EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000011862 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 13758 bases
Position: chrNHOQ01000160.1:2063789-2077546
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017531	TRM	PF02005.16	2e-138	1	1
ENSGAFP00000017538	TRM	PF02005.16	9.6e-130	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017701	-	4508	-	ENSGAFP00000017531	636 (aa)	-	-
ENSGAFT00000017708	-	1827	-	ENSGAFP00000017538	608 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011862	trmt1	88	68.692	ENSG00000104907	TRMT1	100	75.521	Homo_sapiens
ENSGAFG00000011862	trmt1	89	67.470	ENSAMEG00000012598	TRMT1	86	67.069	Ailuropoda_melanoleuca
ENSGAFG00000011862	trmt1	95	79.112	ENSACIG00000018680	trmt1	95	79.112	Amphilophus_citrinellus
ENSGAFG00000011862	trmt1	100	81.118	ENSAOCG00000006781	trmt1	100	81.118	Amphiprion_ocellaris
ENSGAFG00000011862	trmt1	100	81.269	ENSAPEG00000007712	trmt1	100	81.269	Amphiprion_percula
ENSGAFG00000011862	trmt1	100	80.149	ENSATEG00000001872	trmt1	100	80.149	Anabas_testudineus
ENSGAFG00000011862	trmt1	89	68.935	ENSACAG00000003825	TRMT1	93	68.761	Anolis_carolinensis
ENSGAFG00000011862	trmt1	88	66.725	ENSANAG00000023016	TRMT1	92	66.200	Aotus_nancymaae
ENSGAFG00000011862	trmt1	98	81.571	ENSACLG00000010073	trmt1	100	81.250	Astatotilapia_calliptera
ENSGAFG00000011862	trmt1	97	76.763	ENSAMXG00000012026	trmt1	92	76.603	Astyanax_mexicanus
ENSGAFG00000011862	trmt1	92	66.054	ENSBTAG00000019325	TRMT1	85	65.886	Bos_taurus
ENSGAFG00000011862	trmt1	83	40.782	WBGene00006613	trm-1	96	40.410	Caenorhabditis_elegans
ENSGAFG00000011862	trmt1	88	65.993	ENSCJAG00000004566	TRMT1	88	65.217	Callithrix_jacchus
ENSGAFG00000011862	trmt1	89	67.642	ENSCAFG00000017070	TRMT1	91	67.241	Canis_familiaris
ENSGAFG00000011862	trmt1	89	68.116	ENSCAFG00020005397	TRMT1	89	66.955	Canis_lupus_dingo
ENSGAFG00000011862	trmt1	90	66.781	ENSCHIG00000013569	TRMT1	87	66.610	Capra_hircus
ENSGAFG00000011862	trmt1	88	65.872	ENSTSYG00000003207	TRMT1	87	65.324	Carlito_syrichta
ENSGAFG00000011862	trmt1	82	63.653	ENSCAPG00000003355	TRMT1	94	63.653	Cavia_aperea
ENSGAFG00000011862	trmt1	90	66.267	ENSCPOG00000011754	TRMT1	88	66.267	Cavia_porcellus
ENSGAFG00000011862	trmt1	88	65.683	ENSCCAG00000022263	TRMT1	92	64.799	Cebus_capucinus
ENSGAFG00000011862	trmt1	88	68.007	ENSCATG00000039850	TRMT1	86	68.007	Cercocebus_atys
ENSGAFG00000011862	trmt1	78	58.009	ENSCATG00000038220	-	90	58.009	Cercocebus_atys
ENSGAFG00000011862	trmt1	92	65.940	ENSCLAG00000015295	TRMT1	92	62.689	Chinchilla_lanigera
