EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000011998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 2645 bases
Position: chrNHOQ01002094.1:6521533-6524177
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017723	zf-C2H2	PF00096.26	5.7e-20	1	4
ENSGAFP00000017723	zf-C2H2	PF00096.26	5.7e-20	2	4
ENSGAFP00000017723	zf-C2H2	PF00096.26	5.7e-20	3	4
ENSGAFP00000017723	zf-C2H2	PF00096.26	5.7e-20	4	4
ENSGAFP00000017723	zf-met	PF12874.7	1.9e-07	1	2
ENSGAFP00000017723	zf-met	PF12874.7	1.9e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017894	-	2425	-	ENSGAFP00000017723	389 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000011998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000011998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000011998	-	74	47.059	ENSGAFG00000018820	-	96	47.059
ENSGAFG00000011998	-	69	45.455	ENSGAFG00000013677	-	98	46.491
ENSGAFG00000011998	-	51	43.902	ENSGAFG00000013408	-	92	43.902
ENSGAFG00000011998	-	98	46.809	ENSGAFG00000010983	-	98	46.809
ENSGAFG00000011998	-	96	36.893	ENSGAFG00000012545	-	96	36.893
ENSGAFG00000011998	-	90	49.254	ENSGAFG00000019035	-	66	49.254
ENSGAFG00000011998	-	96	46.575	ENSGAFG00000020505	-	84	46.575
ENSGAFG00000011998	-	96	35.106	ENSGAFG00000020507	-	98	35.106
ENSGAFG00000011998	-	66	51.261	ENSGAFG00000020503	-	65	51.261
ENSGAFG00000011998	-	89	54.839	ENSGAFG00000013934	-	98	55.645
ENSGAFG00000011998	-	96	54.478	ENSGAFG00000016976	-	100	54.478
ENSGAFG00000011998	-	75	53.659	ENSGAFG00000011940	-	93	53.659
ENSGAFG00000011998	-	56	44.361	ENSGAFG00000011174	-	75	44.361
ENSGAFG00000011998	-	93	51.493	ENSGAFG00000007104	-	98	51.493
ENSGAFG00000011998	-	60	48.333	ENSGAFG00000003150	-	84	46.875
ENSGAFG00000011998	-	66	50.000	ENSGAFG00000016595	-	97	50.000
ENSGAFG00000011998	-	66	54.545	ENSGAFG00000013363	-	93	54.545
ENSGAFG00000011998	-	65	47.967	ENSGAFG00000011999	-	97	47.967
ENSGAFG00000011998	-	74	39.091	ENSGAFG00000018340	-	58	38.971
ENSGAFG00000011998	-	66	43.478	ENSGAFG00000013420	-	88	43.478
ENSGAFG00000011998	-	67	37.548	ENSGAFG00000001879	-	96	37.548
ENSGAFG00000011998	-	61	46.667	ENSGAFG00000013491	-	68	46.667
ENSGAFG00000011998	-	70	54.074	ENSGAFG00000011944	-	89	54.074
ENSGAFG00000011998	-	96	36.111	ENSGAFG00000004319	-	98	36.111
ENSGAFG00000011998	-	99	52.239	ENSGAFG00000008274	-	98	52.239
ENSGAFG00000011998	-	65	47.059	ENSGAFG00000012035	-	92	46.341
ENSGAFG00000011998	-	96	40.230	ENSGAFG00000013366	-	99	40.230
ENSGAFG00000011998	-	54	55.285	ENSGAFG00000007098	-	97	55.285
ENSGAFG00000011998	-	54	33.333	ENSGAFG00000007636	scrt1b	79	33.333
ENSGAFG00000011998	-	70	45.255	ENSGAFG00000011938	-	96	45.255
ENSGAFG00000011998	-	69	47.619	ENSGAFG00000013066	-	99	47.619
ENSGAFG00000011998	-	97	50.746	ENSGAFG00000008226	-	99	50.746
ENSGAFG00000011998	-	51	49.123	ENSGAFG00000005337	-	99	41.026
ENSGAFG00000011998	-	96	57.447	ENSGAFG00000011326	-	99	57.447
ENSGAFG00000011998	-	51	56.897	ENSGAFG00000011965	-	74	56.897
ENSGAFG00000011998	-	98	40.678	ENSGAFG00000018422	-	95	40.678
ENSGAFG00000011998	-	74	50.575	ENSGAFG00000011906	-	81	50.575
ENSGAFG00000011998	-	71	43.396	ENSGAFG00000011287	-	98	43.396
ENSGAFG00000011998	-	87	50.376	ENSGAFG00000011288	-	100	50.376
ENSGAFG00000011998	-	96	34.307	ENSGAFG00000020501	-	98	42.424
ENSGAFG00000011998	-	63	50.000	ENSGAFG00000019072	-	98	50.000
ENSGAFG00000011998	-	54	50.685	ENSGAFG00000021140	-	100	50.685
ENSGAFG00000011998	-	50	40.000	ENSGAFG00000021427	snai2	68	40.000
ENSGAFG00000011998	-	62	42.748	ENSGAFG00000012934	-	89	42.748
ENSGAFG00000011998	-	68	49.533	ENSGAFG00000012054	-	72	49.533
ENSGAFG00000011998	-	66	52.632	ENSGAFG00000018645	-	78	52.632
ENSGAFG00000011998	-	52	31.466	ENSGAFG00000003093	scrt2	75	31.466
ENSGAFG00000011998	-	69	40.602	ENSGAFG00000013462	-	85	40.602
