78.182	Echinops_telfairi
ENSGAFG00000011110	rad54l	100	78.783	ENSEASG00005004511	RAD54L	91	78.877	Equus_asinus_asinus
ENSGAFG00000011110	rad54l	100	79.204	ENSECAG00000008760	RAD54L	90	81.818	Equus_caballus
ENSGAFG00000011110	rad54l	100	76.549	ENSEEUG00000008113	RAD54L	91	76.549	Erinaceus_europaeus
ENSGAFG00000011110	rad54l	100	84.536	ENSELUG00000002295	rad54l	91	84.536	Esox_lucius
ENSGAFG00000011110	rad54l	100	78.466	ENSFCAG00000003444	RAD54L	91	78.466	Felis_catus
ENSGAFG00000011110	rad54l	99	79.941	ENSFALG00000009480	RAD54L	91	79.941	Ficedula_albicollis
ENSGAFG00000011110	rad54l	100	78.614	ENSFDAG00000007806	RAD54L	91	78.614	Fukomys_damarensis
ENSGAFG00000011110	rad54l	71	86.694	ENSFHEG00000009824	rad54l	82	86.694	Fundulus_heteroclitus
ENSGAFG00000011110	rad54l	99	82.169	ENSGMOG00000014568	rad54l	91	82.169	Gadus_morhua
ENSGAFG00000011110	rad54l	100	80.473	ENSGALG00000010356	RAD54L	84	80.473	Gallus_gallus
ENSGAFG00000011110	rad54l	100	86.963	ENSGACG00000003111	rad54l	89	86.963	Gasterosteus_aculeatus
ENSGAFG00000011110	rad54l	99	79.173	ENSGAGG00000014089	RAD54L	87	79.173	Gopherus_agassizii
ENSGAFG00000011110	rad54l	100	78.761	ENSGGOG00000010602	RAD54L	91	78.761	Gorilla_gorilla
ENSGAFG00000011110	rad54l	100	85.015	ENSHBUG00000007793	rad54l	91	85.015	Haplochromis_burtoni
ENSGAFG00000011110	rad54l	100	78.909	ENSHGLG00000000753	RAD54L	91	78.909	Heterocephalus_glaber_female
ENSGAFG00000011110	rad54l	100	78.909	ENSHGLG00100016987	RAD54L	91	78.909	Heterocephalus_glaber_male
ENSGAFG00000011110	rad54l	100	82.006	ENSIPUG00000015999	rad54l	91	85.103	Ictalurus_punctatus
ENSGAFG00000011110	rad54l	100	78.171	ENSSTOG00000029125	RAD54L	91	78.171	Ictidomys_tridecemlineatus
ENSGAFG00000011110	rad54l	99	64.845	ENSJJAG00000000235	-	89	64.845	Jaculus_jaculus
ENSGAFG00000011110	rad54l	100	86.330	ENSKMAG00000009944	rad54l	91	86.330	Kryptolebias_marmoratus
ENSGAFG00000011110	rad54l	100	86.647	ENSLBEG00000014617	rad54l	88	89.819	Labrus_bergylta
ENSGAFG00000011110	rad54l	99	83.780	ENSLOCG00000004144	rad54l	100	83.780	Lepisosteus_oculatus
ENSGAFG00000011110	rad54l	99	79.173	ENSLAFG00000007583	RAD54L	91	79.173	Loxodonta_africana
ENSGAFG00000011110	rad54l	100	78.909	ENSMFAG00000031241	RAD54L	91	78.909	Macaca_fascicularis
ENSGAFG00000011110	rad54l	100	78.909	ENSMMUG00000011568	RAD54L	91	78.909	Macaca_mulatta
ENSGAFG00000011110	rad54l	100	78.761	ENSMNEG00000038562	RAD54L	91	78.761	Macaca_nemestrina
ENSGAFG00000011110	rad54l	100	78.909	ENSMLEG00000038145	RAD54L	91	78.909	Mandrillus_leucophaeus
ENSGAFG00000011110	rad54l	100	85.185	ENSMAMG00000022180	rad54l	90	87.296	Mastacembelus_armatus
ENSGAFG00000011110	rad54l	100	84.866	ENSMZEG00005018081	rad54l	91	84.866	Maylandia_zebra
ENSGAFG00000011110	rad54l	99	80.444	ENSMGAG00000010634	RAD54L	91	80.444	Meleagris_gallopavo
