EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000011486 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7150 bases
Position: chrNHOQ01000541.1:1372567-1379716
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017014	TruB_N	PF01509.18	1.3e-21	1	1
ENSGAFP00000017014	PUA	PF01472.20	1.6e-16	1	1
ENSGAFP00000017014	DKCLD	PF08068.12	5.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017178	-	2238	-	ENSGAFP00000017014	580 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011486	dkc1	74	80.455	ENSG00000130826	DKC1	99	87.317	Homo_sapiens
ENSGAFG00000011486	dkc1	83	87.551	ENSAPOG00000007799	dkc1	89	89.381	Acanthochromis_polyacanthus
ENSGAFG00000011486	dkc1	73	81.422	ENSAMEG00000002776	DKC1	86	81.422	Ailuropoda_melanoleuca
ENSGAFG00000011486	dkc1	80	88.578	ENSACIG00000022614	dkc1	87	90.255	Amphilophus_citrinellus
ENSGAFG00000011486	dkc1	84	87.195	ENSAOCG00000013159	dkc1	87	90.719	Amphiprion_ocellaris
ENSGAFG00000011486	dkc1	83	87.347	ENSAPEG00000002284	dkc1	88	90.719	Amphiprion_percula
ENSGAFG00000011486	dkc1	74	87.500	ENSATEG00000013682	dkc1	86	87.500	Anabas_testudineus
ENSGAFG00000011486	dkc1	83	76.986	ENSACAG00000015600	DKC1	85	76.735	Anolis_carolinensis
ENSGAFG00000011486	dkc1	77	78.959	ENSANAG00000022732	DKC1	85	80.682	Aotus_nancymaae
ENSGAFG00000011486	dkc1	80	87.500	ENSACLG00000015605	dkc1	88	88.915	Astatotilapia_calliptera
ENSGAFG00000011486	dkc1	77	85.275	ENSAMXG00000017108	dkc1	86	86.437	Astyanax_mexicanus
ENSGAFG00000011486	dkc1	73	80.778	ENSBTAG00000013045	DKC1	88	79.910	Bos_taurus
ENSGAFG00000011486	dkc1	70	64.865	WBGene00010478	K01G5.5	98	61.290	Caenorhabditis_elegans
ENSGAFG00000011486	dkc1	73	80.638	ENSCJAG00000004210	DKC1	85	80.638	Callithrix_jacchus
ENSGAFG00000011486	dkc1	76	78.700	ENSCAFG00000019620	-	79	83.455	Canis_familiaris
ENSGAFG00000011486	dkc1	76	71.106	ENSCAFG00000009311	-	96	67.284	Canis_familiaris
ENSGAFG00000011486	dkc1	72	71.991	ENSCAFG00020009379	-	92	66.598	Canis_lupus_dingo
ENSGAFG00000011486	dkc1	76	78.700	ENSCAFG00020008918	-	79	83.455	Canis_lupus_dingo
ENSGAFG00000011486	dkc1	73	80.778	ENSCHIG00000017392	DKC1	88	79.910	Capra_hircus
ENSGAFG00000011486	dkc1	80	77.489	ENSTSYG00000007681	DKC1	86	78.667	Carlito_syrichta
ENSGAFG00000011486	dkc1	68	81.818	ENSCAPG00000003342	DKC1	91	82.587	Cavia_aperea
ENSGAFG00000011486	dkc1	73	81.651	ENSCPOG00000008825	DKC1	85	81.651	Cavia_porcellus
ENSGAFG00000011486	dkc1	80	68.421	ENSCCAG00000027418	DKC1	84	71.136	Cebus_capucinus
ENSGAFG00000011486	dkc1	74	80.000	ENSCATG00000033602	DKC1	85	80.000	Cercocebus_atys
