EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000011174 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12232 bases
Position: chrNHOQ01000160.1:224286-236517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	1	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	2	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	3	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	4	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	5	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	6	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	7	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	8	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	9	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	10	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	11	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	12	13
ENSGAFP00000016543	zf-C2H2	PF00096.26	5.5e-66	13	13
ENSGAFP00000016543	zf-met	PF12874.7	4.1e-18	1	3
ENSGAFP00000016543	zf-met	PF12874.7	4.1e-18	2	3
ENSGAFP00000016543	zf-met	PF12874.7	4.1e-18	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000016701	-	5962	-	ENSGAFP00000016543	687 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000011174	-	88	41.429	ENSGAFG00000021891	znf319b	87	41.429
ENSGAFG00000011174	-	63	46.875	ENSGAFG00000011278	-	61	46.875
ENSGAFG00000011174	-	65	46.988	ENSGAFG00000018645	-	79	46.012
ENSGAFG00000011174	-	61	48.544	ENSGAFG00000011913	si:ch211-161m3.4	75	46.635
ENSGAFG00000011174	-	78	48.214	ENSGAFG00000020499	-	61	48.214
ENSGAFG00000011174	-	89	44.099	ENSGAFG00000013491	-	68	44.099
ENSGAFG00000011174	-	63	45.399	ENSGAFG00000018422	-	53	45.399
ENSGAFG00000011174	-	75	44.361	ENSGAFG00000011998	-	56	44.361
ENSGAFG00000011174	-	74	46.012	ENSGAFG00000011999	-	97	46.012
ENSGAFG00000011174	-	64	43.478	ENSGAFG00000013069	-	64	43.478
ENSGAFG00000011174	-	62	43.411	ENSGAFG00000013066	-	65	43.411
ENSGAFG00000011174	-	82	46.715	ENSGAFG00000012004	-	53	46.715
ENSGAFG00000011174	-	76	42.500	ENSGAFG00000012945	-	59	42.056
ENSGAFG00000011174	-	61	42.945	ENSGAFG00000012733	-	54	42.945
ENSGAFG00000011174	-	66	35.032	ENSGAFG00000015673	PRDM15	57	35.032
ENSGAFG00000011174	-	79	47.826	ENSGAFG00000011924	-	65	48.466
ENSGAFG00000011174	-	74	45.685	ENSGAFG00000010637	-	95	46.012
ENSGAFG00000011174	-	85	46.626	ENSGAFG00000001402	-	76	46.626
ENSGAFG00000011174	-	62	53.750	ENSGAFG00000013839	-	50	54.545
ENSGAFG00000011174	-	87	38.372	ENSGAFG00000013767	-	50	38.372
ENSGAFG00000011174	-	62	42.945	ENSGAFG00000013116	-	54	42.945
ENSGAFG00000011174	-	75	37.500	ENSGAFG00000021427	snai2	66	37.500
ENSGAFG00000011174	-	63	42.063	ENSGAFG00000005321	zbtb47b	81	39.231
ENSGAFG00000011174	-	89	50.980	ENSGAFG00000019925	sall4	61	50.980
ENSGAFG00000011174	-	65	38.835	ENSGAFG00000021126	-	56	38.835
ENSGAFG00000011174	-	86	47.170	ENSGAFG00000014188	-	99	43.172
ENSGAFG00000011174	-	87	42.391	ENSGAFG00000013396	-	78	44.172
ENSGAFG00000011174	-	79	47.887	ENSGAFG00000013019	-	96	43.165
ENSGAFG00000011174	-	97	50.000	ENSGAFG00000012767	-	89	50.000
ENSGAFG00000011174	-	75	44.056	ENSGAFG00000013006	-	68	44.720
ENSGAFG00000011174	-	86	43.810	ENSGAFG00000013911	-	98	41.667