ENSGAFG00000011998	-	64	43.046	ENSGAFG00000014362	-	79	43.046
ENSGAFG00000011998	-	56	43.810	ENSGAFG00000014369	-	92	49.600
ENSGAFG00000011998	-	63	49.107	ENSGAFG00000021132	-	68	49.107
ENSGAFG00000011998	-	55	53.659	ENSGAFG00000021131	-	93	53.659
ENSGAFG00000011998	-	96	32.508	ENSGAFG00000017066	-	98	32.508
ENSGAFG00000011998	-	76	51.111	ENSGAFG00000020499	-	97	51.111
ENSGAFG00000011998	-	87	52.083	ENSGAFG00000007110	-	97	52.083
ENSGAFG00000011998	-	98	35.938	ENSGAFG00000008204	-	83	35.938
ENSGAFG00000011998	-	70	47.407	ENSGAFG00000013452	-	88	47.407
ENSGAFG00000011998	-	64	52.885	ENSGAFG00000010524	-	85	52.885
ENSGAFG00000011998	-	65	47.748	ENSGAFG00000011924	-	86	47.748
ENSGAFG00000011998	-	74	46.667	ENSGAFG00000012004	-	87	46.667
ENSGAFG00000011998	-	69	52.212	ENSGAFG00000011884	-	97	52.212
ENSGAFG00000011998	-	97	47.967	ENSGAFG00000008231	-	99	50.746
ENSGAFG00000011998	-	68	32.042	ENSGAFG00000014563	-	94	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000011998	-	66	48.673	ENSAPOG00000019138	-	81	48.673	Acanthochromis_polyacanthus
ENSGAFG00000011998	-	96	46.218	ENSACIG00000004641	-	96	46.218	Amphilophus_citrinellus
ENSGAFG00000011998	-	71	42.969	ENSAOCG00000016897	-	88	42.969	Amphiprion_ocellaris
ENSGAFG00000011998	-	95	45.370	ENSAPEG00000018762	-	98	46.667	Amphiprion_percula
ENSGAFG00000011998	-	71	49.123	ENSAPEG00000001556	-	88	42.969	Amphiprion_percula
ENSGAFG00000011998	-	55	49.367	ENSATEG00000018931	-	92	49.367	Anabas_testudineus
ENSGAFG00000011998	-	65	42.308	ENSCSEG00000008528	-	68	42.308	Cynoglossus_semilaevis
ENSGAFG00000011998	-	97	36.104	ENSCVAG00000006484	-	97	36.104	Cyprinodon_variegatus
ENSGAFG00000011998	-	84	48.305	ENSELUG00000020882	-	83	48.305	Esox_lucius
ENSGAFG00000011998	-	65	36.759	ENSFHEG00000023184	-	80	36.759	Fundulus_heteroclitus
ENSGAFG00000011998	-	96	48.148	ENSHCOG00000019389	-	98	48.148	Hippocampus_comes
ENSGAFG00000011998	-	68	45.946	ENSHCOG00000001873	-	87	45.946	Hippocampus_comes
ENSGAFG00000011998	-	68	45.946	ENSHCOG00000008550	-	87	45.946	Hippocampus_comes
ENSGAFG00000011998	-	95	48.750	ENSHCOG00000008227	-	92	48.750	Hippocampus_comes
ENSGAFG00000011998	-	78	50.962	ENSHCOG00000013489	-	80	43.939	Hippocampus_comes
ENSGAFG00000011998	-	96	32.955	ENSKMAG00000021873	-	99	32.955	Kryptolebias_marmoratus
ENSGAFG00000011998	-	96	45.690	ENSLBEG00000011210	-	86	45.690	Labrus_bergylta
ENSGAFG00000011998	-	55	41.379	ENSLOCG00000004208	-	98	41.379	Lepisosteus_oculatus
ENSGAFG00000011998	-	96	51.087	ENSMMOG00000017592	-	91	51.087	Mola_mola
ENSGAFG00000011998	-	68	34.082	ENSNBRG00000006112	-	69	34.082	Neolamprologus_brichardi
ENSGAFG00000011998	-	50	41.096	ENSONIG00000005050	-	92	41.096	Oreochromis_niloticus
ENSGAFG00000011998	-	57	41.964	ENSORLG00000002268	-	93	41.964	Oryzias_latipes
ENSGAFG00000011998	-	67	37.755	ENSORLG00020018921	-	71	37.755	Oryzias_latipes_hni
ENSGAFG00000011998	-	96	50.538	ENSORLG00020019227	-	94	50.538	Oryzias_latipes_hni
ENSGAFG00000011998	-	96	30.909	ENSPKIG00000005164	-	99	35.366	Paramormyrops_kingsleyae
ENSGAFG00000011998	-	97	35.766	ENSPFOG00000009491	-	100	35.766	Poecilia_formosa
ENSGAFG00000011998	-	71	48.333	ENSPLAG00000010067	-	92	48.333	Poecilia_latipinna
ENSGAFG00000011998	-	60	41.748	ENSPMEG00000002953	-	77	41.748	Poecilia_mexicana
ENSGAFG00000011998	-	96	40.230	ENSPMEG00000024117	-	99	40.230	Poecilia_mexicana
ENSGAFG00000011998	-	96	33.974	ENSPREG00000008907	-	99	33.974	Poecilia_reticulata
ENSGAFG00000011998	-	56	38.356	ENSPREG00000002603	-	99	38.356	Poecilia_reticulata
ENSGAFG00000011998	-	65	45.783	ENSPNYG00000017888	-	73	33.571	Pundamilia_nyererei
ENSGAFG00000011998	-	69	45.370	ENSSDUG00000020774	-	81	45.370	Seriola_dumerili
ENSGAFG00000011998	-	66	50.000	ENSSPAG00000005770	-	75	50.000	Stegastes_partitus