ENSGAFG00000011862	trmt1	74	70.737	ENSCSAG00000006500	TRMT1	89	70.737	Chlorocebus_sabaeus
ENSGAFG00000011862	trmt1	88	70.996	ENSCPBG00000023866	TRMT1	85	70.996	Chrysemys_picta_bellii
ENSGAFG00000011862	trmt1	86	48.364	ENSCING00000002884	-	98	48.364	Ciona_intestinalis
ENSGAFG00000011862	trmt1	84	50.741	ENSCSAVG00000010927	-	100	49.444	Ciona_savignyi
ENSGAFG00000011862	trmt1	88	53.403	ENSCANG00000040631	TRMT1	86	53.403	Colobus_angolensis_palliatus
ENSGAFG00000011862	trmt1	85	53.623	ENSCANG00000031650	-	86	53.442	Colobus_angolensis_palliatus
ENSGAFG00000011862	trmt1	92	65.210	ENSCGRG00001022594	Trmt1	91	65.546	Cricetulus_griseus_chok1gshd
ENSGAFG00000011862	trmt1	92	65.210	ENSCGRG00000017732	Trmt1	89	65.901	Cricetulus_griseus_crigri
ENSGAFG00000011862	trmt1	94	83.500	ENSCSEG00000001643	trmt1	90	83.500	Cynoglossus_semilaevis
ENSGAFG00000011862	trmt1	100	84.802	ENSCVAG00000011886	trmt1	100	84.802	Cyprinodon_variegatus
ENSGAFG00000011862	trmt1	94	78.089	ENSDARG00000010978	trmt1	90	77.073	Danio_rerio
ENSGAFG00000011862	trmt1	80	46.008	ENSDNOG00000048240	-	89	45.247	Dasypus_novemcinctus
ENSGAFG00000011862	trmt1	89	65.336	ENSDORG00000014298	Trmt1	87	65.336	Dipodomys_ordii
ENSGAFG00000011862	trmt1	86	46.263	FBgn0032430	CG6388	94	45.907	Drosophila_melanogaster
ENSGAFG00000011862	trmt1	80	51.772	ENSEBUG00000003449	trmt1	75	52.469	Eptatretus_burgeri
ENSGAFG00000011862	trmt1	94	65.246	ENSEASG00005004050	TRMT1	95	64.860	Equus_asinus_asinus
ENSGAFG00000011862	trmt1	94	65.246	ENSECAG00000016149	TRMT1	95	64.860	Equus_caballus
ENSGAFG00000011862	trmt1	61	58.228	ENSEEUG00000014102	-	100	58.228	Erinaceus_europaeus
ENSGAFG00000011862	trmt1	99	69.520	ENSELUG00000021659	trmt1	99	69.369	Esox_lucius
ENSGAFG00000011862	trmt1	89	66.727	ENSFCAG00000000483	TRMT1	88	66.667	Felis_catus
ENSGAFG00000011862	trmt1	90	67.010	ENSFDAG00000007386	TRMT1	88	66.838	Fukomys_damarensis
ENSGAFG00000011862	trmt1	90	85.284	ENSFHEG00000012865	trmt1	100	85.284	Fundulus_heteroclitus
ENSGAFG00000011862	trmt1	89	74.074	ENSGMOG00000006564	trmt1	99	74.250	Gadus_morhua
ENSGAFG00000011862	trmt1	92	80.000	ENSGACG00000000227	trmt1	96	80.000	Gasterosteus_aculeatus
ENSGAFG00000011862	trmt1	88	71.277	ENSGAGG00000016432	TRMT1	95	64.734	Gopherus_agassizii
ENSGAFG00000011862	trmt1	88	68.692	ENSGGOG00000014007	TRMT1	87	68.237	Gorilla_gorilla
ENSGAFG00000011862	trmt1	86	77.960	ENSHBUG00000008821	trmt1	92	77.596	Haplochromis_burtoni
ENSGAFG00000011862	trmt1	92	65.327	ENSHGLG00000015972	TRMT1	90	65.101	Heterocephalus_glaber_female
ENSGAFG00000011862	trmt1	92	61.092	ENSHGLG00100018112	TRMT1	90	60.637	Heterocephalus_glaber_male