ENSGAFG00000011486	dkc1	73	80.594	ENSCLAG00000000720	DKC1	85	81.206	Chinchilla_lanigera
ENSGAFG00000011486	dkc1	74	80.227	ENSCSAG00000006706	DKC1	85	80.227	Chlorocebus_sabaeus
ENSGAFG00000011486	dkc1	74	81.106	ENSCPBG00000005858	DKC1	86	84.975	Chrysemys_picta_bellii
ENSGAFG00000011486	dkc1	69	79.198	ENSCING00000004599	-	83	75.229	Ciona_intestinalis
ENSGAFG00000011486	dkc1	67	79.795	ENSCSAVG00000010047	-	88	78.734	Ciona_savignyi
ENSGAFG00000011486	dkc1	74	80.227	ENSCANG00000027987	DKC1	85	80.227	Colobus_angolensis_palliatus
ENSGAFG00000011486	dkc1	80	58.099	ENSCGRG00001016789	-	89	57.955	Cricetulus_griseus_chok1gshd
ENSGAFG00000011486	dkc1	74	80.682	ENSCGRG00001014574	-	86	80.682	Cricetulus_griseus_chok1gshd
ENSGAFG00000011486	dkc1	74	80.682	ENSCGRG00000016075	-	86	80.682	Cricetulus_griseus_crigri
ENSGAFG00000011486	dkc1	84	55.918	ENSCGRG00000014809	-	87	58.691	Cricetulus_griseus_crigri
ENSGAFG00000011486	dkc1	81	85.439	ENSCSEG00000012633	dkc1	90	87.037	Cynoglossus_semilaevis
ENSGAFG00000011486	dkc1	83	93.946	ENSCVAG00000010155	dkc1	93	92.693	Cyprinodon_variegatus
ENSGAFG00000011486	dkc1	74	89.352	ENSDARG00000016484	dkc1	87	88.435	Danio_rerio
ENSGAFG00000011486	dkc1	74	80.682	ENSDNOG00000004218	DKC1	86	80.682	Dasypus_novemcinctus
ENSGAFG00000011486	dkc1	74	68.337	FBgn0259937	Nop60B	89	68.159	Drosophila_melanogaster
ENSGAFG00000011486	dkc1	73	78.182	ENSETEG00000016095	DKC1	89	78.182	Echinops_telfairi
ENSGAFG00000011486	dkc1	57	76.900	ENSEBUG00000015962	dkc1	98	81.100	Eptatretus_burgeri
ENSGAFG00000011486	dkc1	73	78.300	ENSEASG00005007484	DKC1	86	78.300	Equus_asinus_asinus
ENSGAFG00000011486	dkc1	73	78.300	ENSECAG00000023524	DKC1	86	78.300	Equus_caballus
ENSGAFG00000011486	dkc1	67	86.189	ENSEEUG00000003323	DKC1	99	81.604	Erinaceus_europaeus
ENSGAFG00000011486	dkc1	78	87.309	ENSELUG00000014538	dkc1	90	87.090	Esox_lucius
ENSGAFG00000011486	dkc1	73	80.645	ENSFCAG00000006577	DKC1	86	80.645	Felis_catus
ENSGAFG00000011486	dkc1	73	81.922	ENSFALG00000011496	DKC1	85	80.846	Ficedula_albicollis
ENSGAFG00000011486	dkc1	73	81.776	ENSFDAG00000002516	DKC1	88	80.876	Fukomys_damarensis
ENSGAFG00000011486	dkc1	77	94.183	ENSFHEG00000004627	dkc1	90	94.000	Fundulus_heteroclitus
ENSGAFG00000011486	dkc1	67	89.258	ENSGMOG00000017277	dkc1	100	89.258	Gadus_morhua
ENSGAFG00000011486	dkc1	72	83.217	ENSGALG00000005054	DKC1	86	81.348	Gallus_gallus
ENSGAFG00000011486	dkc1	68	93.418	ENSGACG00000004373	dkc1	96	94.225	Gasterosteus_aculeatus
ENSGAFG00000011486	dkc1	73	81.986	ENSGAGG00000011330	DKC1	84	82.217	Gopherus_agassizii
ENSGAFG00000011486	dkc1	74	80.455	ENSGGOG00000001045	DKC1	85	80.455	Gorilla_gorilla