ENSGAFG00000011110	rad54l	100	78.519	ENSMAUG00000020076	Rad54l	91	78.519	Mesocricetus_auratus
ENSGAFG00000011110	rad54l	100	79.204	ENSMICG00000003266	RAD54L	91	79.204	Microcebus_murinus
ENSGAFG00000011110	rad54l	100	78.667	ENSMOCG00000001778	Rad54l	91	78.667	Microtus_ochrogaster
ENSGAFG00000011110	rad54l	99	82.544	ENSMALG00000021148	rad54l	91	82.544	Monopterus_albus
ENSGAFG00000011110	rad54l	100	73.820	MGP_CAROLIEiJ_G0026325	Rad54l	91	73.820	Mus_caroli
ENSGAFG00000011110	rad54l	100	78.024	ENSMUSG00000028702	Rad54l	91	78.024	Mus_musculus
ENSGAFG00000011110	rad54l	100	77.696	MGP_PahariEiJ_G0028657	Rad54l	91	77.696	Mus_pahari
ENSGAFG00000011110	rad54l	100	78.171	MGP_SPRETEiJ_G0027297	Rad54l	91	78.171	Mus_spretus
ENSGAFG00000011110	rad54l	99	78.614	ENSMPUG00000012883	RAD54L	91	78.614	Mustela_putorius_furo
ENSGAFG00000011110	rad54l	99	79.468	ENSMLUG00000003763	RAD54L	91	79.468	Myotis_lucifugus
ENSGAFG00000011110	rad54l	100	78.434	ENSNGAG00000024213	Rad54l	91	78.434	Nannospalax_galili
ENSGAFG00000011110	rad54l	100	78.466	ENSNLEG00000016548	RAD54L	91	78.466	Nomascus_leucogenys
ENSGAFG00000011110	rad54l	90	77.961	ENSMEUG00000006793	RAD54L	90	77.961	Notamacropus_eugenii
ENSGAFG00000011110	rad54l	90	87.215	ENSOPRG00000016016	RAD54L	82	87.215	Ochotona_princeps
ENSGAFG00000011110	rad54l	100	79.646	ENSODEG00000008519	RAD54L	91	79.646	Octodon_degus
ENSGAFG00000011110	rad54l	100	85.163	ENSONIG00000007659	rad54l	91	85.163	Oreochromis_niloticus
ENSGAFG00000011110	rad54l	100	79.087	ENSOCUG00000005229	RAD54L	91	79.087	Oryctolagus_cuniculus
ENSGAFG00000011110	rad54l	100	82.912	ENSORLG00000002958	rad54l	91	82.912	Oryzias_latipes
ENSGAFG00000011110	rad54l	100	83.210	ENSORLG00020006554	rad54l	90	86.829	Oryzias_latipes_hni
ENSGAFG00000011110	rad54l	100	83.210	ENSORLG00015002907	rad54l	91	83.210	Oryzias_latipes_hsok
ENSGAFG00000011110	rad54l	100	83.061	ENSOMEG00000007770	rad54l	91	83.061	Oryzias_melastigma
ENSGAFG00000011110	rad54l	100	78.971	ENSOARG00000002264	RAD54L	91	78.971	Ovis_aries
ENSGAFG00000011110	rad54l	100	79.056	ENSPPAG00000031222	RAD54L	91	79.056	Pan_paniscus
ENSGAFG00000011110	rad54l	100	78.351	ENSPPRG00000010317	RAD54L	91	78.351	Panthera_pardus
ENSGAFG00000011110	rad54l	100	78.351	ENSPTIG00000012200	RAD54L	91	78.351	Panthera_tigris_altaica
ENSGAFG00000011110	rad54l	100	78.909	ENSPTRG00000000689	RAD54L	91	78.909	Pan_troglodytes
ENSGAFG00000011110	rad54l	100	78.909	ENSPANG00000016295	RAD54L	96	78.909	Papio_anubis
ENSGAFG00000011110	rad54l	100	77.596	ENSPKIG00000016172	rad54l	91	77.596	Paramormyrops_kingsleyae
ENSGAFG00000011110	rad54l	99	80.120	ENSPSIG00000003258	RAD54L	91	80.120	Pelodiscus_sinensis
ENSGAFG00000011110	rad54l	100	77.926	ENSPMGG00000016335	rad54l	91	77.926	Periophthalmus_magnuspinnatus
ENSGAFG00000011110	rad54l	100	78.519	ENSPEMG00000011422	Rad54l	91	78.519	Peromyscus_maniculatus_bairdii
