EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000011430 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8546 bases
Position: chrNHOQ01000204.1:1752615-1761160
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000016940	KH_1	PF00013.29	4.7e-47	1	3
ENSGAFP00000016940	KH_1	PF00013.29	4.7e-47	2	3
ENSGAFP00000016940	KH_1	PF00013.29	4.7e-47	3	3
ENSGAFP00000016940	KH_2	PF07650.17	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017104	-	1038	-	ENSGAFP00000016940	345 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000011430	pcbp3	63	52.857	ENSGAFG00000012633	hnrpkl	50	52.857
ENSGAFG00000011430	pcbp3	81	65.179	ENSGAFG00000017864	zgc:110045	91	65.179
ENSGAFG00000011430	pcbp3	94	70.245	ENSGAFG00000007972	pcbp2	96	69.301
ENSGAFG00000011430	pcbp3	94	70.213	ENSGAFG00000013273	PCBP2	96	70.213
ENSGAFG00000011430	pcbp3	59	74.172	ENSGAFG00000018301	pcbp4	63	74.172
ENSGAFG00000011430	pcbp3	96	86.186	ENSGAFG00000010274	-	95	86.186
ENSGAFG00000011430	pcbp3	94	59.821	ENSGAFG00000021090	-	70	59.821
ENSGAFG00000011430	pcbp3	57	38.095	ENSGAFG00000010469	khsrp	51	38.095
ENSGAFG00000011430	pcbp3	68	36.000	ENSGAFG00000020972	fubp1	54	37.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011430	pcbp3	99	86.550	ENSAPOG00000016582	-	100	86.550	Acanthochromis_polyacanthus
ENSGAFG00000011430	pcbp3	99	87.572	ENSAPOG00000020003	pcbp3	91	87.572	Acanthochromis_polyacanthus
ENSGAFG00000011430	pcbp3	95	82.456	ENSAMEG00000001697	-	97	82.456	Ailuropoda_melanoleuca
ENSGAFG00000011430	pcbp3	99	86.804	ENSACIG00000002739	-	100	86.804	Amphilophus_citrinellus
ENSGAFG00000011430	pcbp3	96	96.061	ENSACIG00000010933	pcbp3	95	96.061	Amphilophus_citrinellus
ENSGAFG00000011430	pcbp3	88	84.494	ENSAOCG00000007806	-	100	84.494	Amphiprion_ocellaris
ENSGAFG00000011430	pcbp3	96	88.955	ENSAOCG00000008592	-	98	88.955	Amphiprion_ocellaris
ENSGAFG00000011430	pcbp3	99	85.673	ENSAPEG00000005209	-	100	85.673	Amphiprion_percula
ENSGAFG00000011430	pcbp3	96	95.224	ENSAPEG00000008011	pcbp3	95	95.224	Amphiprion_percula
ENSGAFG00000011430	pcbp3	96	96.970	ENSATEG00000015787	-	100	96.970	Anabas_testudineus
ENSGAFG00000011430	pcbp3	99	85.924	ENSATEG00000009833	-	100	85.924	Anabas_testudineus
ENSGAFG00000011430	pcbp3	94	76.204	ENSAPLG00000008951	-	79	76.204	Anas_platyrhynchos
ENSGAFG00000011430	pcbp3	95	81.159	ENSAPLG00000002975	-	97	81.159	Anas_platyrhynchos
ENSGAFG00000011430	pcbp3	95	82.175	ENSACAG00000009819	-	96	82.175	Anolis_carolinensis
ENSGAFG00000011430	pcbp3	95	86.325	ENSACAG00000004607	-	97	86.325	Anolis_carolinensis
