EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000011616 (Gene tree)
Gene ID: -
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10310 bases
Position: chrNHOQ01001433.1:4559546-4569855
Accession: ZDB-GENE-040718-267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017195	Nop16	PF09420.10	1.5e-18	1	1
ENSGAFP00000017202	Nop16	PF09420.10	6.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017361	-	543	-	ENSGAFP00000017195	180 (aa)	-	-
ENSGAFT00000017368	-	549	-	ENSGAFP00000017202	182 (aa)	-	-
ENSGAFT00000017356	-	465	-	ENSGAFP00000017190	154 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011616	nop16	79	73.427	ENSAPOG00000010682	-	84	71.622	Acanthochromis_polyacanthus
ENSGAFG00000011616	nop16	79	53.741	ENSAMEG00000006988	-	83	53.741	Ailuropoda_melanoleuca
ENSGAFG00000011616	nop16	80	73.103	ENSACIG00000019263	nop16	88	71.429	Amphilophus_citrinellus
ENSGAFG00000011616	nop16	79	74.825	ENSAOCG00000005504	nop16	84	72.973	Amphiprion_ocellaris
ENSGAFG00000011616	nop16	79	74.825	ENSAPEG00000006605	nop16	84	72.973	Amphiprion_percula
ENSGAFG00000011616	nop16	90	67.857	ENSATEG00000014089	nop16	82	76.552	Anabas_testudineus
ENSGAFG00000011616	nop16	83	55.263	ENSACAG00000006333	-	85	55.921	Anolis_carolinensis
ENSGAFG00000011616	nop16	79	51.020	ENSANAG00000015743	-	82	51.020	Aotus_nancymaae
ENSGAFG00000011616	nop16	80	48.322	ENSANAG00000027410	-	83	48.322	Aotus_nancymaae
ENSGAFG00000011616	nop16	80	73.793	ENSACLG00000025227	nop16	86	73.333	Astatotilapia_calliptera
ENSGAFG00000011616	nop16	76	51.799	ENSAMXG00000006843	nop16	84	51.034	Astyanax_mexicanus
ENSGAFG00000011616	nop16	79	55.102	ENSBTAG00000010734	NOP16	83	55.102	Bos_taurus
ENSGAFG00000011616	nop16	79	52.381	ENSCAFG00000016694	NOP16	83	52.381	Canis_familiaris
ENSGAFG00000011616	nop16	79	52.381	ENSCAFG00020011505	-	78	52.381	Canis_lupus_dingo
ENSGAFG00000011616	nop16	79	55.102	ENSCHIG00000022082	-	83	55.102	Capra_hircus
ENSGAFG00000011616	nop16	79	53.061	ENSTSYG00000030409	-	83	53.061	Carlito_syrichta
ENSGAFG00000011616	nop16	74	47.101	ENSTSYG00000032690	-	77	47.101	Carlito_syrichta
ENSGAFG00000011616	nop16	83	53.247	ENSCPOG00000026072	-	85	53.247	Cavia_porcellus
ENSGAFG00000011616	nop16	72	52.239	ENSCCAG00000026775	-	78	52.239	Cebus_capucinus
ENSGAFG00000011616	nop16	79	54.422	ENSCLAG00000015405	-	83	54.422	Chinchilla_lanigera
ENSGAFG00000011616	nop16	79	53.741	ENSCSAG00000009400	-	83	53.741	Chlorocebus_sabaeus
ENSGAFG00000011616	nop16	84	52.229	ENSCPBG00000022647	-	87	52.229	Chrysemys_picta_bellii
ENSGAFG00000011616	nop16	81	37.500	ENSCING00000006179	-	82	37.500	Ciona_intestinalis
ENSGAFG00000011616	nop16	73	39.855	ENSCSAVG00000000269	-	90	37.037	Ciona_savignyi