ENSGAFG00000011486	dkc1	82	89.979	ENSHBUG00000012436	dkc1	90	90.487	Haplochromis_burtoni
ENSGAFG00000011486	dkc1	69	85.213	ENSHGLG00000000649	DKC1	85	80.092	Heterocephalus_glaber_female
ENSGAFG00000011486	dkc1	69	85.213	ENSHGLG00100001153	DKC1	86	80.092	Heterocephalus_glaber_male
ENSGAFG00000011486	dkc1	82	86.722	ENSHCOG00000021099	dkc1	85	89.977	Hippocampus_comes
ENSGAFG00000011486	dkc1	77	84.902	ENSIPUG00000010309	dkc1	85	85.714	Ictalurus_punctatus
ENSGAFG00000011486	dkc1	74	69.074	ENSSTOG00000011904	-	82	69.074	Ictidomys_tridecemlineatus
ENSGAFG00000011486	dkc1	74	79.864	ENSSTOG00000001074	-	90	79.864	Ictidomys_tridecemlineatus
ENSGAFG00000011486	dkc1	74	73.782	ENSSTOG00000020149	-	85	73.782	Ictidomys_tridecemlineatus
ENSGAFG00000011486	dkc1	77	89.509	ENSKMAG00000008010	dkc1	90	88.914	Kryptolebias_marmoratus
ENSGAFG00000011486	dkc1	78	90.110	ENSLBEG00000019122	dkc1	89	90.531	Labrus_bergylta
ENSGAFG00000011486	dkc1	74	81.293	ENSLACG00000014025	DKC1	90	86.329	Latimeria_chalumnae
ENSGAFG00000011486	dkc1	77	87.061	ENSLOCG00000013713	dkc1	88	89.623	Lepisosteus_oculatus
ENSGAFG00000011486	dkc1	73	80.682	ENSLAFG00000000221	DKC1	87	79.821	Loxodonta_africana
ENSGAFG00000011486	dkc1	82	74.451	ENSMFAG00000032398	DKC1	86	73.398	Macaca_fascicularis
ENSGAFG00000011486	dkc1	74	80.227	ENSMMUG00000005768	DKC1	85	80.227	Macaca_mulatta
ENSGAFG00000011486	dkc1	74	80.227	ENSMNEG00000034503	DKC1	85	80.227	Macaca_nemestrina
ENSGAFG00000011486	dkc1	74	80.227	ENSMLEG00000034422	DKC1	85	80.227	Mandrillus_leucophaeus
ENSGAFG00000011486	dkc1	71	93.204	ENSMAMG00000005427	dkc1	90	94.059	Mastacembelus_armatus
ENSGAFG00000011486	dkc1	82	90.188	ENSMZEG00005014503	dkc1	90	90.708	Maylandia_zebra
ENSGAFG00000011486	dkc1	66	85.641	ENSMGAG00000009238	DKC1	89	83.010	Meleagris_gallopavo
ENSGAFG00000011486	dkc1	69	84.461	ENSMICG00000038751	-	80	84.461	Microcebus_murinus
ENSGAFG00000011486	dkc1	68	72.861	ENSMICG00000002818	-	99	75.824	Microcebus_murinus
ENSGAFG00000011486	dkc1	72	90.714	ENSMMOG00000020348	dkc1	88	91.626	Mola_mola
ENSGAFG00000011486	dkc1	69	85.536	ENSMODG00000009243	DKC1	70	85.572	Monodelphis_domestica
ENSGAFG00000011486	dkc1	73	91.549	ENSMALG00000009454	dkc1	85	90.762	Monopterus_albus
ENSGAFG00000011486	dkc1	74	68.750	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.102	Mus_caroli
ENSGAFG00000011486	dkc1	73	80.365	ENSMUSG00000031403	Dkc1	86	80.365	Mus_musculus
ENSGAFG00000011486	dkc1	73	80.920	MGP_PahariEiJ_G0031735	Dkc1	85	80.920	Mus_pahari
ENSGAFG00000011486	dkc1	73	80.365	MGP_SPRETEiJ_G0034351	Dkc1	86	80.365	Mus_spretus
