EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000011698 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 26908 bases
Position: chrNHOQ01002357.1:973694-1000601
Accession: ZDB-GENE-080521-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017308	RRM_1	PF00076.22	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017476	-	4284	-	ENSGAFP00000017308	1427 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011698	setd1a	64	95.522	ENSAPOG00000018002	setd1a	50	94.608	Acanthochromis_polyacanthus
ENSGAFG00000011698	setd1a	93	77.273	ENSACIG00000007144	setd1a	81	84.483	Amphilophus_citrinellus
ENSGAFG00000011698	setd1a	78	92.994	ENSAOCG00000003663	setd1a	57	92.994	Amphiprion_ocellaris
ENSGAFG00000011698	setd1a	78	92.593	ENSATEG00000022798	setd1a	61	92.593	Anabas_testudineus
ENSGAFG00000011698	setd1a	55	62.838	ENSANAG00000021698	-	67	59.680	Aotus_nancymaae
ENSGAFG00000011698	setd1a	80	91.562	ENSACLG00000024747	setd1a	60	91.562	Astatotilapia_calliptera
ENSGAFG00000011698	setd1a	75	89.796	ENSAMXG00000009497	setd1a	58	84.718	Astyanax_mexicanus
ENSGAFG00000011698	setd1a	54	67.018	ENSCPBG00000010830	-	80	56.140	Chrysemys_picta_bellii
ENSGAFG00000011698	setd1a	84	92.593	ENSCSEG00000021605	setd1a	62	92.593	Cynoglossus_semilaevis
ENSGAFG00000011698	setd1a	86	92.675	ENSCVAG00000011672	setd1a	63	92.971	Cyprinodon_variegatus
ENSGAFG00000011698	setd1a	84	83.387	ENSDARG00000060030	setd1a	63	83.387	Danio_rerio
ENSGAFG00000011698	setd1a	84	83.642	ENSELUG00000020261	setd1a	69	83.642	Esox_lucius
ENSGAFG00000011698	setd1a	94	89.573	ENSFHEG00000023258	setd1a	82	92.593	Fundulus_heteroclitus
ENSGAFG00000011698	setd1a	80	93.269	ENSHBUG00000008893	setd1a	60	93.269	Haplochromis_burtoni
ENSGAFG00000011698	setd1a	56	61.034	ENSHGLG00000014238	-	70	55.096	Heterocephalus_glaber_female
ENSGAFG00000011698	setd1a	93	64.247	ENSHCOG00000003119	setd1a	79	77.193	Hippocampus_comes
ENSGAFG00000011698	setd1a	85	85.246	ENSIPUG00000007413	setd1a	61	85.246	Ictalurus_punctatus
ENSGAFG00000011698	setd1a	86	90.741	ENSKMAG00000009484	setd1a	63	90.741	Kryptolebias_marmoratus
ENSGAFG00000011698	setd1a	82	92.593	ENSLBEG00000004399	setd1a	58	92.593	Labrus_bergylta
ENSGAFG00000011698	setd1a	56	63.176	ENSMNEG00000032572	-	67	59.402	Macaca_nemestrina
ENSGAFG00000011698	setd1a	72	92.593	ENSMAMG00000021851	setd1a	72	92.593	Mastacembelus_armatus
ENSGAFG00000011698	setd1a	80	91.562	ENSMZEG00005023141	setd1a	60	91.562	Maylandia_zebra
ENSGAFG00000011698	setd1a	67	92.593	ENSMMOG00000016992	setd1a	82	92.593	Mola_mola
ENSGAFG00000011698	setd1a	81	92.484	ENSMALG00000007401	setd1a	69	92.484	Monopterus_albus
ENSGAFG00000011698	setd1a	56	62.838	ENSMUSG00000042308	Setd1a	100	71.574	Mus_musculus
ENSGAFG00000011698	setd1a	84	90.705	ENSNBRG00000004760	setd1a	71	90.705	Neolamprologus_brichardi
ENSGAFG00000011698	setd1a	55	60.381	ENSNLEG00000016072	-	51	58.863	Nomascus_leucogenys
ENSGAFG00000011698	setd1a	63	92.857	ENSONIG00000009854	setd1a	71	90.184	Oreochromis_niloticus
ENSGAFG00000011698	setd1a	81	90.764	ENSORLG00000002213	setd1a	61	89.905	Oryzias_latipes
ENSGAFG00000011698	setd1a	81	90.764	ENSORLG00020011897	setd1a	61	89.905	Oryzias_latipes_hni
ENSGAFG00000011698	setd1a	81	91.083	ENSORLG00015004826	setd1a	58	90.221	Oryzias_latipes_hsok
ENSGAFG00000011698	setd1a	79	92.593	ENSOMEG00000019732	setd1a	63	92.593	Oryzias_melastigma
ENSGAFG00000011698	setd1a	86	45.455	ENSOGAG00000028006	-	72	46.935	Otolemur_garnettii
ENSGAFG00000011698	setd1a	83	95.833	ENSPFOG00000013669	setd1a	61	97.101	Poecilia_formosa
ENSGAFG00000011698	setd1a	86	97.959	ENSPLAG00000009294	setd1a	60	95.935	Poecilia_latipinna
ENSGAFG00000011698	setd1a	86	97.959	ENSPMEG00000005864	setd1a	60	95.833	Poecilia_mexicana
ENSGAFG00000011698	setd1a	83	95.860	ENSPREG00000010201	setd1a	61	95.529	Poecilia_reticulata
ENSGAFG00000011698	setd1a	61	70.388	ENSPVAG00000011049	-	59	70.388	Pteropus_vampyrus
ENSGAFG00000011698	setd1a	80	91.562	ENSPNYG00000014139	setd1a	57	91.562	Pundamilia_nyererei
ENSGAFG00000011698	setd1a	83	85.714	ENSPNAG00000019165	setd1a	61	83.713	Pygocentrus_nattereri
ENSGAFG00000011698	setd1a	67	60.707	ENSSHAG00000010784	-	65	54.792	Sarcophilus_harrisii
ENSGAFG00000011698	setd1a	76	81.529	ENSSFOG00015007013	setd1a	58	79.688	Scleropages_formosus
ENSGAFG00000011698	setd1a	80	87.387	ENSSMAG00000008846	setd1a	65	91.667	Scophthalmus_maximus
ENSGAFG00000011698	setd1a	78	92.675	ENSSDUG00000022142	setd1a	57	92.971	Seriola_dumerili
ENSGAFG00000011698	setd1a	78	92.675	ENSSLDG00000018250	setd1a	57	92.971	Seriola_lalandi_dorsalis
ENSGAFG00000011698	setd1a	55	56.061	ENSSARG00000005591	-	54	57.012	Sorex_araneus
ENSGAFG00000011698	setd1a	79	92.994	ENSSPAG00000007822	setd1a	62	93.291	Stegastes_partitus
ENSGAFG00000011698	setd1a	81	91.401	ENSTRUG00000008953	setd1a	61	91.401	Takifugu_rubripes
ENSGAFG00000011698	setd1a	68	88.889	ENSTNIG00000014930	setd1a	73	88.889	Tetraodon_nigroviridis
ENSGAFG00000011698	setd1a	92	99.363	ENSXCOG00000017585	setd1a	62	99.681	Xiphophorus_couchianus
ENSGAFG00000011698	setd1a	86	99.107	ENSXMAG00000008021	setd1a	61	98.361	Xiphophorus_maculatus