EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000011853 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5941 bases
Position: chrNHOQ01001911.1:6174448-6180388
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017511	RTC	PF01137.21	3.9e-87	1	1
ENSGAFP00000017511	RTC_insert	PF05189.13	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017680	-	1530	-	ENSGAFP00000017511	366 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011853	rtca	99	71.038	ENSG00000137996	RTCA	100	71.038	Homo_sapiens
ENSGAFG00000011853	rtca	100	89.891	ENSAPOG00000001345	rtca	100	89.891	Acanthochromis_polyacanthus
ENSGAFG00000011853	rtca	73	73.234	ENSAMEG00000008855	RTCA	100	73.234	Ailuropoda_melanoleuca
ENSGAFG00000011853	rtca	99	90.110	ENSACIG00000019643	rtca	100	90.110	Amphilophus_citrinellus
ENSGAFG00000011853	rtca	100	90.437	ENSAOCG00000014979	rtca	100	90.437	Amphiprion_ocellaris
ENSGAFG00000011853	rtca	100	90.437	ENSAPEG00000006945	rtca	100	90.437	Amphiprion_percula
ENSGAFG00000011853	rtca	95	91.117	ENSATEG00000006315	rtca	96	91.117	Anabas_testudineus
ENSGAFG00000011853	rtca	95	67.139	ENSAPLG00000015430	RTCA	100	67.139	Anas_platyrhynchos
ENSGAFG00000011853	rtca	99	71.038	ENSANAG00000025446	RTCA	100	71.038	Aotus_nancymaae
ENSGAFG00000011853	rtca	100	90.437	ENSACLG00000020770	rtca	100	90.437	Astatotilapia_calliptera
ENSGAFG00000011853	rtca	99	78.297	ENSAMXG00000043271	rtca	100	78.297	Astyanax_mexicanus
ENSGAFG00000011853	rtca	99	72.131	ENSBTAG00000006321	RTCA	100	72.131	Bos_taurus
ENSGAFG00000011853	rtca	99	71.311	ENSCJAG00000003398	RTCA	100	71.311	Callithrix_jacchus
ENSGAFG00000011853	rtca	99	71.038	ENSCAFG00000020010	RTCA	68	71.038	Canis_familiaris
ENSGAFG00000011853	rtca	99	71.038	ENSCAFG00020011528	RTCA	57	71.038	Canis_lupus_dingo
ENSGAFG00000011853	rtca	99	71.858	ENSCHIG00000018937	RTCA	100	71.858	Capra_hircus
ENSGAFG00000011853	rtca	99	71.585	ENSTSYG00000011305	RTCA	100	71.585	Carlito_syrichta
ENSGAFG00000011853	rtca	99	71.038	ENSCCAG00000021844	RTCA	100	71.038	Cebus_capucinus
ENSGAFG00000011853	rtca	99	69.393	ENSCATG00000019364	RTCA	100	72.168	Cercocebus_atys
ENSGAFG00000011853	rtca	86	73.101	ENSCLAG00000006125	RTCA	100	73.101	Chinchilla_lanigera
ENSGAFG00000011853	rtca	99	71.585	ENSCSAG00000001509	RTCA	100	71.585	Chlorocebus_sabaeus
ENSGAFG00000011853	rtca	98	71.191	ENSCHOG00000005211	RTCA	99	71.191	Choloepus_hoffmanni
ENSGAFG00000011853	rtca	99	67.945	ENSCPBG00000026658	RTCA	100	67.945	Chrysemys_picta_bellii
ENSGAFG00000011853	rtca	98	57.939	ENSCING00000007875	-	98	57.939	Ciona_intestinalis