ENSGAFG00000011486	dkc1	79	77.560	ENSMPUG00000016136	DKC1	84	77.440	Mustela_putorius_furo
ENSGAFG00000011486	dkc1	77	75.375	ENSMLUG00000011918	DKC1	85	76.975	Myotis_lucifugus
ENSGAFG00000011486	dkc1	68	95.696	ENSNBRG00000005638	dkc1	80	95.696	Neolamprologus_brichardi
ENSGAFG00000011486	dkc1	74	80.227	ENSNLEG00000014323	DKC1	85	80.227	Nomascus_leucogenys
ENSGAFG00000011486	dkc1	73	78.689	ENSMEUG00000001066	DKC1	96	76.417	Notamacropus_eugenii
ENSGAFG00000011486	dkc1	60	78.963	ENSOPRG00000005248	DKC1	69	78.963	Ochotona_princeps
ENSGAFG00000011486	dkc1	69	86.967	ENSODEG00000011816	-	85	82.339	Octodon_degus
ENSGAFG00000011486	dkc1	83	89.095	ENSONIG00000013889	dkc1	86	92.361	Oreochromis_niloticus
ENSGAFG00000011486	dkc1	72	83.295	ENSOANG00000008713	-	90	82.569	Ornithorhynchus_anatinus
ENSGAFG00000011486	dkc1	74	79.365	ENSOCUG00000012646	DKC1	86	79.365	Oryctolagus_cuniculus
ENSGAFG00000011486	dkc1	79	86.652	ENSORLG00000018748	dkc1	85	87.529	Oryzias_latipes
ENSGAFG00000011486	dkc1	82	83.824	ENSOMEG00000005786	dkc1	83	89.627	Oryzias_melastigma
ENSGAFG00000011486	dkc1	74	78.222	ENSOGAG00000003399	DKC1	86	78.222	Otolemur_garnettii
ENSGAFG00000011486	dkc1	73	81.007	ENSOARG00000003047	DKC1	88	80.135	Ovis_aries
ENSGAFG00000011486	dkc1	71	81.882	ENSPPAG00000023820	DKC1	85	80.682	Pan_paniscus
ENSGAFG00000011486	dkc1	73	80.645	ENSPPRG00000009104	DKC1	86	80.645	Panthera_pardus
ENSGAFG00000011486	dkc1	73	82.701	ENSPTIG00000017469	DKC1	85	82.701	Panthera_tigris_altaica
ENSGAFG00000011486	dkc1	74	80.455	ENSPTRG00000022449	DKC1	85	80.455	Pan_troglodytes
ENSGAFG00000011486	dkc1	74	80.455	ENSPTRG00000043416	-	74	80.455	Pan_troglodytes
ENSGAFG00000011486	dkc1	74	80.227	ENSPANG00000011978	DKC1	85	80.227	Papio_anubis
ENSGAFG00000011486	dkc1	74	86.636	ENSPKIG00000008443	dkc1	92	86.239	Paramormyrops_kingsleyae
ENSGAFG00000011486	dkc1	62	88.547	ENSPSIG00000013765	DKC1	86	88.547	Pelodiscus_sinensis
ENSGAFG00000011486	dkc1	80	76.398	ENSPMGG00000004097	dkc1	84	78.384	Periophthalmus_magnuspinnatus
ENSGAFG00000011486	dkc1	55	84.211	ENSPEMG00000013348	Dkc1	82	84.211	Peromyscus_maniculatus_bairdii
ENSGAFG00000011486	dkc1	69	86.070	ENSPCIG00000016706	DKC1	68	86.070	Phascolarctos_cinereus
ENSGAFG00000011486	dkc1	86	98.400	ENSPFOG00000018653	dkc1	100	98.400	Poecilia_formosa
ENSGAFG00000011486	dkc1	95	96.203	ENSPLAG00000003272	dkc1	100	96.203	Poecilia_latipinna
ENSGAFG00000011486	dkc1	86	97.800	ENSPMEG00000010413	dkc1	100	97.800	Poecilia_mexicana
ENSGAFG00000011486	dkc1	95	96.564	ENSPREG00000004100	dkc1	100	96.564	Poecilia_reticulata