ENSGAFG00000011430	pcbp3	74	86.909	ENSANAG00000030702	-	98	86.909	Aotus_nancymaae
ENSGAFG00000011430	pcbp3	96	94.925	ENSACLG00000011835	pcbp3	95	94.925	Astatotilapia_calliptera
ENSGAFG00000011430	pcbp3	99	85.630	ENSACLG00000003801	-	100	85.630	Astatotilapia_calliptera
ENSGAFG00000011430	pcbp3	95	64.000	ENSAMXG00000001760	zgc:110045	73	64.000	Astyanax_mexicanus
ENSGAFG00000011430	pcbp3	96	85.152	ENSAMXG00000013588	-	100	85.152	Astyanax_mexicanus
ENSGAFG00000011430	pcbp3	96	93.093	ENSAMXG00000003440	pcbp3	95	93.093	Astyanax_mexicanus
ENSGAFG00000011430	pcbp3	88	82.143	ENSCAFG00020019472	-	77	86.636	Canis_lupus_dingo
ENSGAFG00000011430	pcbp3	97	83.680	ENSCSAG00000007440	-	89	83.680	Chlorocebus_sabaeus
ENSGAFG00000011430	pcbp3	94	85.583	ENSCPBG00000012151	-	97	80.057	Chrysemys_picta_bellii
ENSGAFG00000011430	pcbp3	94	82.012	ENSCPBG00000000733	-	73	82.012	Chrysemys_picta_bellii
ENSGAFG00000011430	pcbp3	97	71.745	ENSCSEG00000016984	-	98	71.745	Cynoglossus_semilaevis
ENSGAFG00000011430	pcbp3	96	87.952	ENSCSEG00000000822	pcbp3	99	87.952	Cynoglossus_semilaevis
ENSGAFG00000011430	pcbp3	96	94.925	ENSCVAG00000014482	pcbp3	95	94.925	Cyprinodon_variegatus
ENSGAFG00000011430	pcbp3	99	84.795	ENSCVAG00000005262	-	100	84.795	Cyprinodon_variegatus
ENSGAFG00000011430	pcbp3	99	91.570	ENSDARG00000054378	pcbp3	100	91.570	Danio_rerio
ENSGAFG00000011430	pcbp3	95	73.112	ENSETEG00000015988	-	97	73.112	Echinops_telfairi
ENSGAFG00000011430	pcbp3	85	68.581	ENSEBUG00000016192	pcbp3	99	69.072	Eptatretus_burgeri
ENSGAFG00000011430	pcbp3	71	61.811	ENSEBUG00000005495	pcbp3	68	61.811	Eptatretus_burgeri
ENSGAFG00000011430	pcbp3	95	70.659	ENSEBUG00000007485	-	92	68.182	Eptatretus_burgeri
ENSGAFG00000011430	pcbp3	96	86.486	ENSELUG00000001560	-	96	84.928	Esox_lucius
ENSGAFG00000011430	pcbp3	96	93.750	ENSELUG00000003521	pcbp3	95	93.750	Esox_lucius
ENSGAFG00000011430	pcbp3	95	84.290	ENSFALG00000003949	-	97	84.290	Ficedula_albicollis
ENSGAFG00000011430	pcbp3	94	76.487	ENSFALG00000004411	-	74	76.487	Ficedula_albicollis
ENSGAFG00000011430	pcbp3	99	85.088	ENSFHEG00000006539	-	100	85.088	Fundulus_heteroclitus
ENSGAFG00000011430	pcbp3	97	89.521	ENSFHEG00000016615	pcbp3	96	89.521	Fundulus_heteroclitus
ENSGAFG00000011430	pcbp3	95	72.753	ENSGMOG00000011992	pcbp3	96	72.829	Gadus_morhua
ENSGAFG00000011430	pcbp3	95	65.254	ENSGMOG00000008611	-	100	65.254	Gadus_morhua
ENSGAFG00000011430	pcbp3	98	80.352	ENSGALG00000013155	-	99	82.875	Gallus_gallus
ENSGAFG00000011430	pcbp3	95	85.960	ENSGALG00000004394	-	97	85.960	Gallus_gallus