ENSGAFG00000011853	rtca	98	57.103	ENSCSAVG00000007269	-	98	57.103	Ciona_savignyi
ENSGAFG00000011853	rtca	99	71.311	ENSCANG00000040106	RTCA	100	71.311	Colobus_angolensis_palliatus
ENSGAFG00000011853	rtca	73	71.375	ENSCGRG00001013163	Rtca	85	71.375	Cricetulus_griseus_chok1gshd
ENSGAFG00000011853	rtca	98	84.637	ENSCSEG00000000530	rtca	96	84.637	Cynoglossus_semilaevis
ENSGAFG00000011853	rtca	99	74.044	ENSCVAG00000021809	rtca	100	74.044	Cyprinodon_variegatus
ENSGAFG00000011853	rtca	99	78.297	ENSDARG00000002215	rtca	100	78.297	Danio_rerio
ENSGAFG00000011853	rtca	99	71.858	ENSDNOG00000000456	RTCA	100	71.858	Dasypus_novemcinctus
ENSGAFG00000011853	rtca	99	71.311	ENSDORG00000005448	Rtca	100	71.311	Dipodomys_ordii
ENSGAFG00000011853	rtca	97	38.936	FBgn0025630	Rtca	98	38.936	Drosophila_melanogaster
ENSGAFG00000011853	rtca	93	52.047	ENSEBUG00000008556	rtca	94	52.047	Eptatretus_burgeri
ENSGAFG00000011853	rtca	99	71.585	ENSEASG00005015926	RTCA	100	71.585	Equus_asinus_asinus
ENSGAFG00000011853	rtca	99	71.585	ENSECAG00000019831	RTCA	100	71.585	Equus_caballus
ENSGAFG00000011853	rtca	91	64.162	ENSEEUG00000001165	RTCA	100	64.162	Erinaceus_europaeus
ENSGAFG00000011853	rtca	99	76.519	ENSELUG00000003741	rtca	99	76.519	Esox_lucius
ENSGAFG00000011853	rtca	99	71.585	ENSFCAG00000024460	RTCA	100	71.585	Felis_catus
ENSGAFG00000011853	rtca	92	67.751	ENSFALG00000002443	RTCA	91	67.751	Ficedula_albicollis
ENSGAFG00000011853	rtca	99	70.765	ENSFDAG00000012070	-	100	70.765	Fukomys_damarensis
ENSGAFG00000011853	rtca	98	58.011	ENSFDAG00000016084	-	100	58.011	Fukomys_damarensis
ENSGAFG00000011853	rtca	70	75.486	ENSFHEG00000002868	rtca	92	83.721	Fundulus_heteroclitus
ENSGAFG00000011853	rtca	99	79.670	ENSGMOG00000013264	rtca	100	79.670	Gadus_morhua
ENSGAFG00000011853	rtca	99	68.219	ENSGALG00000005277	RTCA	100	68.219	Gallus_gallus
ENSGAFG00000011853	rtca	99	87.637	ENSGACG00000013497	rtca	100	87.637	Gasterosteus_aculeatus
ENSGAFG00000011853	rtca	80	67.235	ENSGAGG00000023306	RTCA	100	67.235	Gopherus_agassizii
ENSGAFG00000011853	rtca	99	71.038	ENSGGOG00000009546	-	100	71.197	Gorilla_gorilla
ENSGAFG00000011853	rtca	99	70.492	ENSGGOG00000044018	-	100	70.492	Gorilla_gorilla
ENSGAFG00000011853	rtca	100	90.164	ENSHBUG00000002114	rtca	100	90.164	Haplochromis_burtoni
ENSGAFG00000011853	rtca	99	71.311	ENSHGLG00000002617	RTCA	100	71.311	Heterocephalus_glaber_female
ENSGAFG00000011853	rtca	99	71.311	ENSHGLG00100006056	RTCA	100	71.311	Heterocephalus_glaber_male
ENSGAFG00000011853	rtca	99	76.438	ENSHCOG00000020628	rtca	90	76.438	Hippocampus_comes