ENSGAFG00000011174	-	89	41.634	ENSGAFG00000017761	-	89	42.023
ENSGAFG00000011174	-	94	38.806	ENSGAFG00000012934	-	78	36.620
ENSGAFG00000011174	-	88	50.667	ENSGAFG00000013363	-	76	50.667
ENSGAFG00000011174	-	86	45.794	ENSGAFG00000012069	-	98	52.500
ENSGAFG00000011174	-	71	42.735	ENSGAFG00000007110	-	73	43.243
ENSGAFG00000011174	-	64	38.961	ENSGAFG00000008457	zbtb41	66	39.683
ENSGAFG00000011174	-	64	51.685	ENSGAFG00000000285	si:dkeyp-113d7.1	50	51.685
ENSGAFG00000011174	-	62	47.205	ENSGAFG00000008204	-	86	47.205
ENSGAFG00000011174	-	63	44.242	ENSGAFG00000013048	-	68	44.242
ENSGAFG00000011174	-	97	46.377	ENSGAFG00000011326	-	99	46.930
ENSGAFG00000011174	-	62	45.122	ENSGAFG00000020505	-	88	44.681
ENSGAFG00000011174	-	66	50.000	ENSGAFG00000020501	-	53	50.000
ENSGAFG00000011174	-	84	50.485	ENSGAFG00000013420	-	69	50.485
ENSGAFG00000011174	-	65	41.420	ENSGAFG00000020507	-	52	41.212
ENSGAFG00000011174	-	78	45.556	ENSGAFG00000020509	-	88	40.845
ENSGAFG00000011174	-	88	41.905	ENSGAFG00000008226	-	73	42.945
ENSGAFG00000011174	-	92	45.455	ENSGAFG00000012977	-	89	45.455
ENSGAFG00000011174	-	93	44.177	ENSGAFG00000013677	-	97	44.172
ENSGAFG00000011174	-	77	44.172	ENSGAFG00000011906	-	65	44.172
ENSGAFG00000011174	-	68	36.538	ENSGAFG00000019233	prdm5	82	36.538
ENSGAFG00000011174	-	64	47.619	ENSGAFG00000014362	-	59	47.619
ENSGAFG00000011174	-	78	50.000	ENSGAFG00000016981	-	75	50.000
ENSGAFG00000011174	-	85	41.350	ENSGAFG00000014085	-	72	44.099
ENSGAFG00000011174	-	67	48.447	ENSGAFG00000011288	-	78	48.447
ENSGAFG00000011174	-	62	41.964	ENSGAFG00000016637	gfi1ab	50	42.202
ENSGAFG00000011174	-	88	46.835	ENSGAFG00000012035	-	91	44.970
ENSGAFG00000011174	-	72	43.902	ENSGAFG00000013969	-	96	45.000
ENSGAFG00000011174	-	61	45.370	ENSGAFG00000007528	-	53	45.370
ENSGAFG00000011174	-	81	46.914	ENSGAFG00000016093	-	80	46.914
ENSGAFG00000011174	-	73	45.399	ENSGAFG00000007104	-	76	45.399
ENSGAFG00000011174	-	78	42.358	ENSGAFG00000013624	-	70	42.358
ENSGAFG00000011174	-	66	45.926	ENSGAFG00000011944	-	59	45.926
ENSGAFG00000011174	-	68	48.428	ENSGAFG00000011940	-	70	48.428
ENSGAFG00000011174	-	85	44.966	ENSGAFG00000008274	-	98	44.172
ENSGAFG00000011174	-	70	36.111	ENSGAFG00000009650	-	67	36.634
ENSGAFG00000011174	-	87	43.478	ENSGAFG00000013457	-	59	43.478
ENSGAFG00000011174	-	72	45.415	ENSGAFG00000013452	-	78	45.415
ENSGAFG00000011174	-	90	44.000	ENSGAFG00000014097	-	71	44.000
ENSGAFG00000011174	-	85	42.000	ENSGAFG00000002659	-	64	41.339
ENSGAFG00000011174	-	76	45.333	ENSGAFG00000001481	-	94	46.988
ENSGAFG00000011174	-	77	40.411	ENSGAFG00000005337	-	72	42.727
ENSGAFG00000011174	-	76	44.828	ENSGAFG00000000266	-	84	44.828
ENSGAFG00000011174	-	72	39.623	ENSGAFG00000014369	-	99	43.421
ENSGAFG00000011174	-	73	46.875	ENSGAFG00000021131	-	93	50.000
ENSGAFG00000011174	-	86	44.186	ENSGAFG00000021132	-	62	49.645
ENSGAFG00000011174	-	86	49.533	ENSGAFG00000021139	-	99	49.533
ENSGAFG00000011174	-	72	46.541	ENSGAFG00000016347	znf668	91	46.541
ENSGAFG00000011174	-	86	46.541	ENSGAFG00000018820	-	89	46.541
ENSGAFG00000011174	-	74	48.810	ENSGAFG00000016976	-	69	48.810
ENSGAFG00000011174	-	85	53.750	ENSGAFG00000013471	-	71	53.750