ENSGAFG00000011430	pcbp3	96	80.737	ENSGACG00000002266	-	96	80.737	Gasterosteus_aculeatus
ENSGAFG00000011430	pcbp3	99	78.571	ENSGACG00000014955	-	100	78.571	Gasterosteus_aculeatus
ENSGAFG00000011430	pcbp3	84	81.379	ENSGAGG00000000271	-	100	81.379	Gopherus_agassizii
ENSGAFG00000011430	pcbp3	77	86.385	ENSGAGG00000006956	-	86	86.385	Gopherus_agassizii
ENSGAFG00000011430	pcbp3	99	85.630	ENSHBUG00000021782	-	100	85.630	Haplochromis_burtoni
ENSGAFG00000011430	pcbp3	96	94.627	ENSHBUG00000010697	pcbp3	95	94.627	Haplochromis_burtoni
ENSGAFG00000011430	pcbp3	99	80.523	ENSHCOG00000006067	-	100	80.523	Hippocampus_comes
ENSGAFG00000011430	pcbp3	96	95.210	ENSHCOG00000017868	pcbp3	95	95.210	Hippocampus_comes
ENSGAFG00000011430	pcbp3	99	90.698	ENSIPUG00000006238	pcbp3	100	90.698	Ictalurus_punctatus
ENSGAFG00000011430	pcbp3	96	94.925	ENSKMAG00000003046	pcbp3	95	94.925	Kryptolebias_marmoratus
ENSGAFG00000011430	pcbp3	96	85.285	ENSKMAG00000018530	-	100	81.818	Kryptolebias_marmoratus
ENSGAFG00000011430	pcbp3	99	74.194	ENSLBEG00000006542	-	100	76.540	Labrus_bergylta
ENSGAFG00000011430	pcbp3	100	86.667	ENSLBEG00000006201	pcbp3	99	86.667	Labrus_bergylta
ENSGAFG00000011430	pcbp3	94	76.286	ENSLACG00000010804	zgc:110045	74	76.286	Latimeria_chalumnae
ENSGAFG00000011430	pcbp3	93	85.345	ENSLACG00000010386	pcbp3	73	85.345	Latimeria_chalumnae
ENSGAFG00000011430	pcbp3	97	90.504	ENSLOCG00000009369	pcbp3	99	90.504	Lepisosteus_oculatus
ENSGAFG00000011430	pcbp3	93	82.154	ENSLOCG00000005058	zgc:110045	79	82.154	Lepisosteus_oculatus
ENSGAFG00000011430	pcbp3	97	89.790	ENSMAMG00000022336	pcbp3	94	89.790	Mastacembelus_armatus
ENSGAFG00000011430	pcbp3	99	84.751	ENSMAMG00000011620	-	100	84.751	Mastacembelus_armatus
ENSGAFG00000011430	pcbp3	96	86.061	ENSMZEG00005014882	-	95	86.186	Maylandia_zebra
ENSGAFG00000011430	pcbp3	96	95.796	ENSMZEG00005008993	pcbp3	98	94.910	Maylandia_zebra
ENSGAFG00000011430	pcbp3	94	76.301	ENSMGAG00000001883	-	95	76.301	Meleagris_gallopavo
ENSGAFG00000011430	pcbp3	94	76.487	ENSMGAG00000006794	-	74	76.487	Meleagris_gallopavo
ENSGAFG00000011430	pcbp3	97	86.567	ENSMMOG00000005216	-	98	86.567	Mola_mola
ENSGAFG00000011430	pcbp3	96	87.390	ENSMMOG00000000730	pcbp3	88	87.390	Mola_mola
ENSGAFG00000011430	pcbp3	73	86.111	ENSMODG00000027884	-	94	86.111	Monodelphis_domestica
ENSGAFG00000011430	pcbp3	98	94.412	ENSMALG00000000691	pcbp3	98	94.412	Monopterus_albus
ENSGAFG00000011430	pcbp3	95	77.586	ENSMPUG00000001779	-	89	77.586	Mustela_putorius_furo
ENSGAFG00000011430	pcbp3	98	86.957	ENSNBRG00000016714	-	98	86.957	Neolamprologus_brichardi