ENSGAFG00000011616	nop16	79	53.061	ENSCGRG00001004259	Nop16	83	53.061	Cricetulus_griseus_chok1gshd
ENSGAFG00000011616	nop16	79	53.061	ENSCGRG00000010975	Nop16	83	53.061	Cricetulus_griseus_crigri
ENSGAFG00000011616	nop16	73	65.185	ENSCSEG00000020523	nop16	76	66.165	Cynoglossus_semilaevis
ENSGAFG00000011616	nop16	80	84.828	ENSCVAG00000020140	nop16	89	80.892	Cyprinodon_variegatus
ENSGAFG00000011616	nop16	75	52.174	ENSDARG00000044402	nop16	85	49.333	Danio_rerio
ENSGAFG00000011616	nop16	79	52.055	ENSDNOG00000042890	-	82	52.055	Dasypus_novemcinctus
ENSGAFG00000011616	nop16	81	55.034	ENSDORG00000008872	Nop16	83	55.102	Dipodomys_ordii
ENSGAFG00000011616	nop16	79	41.722	ENSEBUG00000011196	nop16	83	41.722	Eptatretus_burgeri
ENSGAFG00000011616	nop16	79	53.741	ENSEASG00005011988	-	83	53.741	Equus_asinus_asinus
ENSGAFG00000011616	nop16	79	54.422	ENSECAG00000021354	NOP16	83	54.422	Equus_caballus
ENSGAFG00000011616	nop16	75	60.432	ENSELUG00000000401	nop16	85	57.333	Esox_lucius
ENSGAFG00000011616	nop16	79	53.741	ENSFCAG00000025473	-	83	53.741	Felis_catus
ENSGAFG00000011616	nop16	73	57.778	ENSFALG00000008553	-	75	57.778	Ficedula_albicollis
ENSGAFG00000011616	nop16	79	51.701	ENSFDAG00000000193	-	83	51.701	Fukomys_damarensis
ENSGAFG00000011616	nop16	80	84.138	ENSFHEG00000016452	nop16	89	80.255	Fundulus_heteroclitus
ENSGAFG00000011616	nop16	83	54.487	ENSGALG00000003355	-	86	54.487	Gallus_gallus
ENSGAFG00000011616	nop16	81	64.189	ENSGACG00000003122	-	99	71.552	Gasterosteus_aculeatus
ENSGAFG00000011616	nop16	79	56.757	ENSGACG00000020810	nop16	86	56.757	Gasterosteus_aculeatus
ENSGAFG00000011616	nop16	81	65.068	ENSGACG00000020819	-	86	65.068	Gasterosteus_aculeatus
ENSGAFG00000011616	nop16	81	66.438	ENSGACG00000002618	-	86	66.438	Gasterosteus_aculeatus
ENSGAFG00000011616	nop16	80	74.483	ENSHBUG00000013527	nop16	88	73.377	Haplochromis_burtoni
ENSGAFG00000011616	nop16	83	51.948	ENSHGLG00000013437	NOP16	83	53.061	Heterocephalus_glaber_female
ENSGAFG00000011616	nop16	83	51.948	ENSHGLG00100011375	NOP16	83	53.061	Heterocephalus_glaber_male
ENSGAFG00000011616	nop16	75	71.533	ENSHCOG00000019999	nop16	87	66.234	Hippocampus_comes
ENSGAFG00000011616	nop16	91	53.049	ENSIPUG00000006682	nop16	92	53.049	Ictalurus_punctatus
ENSGAFG00000011616	nop16	79	52.349	ENSSTOG00000004869	-	83	52.349	Ictidomys_tridecemlineatus
ENSGAFG00000011616	nop16	79	53.061	ENSJJAG00000017655	Nop16	83	53.061	Jaculus_jaculus
ENSGAFG00000011616	nop16	80	75.172	ENSKMAG00000006164	nop16	89	71.975	Kryptolebias_marmoratus
ENSGAFG00000011616	nop16	52	72.340	ENSLBEG00000013819	-	67	71.134	Labrus_bergylta
ENSGAFG00000011616	nop16	76	73.381	ENSLBEG00000018355	nop16	64	73.381	Labrus_bergylta