ENSGAFG00000011862	trmt1	97	77.832	ENSHCOG00000009447	trmt1	95	77.832	Hippocampus_comes
ENSGAFG00000011862	trmt1	92	75.124	ENSIPUG00000002899	trmt1	87	74.959	Ictalurus_punctatus
ENSGAFG00000011862	trmt1	90	66.381	ENSSTOG00000012531	TRMT1	88	66.381	Ictidomys_tridecemlineatus
ENSGAFG00000011862	trmt1	93	65.104	ENSJJAG00000017154	Trmt1	92	64.151	Jaculus_jaculus
ENSGAFG00000011862	trmt1	99	82.648	ENSKMAG00000011809	trmt1	98	86.106	Kryptolebias_marmoratus
ENSGAFG00000011862	trmt1	100	78.092	ENSLBEG00000012703	trmt1	100	77.794	Labrus_bergylta
ENSGAFG00000011862	trmt1	89	62.653	ENSLACG00000014585	TRMT1	94	62.304	Latimeria_chalumnae
ENSGAFG00000011862	trmt1	89	72.056	ENSLOCG00000006479	trmt1	99	71.880	Lepisosteus_oculatus
ENSGAFG00000011862	trmt1	90	67.925	ENSLAFG00000014072	TRMT1	89	67.238	Loxodonta_africana
ENSGAFG00000011862	trmt1	88	68.007	ENSMFAG00000033143	TRMT1	86	68.007	Macaca_fascicularis
ENSGAFG00000011862	trmt1	88	66.543	ENSMMUG00000001167	TRMT1	86	66.543	Macaca_mulatta
ENSGAFG00000011862	trmt1	88	68.007	ENSMNEG00000037867	TRMT1	86	68.007	Macaca_nemestrina
ENSGAFG00000011862	trmt1	88	68.324	ENSMLEG00000016142	TRMT1	87	67.832	Mandrillus_leucophaeus
ENSGAFG00000011862	trmt1	98	83.861	ENSMAMG00000004357	trmt1	95	83.544	Mastacembelus_armatus
ENSGAFG00000011862	trmt1	100	80.273	ENSMZEG00005014510	trmt1	100	79.970	Maylandia_zebra
ENSGAFG00000011862	trmt1	94	64.309	ENSMAUG00000011134	Trmt1	91	64.249	Mesocricetus_auratus
ENSGAFG00000011862	trmt1	89	68.096	ENSMICG00000000793	TRMT1	88	67.581	Microcebus_murinus
ENSGAFG00000011862	trmt1	90	66.495	ENSMOCG00000015895	Trmt1	87	66.495	Microtus_ochrogaster
ENSGAFG00000011862	trmt1	95	82.459	ENSMMOG00000011097	trmt1	99	82.459	Mola_mola
ENSGAFG00000011862	trmt1	90	68.621	ENSMODG00000011619	TRMT1	94	68.034	Monodelphis_domestica
ENSGAFG00000011862	trmt1	92	66.779	MGP_CAROLIEiJ_G0031304	Trmt1	97	61.569	Mus_caroli
ENSGAFG00000011862	trmt1	92	66.891	ENSMUSG00000001909	Trmt1	90	66.498	Mus_musculus
ENSGAFG00000011862	trmt1	92	66.442	MGP_SPRETEiJ_G0032422	Trmt1	97	61.417	Mus_spretus
ENSGAFG00000011862	trmt1	89	68.205	ENSMPUG00000004210	TRMT1	83	67.808	Mustela_putorius_furo
ENSGAFG00000011862	trmt1	89	68.348	ENSMLUG00000012809	TRMT1	86	68.403	Myotis_lucifugus
ENSGAFG00000011862	trmt1	89	67.012	ENSNGAG00000022486	Trmt1	87	66.667	Nannospalax_galili
ENSGAFG00000011862	trmt1	78	90.000	ENSNBRG00000024376	trmt1	87	90.000	Neolamprologus_brichardi
ENSGAFG00000011862	trmt1	72	67.596	ENSNLEG00000013019	-	83	67.247	Nomascus_leucogenys
ENSGAFG00000011862	trmt1	90	67.826	ENSMEUG00000013756	TRMT1	98	67.826	Notamacropus_eugenii