ENSGAFG00000011486	dkc1	74	80.455	ENSPPYG00000020892	DKC1	86	80.455	Pongo_abelii
ENSGAFG00000011486	dkc1	64	85.294	ENSPCAG00000015034	DKC1	73	85.294	Procavia_capensis
ENSGAFG00000011486	dkc1	77	78.214	ENSPCOG00000026874	DKC1	85	79.545	Propithecus_coquereli
ENSGAFG00000011486	dkc1	74	81.163	ENSPVAG00000009222	DKC1	86	81.163	Pteropus_vampyrus
ENSGAFG00000011486	dkc1	79	87.686	ENSPNYG00000020063	dkc1	88	88.739	Pundamilia_nyererei
ENSGAFG00000011486	dkc1	74	86.270	ENSPNAG00000005780	dkc1	86	86.143	Pygocentrus_nattereri
ENSGAFG00000011486	dkc1	73	78.311	ENSRNOG00000055562	Dkc1	86	78.539	Rattus_norvegicus
ENSGAFG00000011486	dkc1	82	74.400	ENSRBIG00000028457	DKC1	86	73.346	Rhinopithecus_bieti
ENSGAFG00000011486	dkc1	74	80.227	ENSRROG00000044780	DKC1	85	80.227	Rhinopithecus_roxellana
ENSGAFG00000011486	dkc1	68	69.873	YLR175W	-	85	66.905	Saccharomyces_cerevisiae
ENSGAFG00000011486	dkc1	74	80.455	ENSSBOG00000033746	DKC1	85	80.455	Saimiri_boliviensis_boliviensis
ENSGAFG00000011486	dkc1	78	78.462	ENSSHAG00000002463	DKC1	94	80.361	Sarcophilus_harrisii
ENSGAFG00000011486	dkc1	77	84.649	ENSSFOG00015009585	dkc1	85	86.406	Scleropages_formosus
ENSGAFG00000011486	dkc1	77	87.004	ENSSMAG00000002552	dkc1	89	87.004	Scophthalmus_maximus
ENSGAFG00000011486	dkc1	80	89.032	ENSSDUG00000009963	dkc1	90	90.287	Seriola_dumerili
ENSGAFG00000011486	dkc1	80	87.716	ENSSLDG00000019342	dkc1	87	89.815	Seriola_lalandi_dorsalis
ENSGAFG00000011486	dkc1	74	75.399	ENSSARG00000001822	DKC1	88	76.082	Sorex_araneus
ENSGAFG00000011486	dkc1	72	82.898	ENSSPUG00000018907	DKC1	86	78.681	Sphenodon_punctatus
ENSGAFG00000011486	dkc1	81	89.079	ENSSPAG00000002585	dkc1	82	90.531	Stegastes_partitus
ENSGAFG00000011486	dkc1	81	75.847	ENSSSCG00000012823	DKC1	88	81.473	Sus_scrofa
ENSGAFG00000011486	dkc1	77	79.476	ENSTGUG00000006781	DKC1	99	78.043	Taeniopygia_guttata
ENSGAFG00000011486	dkc1	78	88.444	ENSTRUG00000004413	dkc1	90	88.444	Takifugu_rubripes
ENSGAFG00000011486	dkc1	77	70.194	ENSTNIG00000002582	dkc1	87	70.628	Tetraodon_nigroviridis
ENSGAFG00000011486	dkc1	81	76.596	ENSUAMG00000022721	DKC1	89	82.185	Ursus_americanus
ENSGAFG00000011486	dkc1	81	76.170	ENSUMAG00000016899	DKC1	98	83.459	Ursus_maritimus
ENSGAFG00000011486	dkc1	70	82.057	ENSVVUG00000020734	-	72	82.057	Vulpes_vulpes
ENSGAFG00000011486	dkc1	69	70.677	ENSVVUG00000021671	-	76	69.756	Vulpes_vulpes
ENSGAFG00000011486	dkc1	84	79.022	ENSXETG00000032517	DKC1	92	80.380	Xenopus_tropicalis
ENSGAFG00000011486	dkc1	81	95.522	ENSXCOG00000005498	dkc1	100	95.522	Xiphophorus_couchianus
ENSGAFG00000011486	dkc1	86	98.400	ENSXMAG00000004919	dkc1	100	98.400	Xiphophorus_maculatus