ENSGAFG00000011616	nop16	74	59.854	ENSLACG00000014884	nop16	84	56.376	Latimeria_chalumnae
ENSGAFG00000011616	nop16	72	62.406	ENSLOCG00000012348	nop16	82	59.184	Lepisosteus_oculatus
ENSGAFG00000011616	nop16	79	53.425	ENSLAFG00000017886	-	82	53.425	Loxodonta_africana
ENSGAFG00000011616	nop16	79	70.139	ENSMAMG00000021868	nop16	81	70.139	Mastacembelus_armatus
ENSGAFG00000011616	nop16	80	73.793	ENSMZEG00005012112	nop16	86	73.333	Maylandia_zebra
ENSGAFG00000011616	nop16	51	63.736	ENSMGAG00000004726	-	88	63.736	Meleagris_gallopavo
ENSGAFG00000011616	nop16	77	51.064	ENSMAUG00000015569	-	83	51.064	Mesocricetus_auratus
ENSGAFG00000011616	nop16	51	61.538	ENSMAUG00000009852	-	86	61.538	Mesocricetus_auratus
ENSGAFG00000011616	nop16	79	53.741	ENSMOCG00000020788	Nop16	83	53.741	Microtus_ochrogaster
ENSGAFG00000011616	nop16	76	70.290	ENSMMOG00000016054	nop16	88	67.333	Mola_mola
ENSGAFG00000011616	nop16	79	56.081	ENSMODG00000005214	-	83	56.081	Monodelphis_domestica
ENSGAFG00000011616	nop16	80	79.310	ENSMALG00000021263	nop16	89	75.159	Monopterus_albus
ENSGAFG00000011616	nop16	79	53.061	MGP_CAROLIEiJ_G0018538	Nop16	83	53.061	Mus_caroli
ENSGAFG00000011616	nop16	79	53.741	ENSMUSG00000025869	Nop16	83	53.741	Mus_musculus
ENSGAFG00000011616	nop16	79	54.422	MGP_PahariEiJ_G0019603	Nop16	83	54.422	Mus_pahari
ENSGAFG00000011616	nop16	79	53.061	MGP_SPRETEiJ_G0019418	Nop16	83	53.061	Mus_spretus
ENSGAFG00000011616	nop16	79	53.061	ENSMPUG00000012552	-	83	53.061	Mustela_putorius_furo
ENSGAFG00000011616	nop16	77	52.113	ENSMPUG00000016964	-	80	52.113	Mustela_putorius_furo
ENSGAFG00000011616	nop16	79	53.425	ENSMLUG00000003504	-	82	53.425	Myotis_lucifugus
ENSGAFG00000011616	nop16	79	53.061	ENSNGAG00000018045	Nop16	83	53.061	Nannospalax_galili
ENSGAFG00000011616	nop16	80	73.793	ENSNBRG00000015181	nop16	86	72.667	Neolamprologus_brichardi
ENSGAFG00000011616	nop16	79	53.741	ENSODEG00000009586	-	83	53.741	Octodon_degus
ENSGAFG00000011616	nop16	80	75.172	ENSONIG00000016417	nop16	86	74.000	Oreochromis_niloticus
ENSGAFG00000011616	nop16	79	53.741	ENSOCUG00000013171	-	83	53.741	Oryctolagus_cuniculus
ENSGAFG00000011616	nop16	84	69.536	ENSORLG00000026611	nop16	87	69.536	Oryzias_latipes
ENSGAFG00000011616	nop16	76	73.529	ENSOMEG00000023001	nop16	85	69.799	Oryzias_melastigma
ENSGAFG00000011616	nop16	96	49.432	ENSOGAG00000000824	-	96	49.432	Otolemur_garnettii
ENSGAFG00000011616	nop16	79	55.102	ENSOARG00000002165	-	83	55.102	Ovis_aries
ENSGAFG00000011616	nop16	79	53.741	ENSPPAG00000035473	-	83	53.741	Pan_paniscus
ENSGAFG00000011616	nop16	79	53.741	ENSPPRG00000016600	-	83	53.741	Panthera_pardus
ENSGAFG00000011616	nop16	79	53.741	ENSPTIG00000011708	-	83	53.741	Panthera_tigris_altaica