ENSGAFG00000011862	trmt1	72	74.000	ENSOPRG00000009471	-	71	74.000	Ochotona_princeps
ENSGAFG00000011862	trmt1	88	67.601	ENSODEG00000010323	TRMT1	87	67.601	Octodon_degus
ENSGAFG00000011862	trmt1	100	83.005	ENSONIG00000000400	trmt1	99	85.597	Oreochromis_niloticus
ENSGAFG00000011862	trmt1	75	70.226	ENSOCUG00000021934	TRMT1	93	68.600	Oryctolagus_cuniculus
ENSGAFG00000011862	trmt1	99	76.766	ENSORLG00000020074	trmt1	100	76.766	Oryzias_latipes
ENSGAFG00000011862	trmt1	96	81.994	ENSORLG00020007561	trmt1	96	82.810	Oryzias_latipes_hni
ENSGAFG00000011862	trmt1	96	81.511	ENSORLG00015006547	trmt1	95	81.511	Oryzias_latipes_hsok
ENSGAFG00000011862	trmt1	96	82.362	ENSOMEG00000019343	trmt1	95	82.362	Oryzias_melastigma
ENSGAFG00000011862	trmt1	88	68.412	ENSOGAG00000025576	TRMT1	90	68.412	Otolemur_garnettii
ENSGAFG00000011862	trmt1	92	55.594	ENSOARG00000009397	TRMT1	83	55.440	Ovis_aries
ENSGAFG00000011862	trmt1	89	60.172	ENSPPRG00000012117	TRMT1	88	59.783	Panthera_pardus
ENSGAFG00000011862	trmt1	71	68.601	ENSPTIG00000008833	TRMT1	84	67.354	Panthera_tigris_altaica
ENSGAFG00000011862	trmt1	88	68.692	ENSPTRG00000010557	TRMT1	87	68.237	Pan_troglodytes
ENSGAFG00000011862	trmt1	86	50.526	ENSPTRG00000050421	-	89	50.000	Pan_troglodytes
ENSGAFG00000011862	trmt1	88	68.508	ENSPANG00000009247	TRMT1	87	68.007	Papio_anubis
ENSGAFG00000011862	trmt1	68	59.368	ENSPANG00000034058	-	78	59.234	Papio_anubis
ENSGAFG00000011862	trmt1	95	75.450	ENSPKIG00000005309	trmt1	91	75.450	Paramormyrops_kingsleyae
ENSGAFG00000011862	trmt1	87	58.803	ENSPSIG00000008762	TRMT1	82	58.803	Pelodiscus_sinensis
ENSGAFG00000011862	trmt1	89	84.574	ENSPMGG00000019764	trmt1	91	84.397	Periophthalmus_magnuspinnatus
ENSGAFG00000011862	trmt1	94	65.246	ENSPEMG00000016247	Trmt1	91	65.246	Peromyscus_maniculatus_bairdii
ENSGAFG00000011862	trmt1	89	63.410	ENSPMAG00000004329	trmt1	90	63.410	Petromyzon_marinus
ENSGAFG00000011862	trmt1	93	67.172	ENSPCIG00000019273	TRMT1	92	66.611	Phascolarctos_cinereus
ENSGAFG00000011862	trmt1	100	94.523	ENSPFOG00000008527	trmt1	100	94.523	Poecilia_formosa
ENSGAFG00000011862	trmt1	100	93.427	ENSPLAG00000018788	trmt1	100	94.692	Poecilia_latipinna
ENSGAFG00000011862	trmt1	100	94.366	ENSPMEG00000013120	trmt1	100	94.366	Poecilia_mexicana
ENSGAFG00000011862	trmt1	99	93.049	ENSPREG00000000211	trmt1	96	93.049	Poecilia_reticulata
ENSGAFG00000011862	trmt1	88	68.063	ENSPPYG00000009622	TRMT1	87	67.888	Pongo_abelii
ENSGAFG00000011862	trmt1	92	61.745	ENSPCAG00000003698	TRMT1	91	61.745	Procavia_capensis