ENSGAFG00000011430	pcbp3	96	96.364	ENSNBRG00000016409	-	95	96.364	Neolamprologus_brichardi
ENSGAFG00000011430	pcbp3	93	85.965	ENSOPRG00000003431	-	99	85.965	Ochotona_princeps
ENSGAFG00000011430	pcbp3	99	84.593	ENSONIG00000004611	-	100	84.593	Oreochromis_niloticus
ENSGAFG00000011430	pcbp3	96	89.859	ENSONIG00000012122	-	98	89.859	Oreochromis_niloticus
ENSGAFG00000011430	pcbp3	95	83.988	ENSOCUG00000002696	-	88	83.988	Oryctolagus_cuniculus
ENSGAFG00000011430	pcbp3	99	84.593	ENSORLG00000022739	-	100	84.593	Oryzias_latipes
ENSGAFG00000011430	pcbp3	96	88.889	ENSORLG00000000059	pcbp3	100	88.889	Oryzias_latipes
ENSGAFG00000011430	pcbp3	96	88.889	ENSORLG00020012671	pcbp3	97	88.889	Oryzias_latipes_hni
ENSGAFG00000011430	pcbp3	99	85.337	ENSORLG00020006124	-	100	85.337	Oryzias_latipes_hni
ENSGAFG00000011430	pcbp3	96	88.889	ENSORLG00015000429	pcbp3	97	88.889	Oryzias_latipes_hsok
ENSGAFG00000011430	pcbp3	96	86.186	ENSORLG00015008051	-	95	86.186	Oryzias_latipes_hsok
ENSGAFG00000011430	pcbp3	86	92.256	ENSOMEG00000020811	pcbp3	95	92.256	Oryzias_melastigma
ENSGAFG00000011430	pcbp3	97	86.269	ENSOMEG00000020162	-	98	86.269	Oryzias_melastigma
ENSGAFG00000011430	pcbp3	95	78.212	ENSOGAG00000008044	-	97	78.212	Otolemur_garnettii
ENSGAFG00000011430	pcbp3	76	78.261	ENSPKIG00000020913	-	91	78.261	Paramormyrops_kingsleyae
ENSGAFG00000011430	pcbp3	99	84.751	ENSPKIG00000019329	pcbp3	100	84.751	Paramormyrops_kingsleyae
ENSGAFG00000011430	pcbp3	72	84.615	ENSPSIG00000008350	-	68	84.615	Pelodiscus_sinensis
ENSGAFG00000011430	pcbp3	95	72.414	ENSPSIG00000014970	-	97	72.989	Pelodiscus_sinensis
ENSGAFG00000011430	pcbp3	98	92.982	ENSPMGG00000022383	pcbp3	98	92.982	Periophthalmus_magnuspinnatus
ENSGAFG00000011430	pcbp3	70	81.915	ENSPMAG00000004637	-	97	81.915	Petromyzon_marinus
ENSGAFG00000011430	pcbp3	94	64.985	ENSPMAG00000004551	pcbp3	88	64.985	Petromyzon_marinus
ENSGAFG00000011430	pcbp3	95	91.239	ENSPCIG00000028092	-	97	91.239	Phascolarctos_cinereus
ENSGAFG00000011430	pcbp3	96	83.430	ENSPLAG00000004074	-	91	83.430	Poecilia_latipinna
ENSGAFG00000011430	pcbp3	99	92.778	ENSPLAG00000011449	pcbp3	91	92.778	Poecilia_latipinna
ENSGAFG00000011430	pcbp3	99	96.802	ENSPMEG00000021239	pcbp3	92	98.605	Poecilia_mexicana
ENSGAFG00000011430	pcbp3	96	87.273	ENSPMEG00000006653	-	95	87.273	Poecilia_mexicana
ENSGAFG00000011430	pcbp3	96	91.867	ENSPREG00000015736	pcbp3	100	91.867	Poecilia_reticulata
ENSGAFG00000011430	pcbp3	97	86.567	ENSPREG00000020585	-	98	86.567	Poecilia_reticulata