ENSGAFG00000011853	rtca	99	77.747	ENSIPUG00000024803	rtca	100	77.747	Ictalurus_punctatus
ENSGAFG00000011853	rtca	99	66.393	ENSSTOG00000013528	-	100	66.393	Ictidomys_tridecemlineatus
ENSGAFG00000011853	rtca	99	63.115	ENSSTOG00000033099	-	100	63.115	Ictidomys_tridecemlineatus
ENSGAFG00000011853	rtca	99	52.877	ENSJJAG00000016178	Rtca	100	52.877	Jaculus_jaculus
ENSGAFG00000011853	rtca	100	90.437	ENSKMAG00000006651	rtca	100	90.437	Kryptolebias_marmoratus
ENSGAFG00000011853	rtca	87	86.207	ENSLBEG00000002448	-	99	86.207	Labrus_bergylta
ENSGAFG00000011853	rtca	99	87.535	ENSLBEG00000028971	rtca	99	87.535	Labrus_bergylta
ENSGAFG00000011853	rtca	99	67.397	ENSLACG00000013666	RTCA	100	67.397	Latimeria_chalumnae
ENSGAFG00000011853	rtca	99	74.521	ENSLOCG00000000093	rtca	99	74.521	Lepisosteus_oculatus
ENSGAFG00000011853	rtca	99	70.765	ENSLAFG00000001473	RTCA	100	70.765	Loxodonta_africana
ENSGAFG00000011853	rtca	99	71.585	ENSMFAG00000034132	RTCA	100	71.585	Macaca_fascicularis
ENSGAFG00000011853	rtca	99	71.585	ENSMMUG00000019105	RTCA	100	71.585	Macaca_mulatta
ENSGAFG00000011853	rtca	84	71.845	ENSMNEG00000037163	RTCA	100	71.845	Macaca_nemestrina
ENSGAFG00000011853	rtca	99	59.016	ENSMLEG00000042151	RTCA	100	59.016	Mandrillus_leucophaeus
ENSGAFG00000011853	rtca	99	91.484	ENSMAMG00000016536	rtca	100	91.484	Mastacembelus_armatus
ENSGAFG00000011853	rtca	100	90.437	ENSMZEG00005017945	rtca	100	90.437	Maylandia_zebra
ENSGAFG00000011853	rtca	87	68.239	ENSMGAG00000006892	RTCA	99	68.239	Meleagris_gallopavo
ENSGAFG00000011853	rtca	99	71.038	ENSMAUG00000008488	Rtca	100	71.038	Mesocricetus_auratus
ENSGAFG00000011853	rtca	84	72.492	ENSMICG00000008643	RTCA	100	72.492	Microcebus_murinus
ENSGAFG00000011853	rtca	99	69.945	ENSMOCG00000016660	Rtca	100	69.945	Microtus_ochrogaster
ENSGAFG00000011853	rtca	84	88.274	ENSMMOG00000007750	rtca	100	88.274	Mola_mola
ENSGAFG00000011853	rtca	99	71.585	ENSMODG00000003557	RTCA	100	71.585	Monodelphis_domestica
ENSGAFG00000011853	rtca	99	90.934	ENSMALG00000020844	rtca	100	90.934	Monopterus_albus
ENSGAFG00000011853	rtca	99	69.672	MGP_CAROLIEiJ_G0025565	Rtca	100	69.672	Mus_caroli
ENSGAFG00000011853	rtca	99	69.399	ENSMUSG00000000339	Rtca	100	69.399	Mus_musculus
ENSGAFG00000011853	rtca	99	69.672	MGP_PahariEiJ_G0027011	Rtca	100	69.672	Mus_pahari
ENSGAFG00000011853	rtca	99	69.672	MGP_SPRETEiJ_G0026515	Rtca	100	69.672	Mus_spretus
ENSGAFG00000011853	rtca	99	71.585	ENSMPUG00000012119	RTCA	100	71.585	Mustela_putorius_furo
ENSGAFG00000011853	rtca	99	67.575	ENSMLUG00000009922	RTCA	100	67.575	Myotis_lucifugus