ENSGAFG00000011174	-	75	44.030	ENSGAFG00000001879	-	66	43.511
ENSGAFG00000011174	-	71	38.095	ENSGAFG00000003119	-	66	38.095
ENSGAFG00000011174	-	89	40.637	ENSGAFG00000012987	-	68	40.637
ENSGAFG00000011174	-	87	45.783	ENSGAFG00000013616	-	73	45.783
ENSGAFG00000011174	-	78	47.260	ENSGAFG00000014563	-	68	47.260
ENSGAFG00000011174	-	78	44.720	ENSGAFG00000001156	-	84	44.172
ENSGAFG00000011174	-	85	50.000	ENSGAFG00000018659	-	99	50.000
ENSGAFG00000011174	-	94	48.780	ENSGAFG00000013408	-	96	48.780
ENSGAFG00000011174	-	85	51.111	ENSGAFG00000011965	-	79	51.724
ENSGAFG00000011174	-	62	42.857	ENSGAFG00000003059	gfi1b	72	43.119
ENSGAFG00000011174	-	91	43.781	ENSGAFG00000013390	-	96	43.949
ENSGAFG00000011174	-	82	42.857	ENSGAFG00000013055	-	83	42.857
ENSGAFG00000011174	-	76	44.172	ENSGAFG00000014413	-	86	44.172
ENSGAFG00000011174	-	69	41.566	ENSGAFG00000014410	-	88	41.718
ENSGAFG00000011174	-	87	43.421	ENSGAFG00000014419	-	60	45.455
ENSGAFG00000011174	-	85	50.000	ENSGAFG00000011884	-	95	48.466
ENSGAFG00000011174	-	85	50.000	ENSGAFG00000003150	-	94	51.282
ENSGAFG00000011174	-	90	46.212	ENSGAFG00000013934	-	98	44.444
ENSGAFG00000011174	-	60	50.000	ENSGAFG00000018663	-	60	43.548
ENSGAFG00000011174	-	69	40.606	ENSGAFG00000013430	-	83	40.606
ENSGAFG00000011174	-	74	45.833	ENSGAFG00000013438	-	85	46.739
ENSGAFG00000011174	-	80	47.552	ENSGAFG00000008231	-	87	44.922
ENSGAFG00000011174	-	88	42.593	ENSGAFG00000011938	-	63	47.826
ENSGAFG00000011174	-	75	49.080	ENSGAFG00000016587	-	86	49.080
ENSGAFG00000011174	-	80	41.304	ENSGAFG00000010983	-	94	42.254
ENSGAFG00000011174	-	89	46.061	ENSGAFG00000018302	-	79	46.061
ENSGAFG00000011174	-	63	38.971	ENSGAFG00000011290	-	59	38.971
ENSGAFG00000011174	-	61	43.119	ENSGAFG00000011287	-	55	43.119
ENSGAFG00000011174	-	86	43.629	ENSGAFG00000016595	-	93	43.629
ENSGAFG00000011174	-	71	42.623	ENSGAFG00000013053	-	65	42.623
ENSGAFG00000011174	-	89	37.500	ENSGAFG00000012953	-	87	45.399
ENSGAFG00000011174	-	77	37.500	ENSGAFG00000007636	scrt1b	53	37.500
ENSGAFG00000011174	-	95	42.857	ENSGAFG00000016322	-	72	42.857
ENSGAFG00000011174	-	63	44.186	ENSGAFG00000007532	-	70	44.186
ENSGAFG00000011174	-	75	47.853	ENSGAFG00000007098	-	85	47.853
ENSGAFG00000011174	-	74	49.091	ENSGAFG00000013000	-	59	45.399
ENSGAFG00000011174	-	97	44.444	ENSGAFG00000017066	-	65	44.444
ENSGAFG00000011174	-	85	46.012	ENSGAFG00000019072	-	99	46.725
ENSGAFG00000011174	-	65	42.667	ENSGAFG00000000345	si:dkey-89b17.4	61	42.667
ENSGAFG00000011174	-	92	40.881	ENSGAFG00000003108	-	82	38.922
ENSGAFG00000011174	-	80	41.778	ENSGAFG00000013462	-	88	41.778
ENSGAFG00000011174	-	66	49.515	ENSGAFG00000014088	-	66	49.515
ENSGAFG00000011174	-	71	46.226	ENSGAFG00000000521	-	70	46.226
ENSGAFG00000011174	-	71	44.910	ENSGAFG00000012083	-	51	44.910
ENSGAFG00000011174	-	82	48.000	ENSGAFG00000000037	-	67	47.853
ENSGAFG00000011174	-	88	42.049	ENSGAFG00000021140	-	100	42.049
ENSGAFG00000011174	-	70	47.436	ENSGAFG00000021143	-	72	47.436
ENSGAFG00000011174	-	89	46.012	ENSGAFG00000013605	-	94	46.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011174	-	94	85.492	ENSAPOG00000002213	-	100	78.242	Acanthochromis_polyacanthus