ENSGAFG00000011430	pcbp3	96	88.955	ENSPNYG00000012326	pcbp3	96	88.955	Pundamilia_nyererei
ENSGAFG00000011430	pcbp3	99	85.630	ENSPNYG00000013205	-	100	85.630	Pundamilia_nyererei
ENSGAFG00000011430	pcbp3	99	85.174	ENSPNAG00000015104	pcbp3	100	85.174	Pygocentrus_nattereri
ENSGAFG00000011430	pcbp3	96	90.719	ENSPNAG00000008541	-	95	90.719	Pygocentrus_nattereri
ENSGAFG00000011430	pcbp3	95	84.592	ENSRNOG00000001245	Pcbp3	97	84.592	Rattus_norvegicus
ENSGAFG00000011430	pcbp3	97	76.694	ENSRBIG00000028177	-	99	76.694	Rhinopithecus_bieti
ENSGAFG00000011430	pcbp3	95	80.791	ENSSHAG00000007890	-	97	79.487	Sarcophilus_harrisii
ENSGAFG00000011430	pcbp3	96	92.793	ENSSFOG00015010205	pcbp3	100	92.793	Scleropages_formosus
ENSGAFG00000011430	pcbp3	94	76.923	ENSSFOG00015007118	-	93	76.923	Scleropages_formosus
ENSGAFG00000011430	pcbp3	96	91.291	ENSSFOG00015014706	pcbp3	95	91.291	Scleropages_formosus
ENSGAFG00000011430	pcbp3	99	85.044	ENSSMAG00000003135	-	100	85.044	Scophthalmus_maximus
ENSGAFG00000011430	pcbp3	96	90.030	ENSSMAG00000011929	pcbp3	98	90.030	Scophthalmus_maximus
ENSGAFG00000011430	pcbp3	96	87.273	ENSSDUG00000008502	-	95	87.273	Seriola_dumerili
ENSGAFG00000011430	pcbp3	96	96.096	ENSSDUG00000011608	pcbp3	99	96.096	Seriola_dumerili
ENSGAFG00000011430	pcbp3	96	86.787	ENSSLDG00000020161	-	95	86.787	Seriola_lalandi_dorsalis
ENSGAFG00000011430	pcbp3	96	96.096	ENSSLDG00000008518	pcbp3	99	96.096	Seriola_lalandi_dorsalis
ENSGAFG00000011430	pcbp3	94	77.746	ENSSPUG00000013214	-	100	79.430	Sphenodon_punctatus
ENSGAFG00000011430	pcbp3	96	84.545	ENSSPAG00000023341	-	95	84.545	Stegastes_partitus
ENSGAFG00000011430	pcbp3	88	84.494	ENSSPAG00000004190	-	100	84.494	Stegastes_partitus
ENSGAFG00000011430	pcbp3	95	77.904	ENSTGUG00000003316	-	97	77.904	Taeniopygia_guttata
ENSGAFG00000011430	pcbp3	95	78.550	ENSTGUG00000008158	-	97	78.550	Taeniopygia_guttata
ENSGAFG00000011430	pcbp3	96	90.964	ENSTRUG00000013604	pcbp3	95	90.964	Takifugu_rubripes
ENSGAFG00000011430	pcbp3	89	87.987	ENSTRUG00000006280	-	91	87.987	Takifugu_rubripes
ENSGAFG00000011430	pcbp3	95	84.046	ENSTTRG00000015075	-	97	84.046	Tursiops_truncatus
ENSGAFG00000011430	pcbp3	95	78.917	ENSXETG00000011483	pcbp1	97	78.917	Xenopus_tropicalis
ENSGAFG00000011430	pcbp3	89	76.807	ENSXETG00000010491	pcbp2	73	76.807	Xenopus_tropicalis
ENSGAFG00000011430	pcbp3	98	92.486	ENSXCOG00000020481	pcbp3	98	92.486	Xiphophorus_couchianus
ENSGAFG00000011430	pcbp3	97	86.176	ENSXMAG00000028711	-	98	87.059	Xiphophorus_maculatus
ENSGAFG00000011430	pcbp3	96	95.224	ENSXMAG00000008175	pcbp3	95	95.224	Xiphophorus_maculatus