ENSGAFG00000011862	trmt1	88	68.140	ENSPCOG00000008653	TRMT1	87	67.483	Propithecus_coquereli
ENSGAFG00000011862	trmt1	90	67.295	ENSPVAG00000015076	TRMT1	89	67.009	Pteropus_vampyrus
ENSGAFG00000011862	trmt1	98	80.128	ENSPNYG00000013960	trmt1	100	79.808	Pundamilia_nyererei
ENSGAFG00000011862	trmt1	96	67.508	ENSPNAG00000024859	trmt1	99	67.508	Pygocentrus_nattereri
ENSGAFG00000011862	trmt1	92	65.882	ENSRNOG00000002914	Trmt1	92	65.882	Rattus_norvegicus
ENSGAFG00000011862	trmt1	88	68.126	ENSRBIG00000038324	TRMT1	86	68.126	Rhinopithecus_bieti
ENSGAFG00000011862	trmt1	85	51.613	ENSRBIG00000037505	-	87	51.799	Rhinopithecus_bieti
ENSGAFG00000011862	trmt1	85	50.991	ENSRROG00000031847	-	86	51.259	Rhinopithecus_roxellana
ENSGAFG00000011862	trmt1	88	68.126	ENSRROG00000028599	TRMT1	86	68.126	Rhinopithecus_roxellana
ENSGAFG00000011862	trmt1	79	38.606	YDR120C	-	92	38.606	Saccharomyces_cerevisiae
ENSGAFG00000011862	trmt1	88	65.867	ENSSBOG00000028861	TRMT1	92	65.035	Saimiri_boliviensis_boliviensis
ENSGAFG00000011862	trmt1	89	70.123	ENSSHAG00000014381	TRMT1	96	67.279	Sarcophilus_harrisii
ENSGAFG00000011862	trmt1	90	79.896	ENSSFOG00015004139	trmt1	85	79.896	Scleropages_formosus
ENSGAFG00000011862	trmt1	100	79.010	ENSSMAG00000021136	trmt1	100	79.310	Scophthalmus_maximus
ENSGAFG00000011862	trmt1	100	81.194	ENSSDUG00000012740	trmt1	100	80.896	Seriola_dumerili
ENSGAFG00000011862	trmt1	100	80.896	ENSSLDG00000005971	trmt1	100	81.045	Seriola_lalandi_dorsalis
ENSGAFG00000011862	trmt1	80	66.408	ENSSARG00000005138	TRMT1	91	66.214	Sorex_araneus
ENSGAFG00000011862	trmt1	90	54.059	ENSSPUG00000001084	TRMT1	91	54.017	Sphenodon_punctatus
ENSGAFG00000011862	trmt1	100	79.456	ENSSPAG00000007153	trmt1	99	85.473	Stegastes_partitus
ENSGAFG00000011862	trmt1	94	65.625	ENSSSCG00000013744	TRMT1	95	64.909	Sus_scrofa
ENSGAFG00000011862	trmt1	97	73.684	ENSTRUG00000010700	trmt1	96	73.839	Takifugu_rubripes
ENSGAFG00000011862	trmt1	89	85.009	ENSTNIG00000018808	trmt1	98	85.009	Tetraodon_nigroviridis
ENSGAFG00000011862	trmt1	90	64.666	ENSTTRG00000006379	TRMT1	88	64.384	Tursiops_truncatus
ENSGAFG00000011862	trmt1	89	68.116	ENSUAMG00000022911	TRMT1	95	64.726	Ursus_americanus
ENSGAFG00000011862	trmt1	89	67.814	ENSUMAG00000006027	TRMT1	91	67.414	Ursus_maritimus
ENSGAFG00000011862	trmt1	89	67.814	ENSVVUG00000024177	TRMT1	87	67.414	Vulpes_vulpes
ENSGAFG00000011862	trmt1	72	70.217	ENSXETG00000033863	TRMT1	92	70.000	Xenopus_tropicalis
ENSGAFG00000011862	trmt1	100	96.557	ENSXCOG00000015733	trmt1	100	96.557	Xiphophorus_couchianus
ENSGAFG00000011862	trmt1	90	97.723	ENSXMAG00000013823	trmt1	99	97.723	Xiphophorus_maculatus