ENSGAFG00000011616	nop16	79	53.741	ENSPTRG00000017560	NOP16	83	53.741	Pan_troglodytes
ENSGAFG00000011616	nop16	81	53.741	ENSPKIG00000009587	nop16	86	54.305	Paramormyrops_kingsleyae
ENSGAFG00000011616	nop16	76	58.333	ENSPSIG00000013546	-	96	58.333	Pelodiscus_sinensis
ENSGAFG00000011616	nop16	76	72.535	ENSPMGG00000003443	nop16	84	72.222	Periophthalmus_magnuspinnatus
ENSGAFG00000011616	nop16	79	53.061	ENSPEMG00000020268	Nop16	83	53.061	Peromyscus_maniculatus_bairdii
ENSGAFG00000011616	nop16	79	54.054	ENSPCIG00000009782	-	83	54.054	Phascolarctos_cinereus
ENSGAFG00000011616	nop16	80	93.103	ENSPFOG00000010549	nop16	89	88.535	Poecilia_formosa
ENSGAFG00000011616	nop16	81	91.781	ENSPLAG00000007124	nop16	77	91.781	Poecilia_latipinna
ENSGAFG00000011616	nop16	80	93.793	ENSPMEG00000008611	nop16	89	89.172	Poecilia_mexicana
ENSGAFG00000011616	nop16	80	93.103	ENSPREG00000012940	nop16	89	88.535	Poecilia_reticulata
ENSGAFG00000011616	nop16	79	54.422	ENSPPYG00000016070	-	83	54.422	Pongo_abelii
ENSGAFG00000011616	nop16	80	73.793	ENSPNYG00000013529	nop16	88	72.727	Pundamilia_nyererei
ENSGAFG00000011616	nop16	76	56.204	ENSPNAG00000016233	nop16	87	54.305	Pygocentrus_nattereri
ENSGAFG00000011616	nop16	79	53.741	ENSRNOG00000017284	Nop16	83	53.741	Rattus_norvegicus
ENSGAFG00000011616	nop16	79	55.333	ENSSHAG00000001724	-	83	55.333	Sarcophilus_harrisii
ENSGAFG00000011616	nop16	77	55.714	ENSSFOG00015010537	nop16	71	52.866	Scleropages_formosus
ENSGAFG00000011616	nop16	80	77.241	ENSSDUG00000022349	nop16	89	73.248	Seriola_dumerili
ENSGAFG00000011616	nop16	80	77.241	ENSSLDG00000025171	nop16	89	73.248	Seriola_lalandi_dorsalis
ENSGAFG00000011616	nop16	57	42.991	ENSSARG00000006699	-	50	42.991	Sorex_araneus
ENSGAFG00000011616	nop16	84	59.355	ENSSPUG00000006508	-	86	59.355	Sphenodon_punctatus
ENSGAFG00000011616	nop16	80	76.552	ENSSPAG00000011772	nop16	89	73.248	Stegastes_partitus
ENSGAFG00000011616	nop16	79	55.102	ENSSSCG00000029577	-	83	55.102	Sus_scrofa
ENSGAFG00000011616	nop16	73	57.353	ENSTGUG00000000543	-	96	48.315	Taeniopygia_guttata
ENSGAFG00000011616	nop16	80	67.347	ENSTRUG00000020255	nop16	88	66.026	Takifugu_rubripes
ENSGAFG00000011616	nop16	78	68.310	ENSTNIG00000007616	nop16	87	65.584	Tetraodon_nigroviridis
ENSGAFG00000011616	nop16	79	53.741	ENSUAMG00000005139	-	83	53.741	Ursus_americanus
ENSGAFG00000011616	nop16	79	52.381	ENSVVUG00000001697	-	78	52.381	Vulpes_vulpes
ENSGAFG00000011616	nop16	74	51.852	ENSXETG00000022342	nop16	97	46.154	Xenopus_tropicalis
ENSGAFG00000011616	nop16	76	92.029	ENSXCOG00000018829	nop16	86	87.333	Xiphophorus_couchianus
ENSGAFG00000011616	nop16	80	91.724	ENSXMAG00000029113	nop16	89	87.261	Xiphophorus_maculatus