ENSGAFG00000011110	rad54l	92	73.892	ENSPMAG00000007719	rad54l	84	73.892	Petromyzon_marinus
ENSGAFG00000011110	rad54l	100	78.909	ENSPCIG00000029032	RAD54L	91	78.909	Phascolarctos_cinereus
ENSGAFG00000011110	rad54l	95	98.428	ENSPFOG00000013732	rad54l	100	98.428	Poecilia_formosa
ENSGAFG00000011110	rad54l	90	94.805	ENSPLAG00000023416	rad54l	99	94.805	Poecilia_latipinna
ENSGAFG00000011110	rad54l	100	98.068	ENSPMEG00000008299	rad54l	100	98.068	Poecilia_mexicana
ENSGAFG00000011110	rad54l	100	97.177	ENSPREG00000019955	rad54l	91	97.177	Poecilia_reticulata
ENSGAFG00000011110	rad54l	93	77.184	ENSPPYG00000001398	RAD54L	90	77.184	Pongo_abelii
ENSGAFG00000011110	rad54l	78	87.234	ENSPCAG00000005323	RAD54L	71	87.234	Procavia_capensis
ENSGAFG00000011110	rad54l	100	78.614	ENSPCOG00000015423	RAD54L	91	78.614	Propithecus_coquereli
ENSGAFG00000011110	rad54l	99	79.883	ENSPNYG00000002942	rad54l	90	79.883	Pundamilia_nyererei
ENSGAFG00000011110	rad54l	100	83.704	ENSPNAG00000012483	rad54l	91	83.704	Pygocentrus_nattereri
ENSGAFG00000011110	rad54l	100	77.876	ENSRNOG00000013148	Rad54l	91	77.876	Rattus_norvegicus
ENSGAFG00000011110	rad54l	100	78.909	ENSRBIG00000043495	RAD54L	91	78.909	Rhinopithecus_bieti
ENSGAFG00000011110	rad54l	100	78.909	ENSRROG00000020844	RAD54L	91	78.909	Rhinopithecus_roxellana
ENSGAFG00000011110	rad54l	80	51.295	YGL163C	RAD54	64	51.468	Saccharomyces_cerevisiae
ENSGAFG00000011110	rad54l	100	79.056	ENSSBOG00000024672	RAD54L	91	79.056	Saimiri_boliviensis_boliviensis
ENSGAFG00000011110	rad54l	100	78.676	ENSSHAG00000000110	RAD54L	91	78.676	Sarcophilus_harrisii
ENSGAFG00000011110	rad54l	100	87.685	ENSSDUG00000019147	rad54l	91	87.685	Seriola_dumerili
ENSGAFG00000011110	rad54l	100	87.389	ENSSLDG00000012330	rad54l	91	87.389	Seriola_lalandi_dorsalis
ENSGAFG00000011110	rad54l	92	76.565	ENSSARG00000006689	RAD54L	100	76.565	Sorex_araneus
ENSGAFG00000011110	rad54l	100	86.350	ENSSPAG00000011016	rad54l	91	86.350	Stegastes_partitus
ENSGAFG00000011110	rad54l	100	79.204	ENSSSCG00000003905	RAD54L	91	79.204	Sus_scrofa
ENSGAFG00000011110	rad54l	99	79.499	ENSTGUG00000008233	RAD54L	91	79.649	Taeniopygia_guttata
ENSGAFG00000011110	rad54l	99	80.684	ENSTRUG00000008410	rad54l	91	80.684	Takifugu_rubripes
ENSGAFG00000011110	rad54l	99	78.900	ENSTNIG00000004716	rad54l	91	79.080	Tetraodon_nigroviridis
ENSGAFG00000011110	rad54l	100	73.746	ENSTTRG00000006315	RAD54L	91	73.746	Tursiops_truncatus
ENSGAFG00000011110	rad54l	99	78.455	ENSUAMG00000011824	RAD54L	90	78.455	Ursus_americanus
ENSGAFG00000011110	rad54l	99	77.117	ENSUMAG00000023603	RAD54L	90	77.117	Ursus_maritimus
ENSGAFG00000011110	rad54l	100	78.761	ENSVVUG00000007201	RAD54L	91	78.761	Vulpes_vulpes
ENSGAFG00000011110	rad54l	96	75.193	ENSXETG00000004369	rad54l	91	75.193	Xenopus_tropicalis
ENSGAFG00000011110	rad54l	60	95.577	ENSXCOG00000016028	rad54l	85	95.630	Xiphophorus_couchianus