ENSGAFG00000011853	rtca	99	70.492	ENSNGAG00000011540	Rtca	99	70.492	Nannospalax_galili
ENSGAFG00000011853	rtca	100	90.710	ENSNBRG00000003062	rtca	100	90.710	Neolamprologus_brichardi
ENSGAFG00000011853	rtca	99	71.311	ENSNLEG00000031426	RTCA	100	71.311	Nomascus_leucogenys
ENSGAFG00000011853	rtca	73	69.145	ENSOPRG00000012092	RTCA	71	69.145	Ochotona_princeps
ENSGAFG00000011853	rtca	95	71.839	ENSODEG00000006990	RTCA	96	72.080	Octodon_degus
ENSGAFG00000011853	rtca	100	90.984	ENSONIG00000007753	rtca	100	90.984	Oreochromis_niloticus
ENSGAFG00000011853	rtca	86	72.240	ENSOANG00000012055	RTCA	98	72.240	Ornithorhynchus_anatinus
ENSGAFG00000011853	rtca	99	71.585	ENSOCUG00000014247	RTCA	100	71.585	Oryctolagus_cuniculus
ENSGAFG00000011853	rtca	99	90.110	ENSORLG00000013605	rtca	100	90.110	Oryzias_latipes
ENSGAFG00000011853	rtca	99	90.385	ENSORLG00020001904	rtca	100	90.385	Oryzias_latipes_hni
ENSGAFG00000011853	rtca	99	90.110	ENSORLG00015021064	rtca	100	90.110	Oryzias_latipes_hsok
ENSGAFG00000011853	rtca	99	90.110	ENSOMEG00000000756	rtca	100	90.110	Oryzias_melastigma
ENSGAFG00000011853	rtca	99	66.393	ENSOGAG00000005627	RTCA	100	66.393	Otolemur_garnettii
ENSGAFG00000011853	rtca	86	72.327	ENSOARG00000018122	RTCA	100	72.327	Ovis_aries
ENSGAFG00000011853	rtca	99	68.338	ENSPPAG00000035119	RTCA	100	70.874	Pan_paniscus
ENSGAFG00000011853	rtca	99	71.585	ENSPPRG00000000350	RTCA	100	71.585	Panthera_pardus
ENSGAFG00000011853	rtca	99	71.311	ENSPTIG00000012816	RTCA	100	71.311	Panthera_tigris_altaica
ENSGAFG00000011853	rtca	99	68.338	ENSPTRG00000001004	RTCA	100	70.874	Pan_troglodytes
ENSGAFG00000011853	rtca	99	71.585	ENSPANG00000000346	RTCA	100	71.585	Papio_anubis
ENSGAFG00000011853	rtca	99	79.670	ENSPKIG00000001653	rtca	100	79.670	Paramormyrops_kingsleyae
ENSGAFG00000011853	rtca	99	67.671	ENSPSIG00000011408	RTCA	100	67.671	Pelodiscus_sinensis
ENSGAFG00000011853	rtca	99	70.219	ENSPEMG00000018582	Rtca	100	70.219	Peromyscus_maniculatus_bairdii
ENSGAFG00000011853	rtca	98	55.125	ENSPMAG00000009110	rtca	98	55.125	Petromyzon_marinus
ENSGAFG00000011853	rtca	99	71.311	ENSPCIG00000007684	RTCA	100	71.311	Phascolarctos_cinereus
ENSGAFG00000011853	rtca	99	97.808	ENSPFOG00000004824	rtca	100	97.808	Poecilia_formosa
ENSGAFG00000011853	rtca	100	97.814	ENSPLAG00000011753	rtca	100	97.814	Poecilia_latipinna
ENSGAFG00000011853	rtca	100	97.814	ENSPMEG00000020469	rtca	100	97.814	Poecilia_mexicana
ENSGAFG00000011853	rtca	100	97.814	ENSPREG00000001365	rtca	100	97.814	Poecilia_reticulata