ENSGAFG00000011174	-	85	86.713	ENSACIG00000013163	-	88	86.713	Amphilophus_citrinellus
ENSGAFG00000011174	-	71	44.444	ENSACIG00000013149	-	88	44.099	Amphilophus_citrinellus
ENSGAFG00000011174	-	100	77.986	ENSAOCG00000013124	-	100	78.273	Amphiprion_ocellaris
ENSGAFG00000011174	-	100	78.098	ENSAPEG00000009997	-	100	78.386	Amphiprion_percula
ENSGAFG00000011174	-	85	94.466	ENSATEG00000004127	-	98	94.466	Anabas_testudineus
ENSGAFG00000011174	-	100	76.218	ENSACLG00000005708	-	99	76.538	Astatotilapia_calliptera
ENSGAFG00000011174	-	90	80.896	ENSCVAG00000014734	-	99	80.597	Cyprinodon_variegatus
ENSGAFG00000011174	-	63	90.361	ENSFHEG00000014060	-	71	90.361	Fundulus_heteroclitus
ENSGAFG00000011174	-	89	71.429	ENSGMOG00000017526	-	94	71.429	Gadus_morhua
ENSGAFG00000011174	-	94	92.917	ENSGACG00000019550	-	86	92.917	Gasterosteus_aculeatus
ENSGAFG00000011174	-	100	76.074	ENSHBUG00000006662	-	99	76.395	Haplochromis_burtoni
ENSGAFG00000011174	-	66	83.636	ENSHCOG00000003041	-	96	83.636	Hippocampus_comes
ENSGAFG00000011174	-	100	77.522	ENSKMAG00000009979	-	99	77.522	Kryptolebias_marmoratus
ENSGAFG00000011174	-	87	90.377	ENSLBEG00000010165	-	89	90.377	Labrus_bergylta
ENSGAFG00000011174	-	95	87.273	ENSMAMG00000006312	-	100	87.273	Mastacembelus_armatus
ENSGAFG00000011174	-	100	76.218	ENSMZEG00005013913	-	99	76.538	Maylandia_zebra
ENSGAFG00000011174	-	85	94.488	ENSMMOG00000011282	-	99	86.747	Mola_mola
ENSGAFG00000011174	-	100	75.902	ENSMALG00000000494	-	100	75.902	Monopterus_albus
ENSGAFG00000011174	-	74	83.582	ENSNBRG00000007602	-	98	83.582	Neolamprologus_brichardi
ENSGAFG00000011174	-	85	57.401	ENSONIG00000003856	-	100	47.561	Oreochromis_niloticus
ENSGAFG00000011174	-	100	74.638	ENSORLG00000010117	-	100	74.638	Oryzias_latipes
ENSGAFG00000011174	-	100	74.783	ENSORLG00020000219	-	100	74.783	Oryzias_latipes_hni
ENSGAFG00000011174	-	87	90.972	ENSORLG00015000258	-	92	95.918	Oryzias_latipes_hsok
ENSGAFG00000011174	-	90	88.346	ENSOMEG00000018262	-	97	88.519	Oryzias_melastigma
ENSGAFG00000011174	-	90	53.100	ENSPFOG00000013455	-	100	63.047	Poecilia_formosa
ENSGAFG00000011174	-	95	93.610	ENSPLAG00000004027	-	93	93.610	Poecilia_latipinna
ENSGAFG00000011174	-	100	94.469	ENSPMEG00000007589	-	100	94.469	Poecilia_mexicana
ENSGAFG00000011174	-	92	94.853	ENSPREG00000000153	-	90	94.853	Poecilia_reticulata
ENSGAFG00000011174	-	87	89.513	ENSPNYG00000007814	-	93	89.513	Pundamilia_nyererei
ENSGAFG00000011174	-	89	36.715	ENSPNYG00000007781	-	99	43.452	Pundamilia_nyererei
ENSGAFG00000011174	-	95	81.333	ENSSMAG00000021251	-	96	85.259	Scophthalmus_maximus
ENSGAFG00000011174	-	99	78.035	ENSSDUG00000013904	-	99	78.035	Seriola_dumerili
ENSGAFG00000011174	-	91	94.118	ENSSLDG00000006994	-	95	94.118	Seriola_lalandi_dorsalis
ENSGAFG00000011174	-	100	78.499	ENSSPAG00000011524	-	100	78.355	Stegastes_partitus
ENSGAFG00000011174	-	94	87.143	ENSTRUG00000015687	-	98	89.394	Takifugu_rubripes
ENSGAFG00000011174	-	86	93.952	ENSTNIG00000008242	-	99	93.952	Tetraodon_nigroviridis
ENSGAFG00000011174	-	92	90.813	ENSXCOG00000015947	-	99	99.237	Xiphophorus_couchianus
ENSGAFG00000011174	-	100	96.361	ENSXMAG00000023291	-	100	96.361	Xiphophorus_maculatus