ENSGAFG00000011853	rtca	99	71.585	ENSPPYG00000001115	RTCA	100	71.585	Pongo_abelii
ENSGAFG00000011853	rtca	99	68.579	ENSPCAG00000005076	RTCA	100	68.579	Procavia_capensis
ENSGAFG00000011853	rtca	99	71.858	ENSPCOG00000005603	RTCA	100	71.858	Propithecus_coquereli
ENSGAFG00000011853	rtca	99	67.282	ENSPVAG00000009478	RTCA	100	67.282	Pteropus_vampyrus
ENSGAFG00000011853	rtca	100	90.437	ENSPNYG00000004722	rtca	100	90.437	Pundamilia_nyererei
ENSGAFG00000011853	rtca	99	77.473	ENSPNAG00000022270	rtca	100	77.473	Pygocentrus_nattereri
ENSGAFG00000011853	rtca	99	69.672	ENSRNOG00000014575	Rtca	100	69.672	Rattus_norvegicus
ENSGAFG00000011853	rtca	99	68.602	ENSRBIG00000041180	RTCA	100	71.197	Rhinopithecus_bieti
ENSGAFG00000011853	rtca	99	71.038	ENSRROG00000024929	RTCA	100	71.038	Rhinopithecus_roxellana
ENSGAFG00000011853	rtca	99	70.492	ENSSBOG00000028626	RTCA	100	70.492	Saimiri_boliviensis_boliviensis
ENSGAFG00000011853	rtca	99	71.311	ENSSHAG00000001758	RTCA	100	71.311	Sarcophilus_harrisii
ENSGAFG00000011853	rtca	99	86.704	ENSSMAG00000014680	rtca	98	86.704	Scophthalmus_maximus
ENSGAFG00000011853	rtca	98	90.782	ENSSDUG00000015585	rtca	98	90.331	Seriola_dumerili
ENSGAFG00000011853	rtca	95	91.404	ENSSLDG00000018985	rtca	95	91.404	Seriola_lalandi_dorsalis
ENSGAFG00000011853	rtca	86	67.508	ENSSARG00000013993	RTCA	100	67.508	Sorex_araneus
ENSGAFG00000011853	rtca	100	90.984	ENSSPAG00000011938	rtca	100	90.984	Stegastes_partitus
ENSGAFG00000011853	rtca	99	71.858	ENSSSCG00000006865	RTCA	100	71.858	Sus_scrofa
ENSGAFG00000011853	rtca	99	68.767	ENSTGUG00000005154	RTCA	100	68.767	Taeniopygia_guttata
ENSGAFG00000011853	rtca	99	88.187	ENSTRUG00000008799	rtca	100	88.187	Takifugu_rubripes
ENSGAFG00000011853	rtca	99	86.538	ENSTNIG00000004725	rtca	100	86.538	Tetraodon_nigroviridis
ENSGAFG00000011853	rtca	57	57.143	ENSTBEG00000000943	RTCA	59	57.143	Tupaia_belangeri
ENSGAFG00000011853	rtca	99	69.393	ENSTTRG00000015327	RTCA	100	69.393	Tursiops_truncatus
ENSGAFG00000011853	rtca	95	69.741	ENSUAMG00000017265	RTCA	97	69.741	Ursus_americanus
ENSGAFG00000011853	rtca	99	71.038	ENSUMAG00000007881	RTCA	100	71.038	Ursus_maritimus
ENSGAFG00000011853	rtca	86	64.038	ENSVPAG00000001039	RTCA	84	64.038	Vicugna_pacos
ENSGAFG00000011853	rtca	99	71.038	ENSVVUG00000022041	RTCA	68	71.038	Vulpes_vulpes
ENSGAFG00000011853	rtca	99	57.766	ENSXETG00000031661	RTCA	99	57.766	Xenopus_tropicalis
ENSGAFG00000011853	rtca	99	86.813	ENSXCOG00000008002	rtca	100	86.813	Xiphophorus_couchianus
ENSGAFG00000011853	rtca	100	98.361	ENSXMAG00000005482	rtca	100	98.361	Xiphophorus_maculatus