EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012012 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 32494 bases
Position: chrNHOQ01000541.1:2141789-2174282
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017752	La	PF05383.17	9.9e-22	1	1
ENSGAFP00000017757	La	PF05383.17	9.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000017924	-	2754	-	ENSGAFP00000017752	917 (aa)	-	-
ENSGAFT00000017929	-	4213	-	ENSGAFP00000017757	876 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012012	larp1b	93	58.324	ENSG00000138709	LARP1B	91	58.053	Homo_sapiens
ENSGAFG00000012012	larp1b	99	81.364	ENSAPOG00000020101	larp1b	89	82.299	Acanthochromis_polyacanthus
ENSGAFG00000012012	larp1b	57	56.126	ENSAMEG00000002748	LARP1B	89	55.664	Ailuropoda_melanoleuca
ENSGAFG00000012012	larp1b	96	81.358	ENSACIG00000023890	larp1b	89	81.408	Amphilophus_citrinellus
ENSGAFG00000012012	larp1b	84	81.889	ENSAOCG00000014268	larp1b	86	82.407	Amphiprion_ocellaris
ENSGAFG00000012012	larp1b	99	81.549	ENSAPEG00000004126	larp1b	89	82.672	Amphiprion_percula
ENSGAFG00000012012	larp1b	99	80.182	ENSATEG00000017849	larp1b	88	80.265	Anabas_testudineus
ENSGAFG00000012012	larp1b	77	68.750	ENSAPLG00000010129	LARP1B	81	68.750	Anas_platyrhynchos
ENSGAFG00000012012	larp1b	89	61.282	ENSACAG00000011338	LARP1B	81	60.617	Anolis_carolinensis
ENSGAFG00000012012	larp1b	77	53.361	ENSANAG00000034618	LARP1B	84	53.361	Aotus_nancymaae
ENSGAFG00000012012	larp1b	100	79.751	ENSACLG00000011948	larp1b	85	79.947	Astatotilapia_calliptera
ENSGAFG00000012012	larp1b	91	60.338	ENSAMXG00000006805	larp1b	79	65.199	Astyanax_mexicanus
ENSGAFG00000012012	larp1b	98	58.830	ENSBTAG00000012135	LARP1B	79	61.138	Bos_taurus
ENSGAFG00000012012	larp1b	94	58.284	ENSCJAG00000003338	LARP1B	93	58.984	Callithrix_jacchus
ENSGAFG00000012012	larp1b	98	59.459	ENSCAFG00000003831	LARP1B	90	60.660	Canis_familiaris
ENSGAFG00000012012	larp1b	98	59.147	ENSCAFG00020018899	LARP1B	90	60.282	Canis_lupus_dingo
ENSGAFG00000012012	larp1b	98	57.589	ENSCHIG00000023144	LARP1B	89	59.086	Capra_hircus
ENSGAFG00000012012	larp1b	94	58.053	ENSCCAG00000021948	LARP1B	91	58.053	Cebus_capucinus
ENSGAFG00000012012	larp1b	93	57.459	ENSCATG00000013541	LARP1B	91	57.193	Cercocebus_atys
ENSGAFG00000012012	larp1b	93	58.537	ENSCSAG00000003582	LARP1B	91	58.517	Chlorocebus_sabaeus
ENSGAFG00000012012	larp1b	88	57.673	ENSCHOG00000005354	LARP1B	84	59.021	Choloepus_hoffmanni
ENSGAFG00000012012	larp1b	91	60.482	ENSCPBG00000017480	LARP1B	75	63.107	Chrysemys_picta_bellii
ENSGAFG00000012012	larp1b	86	59.926	ENSCANG00000026958	LARP1B	81	61.339	Colobus_angolensis_palliatus
ENSGAFG00000012012	larp1b	99	77.702	ENSCSEG00000013519	larp1b	84	80.132	Cynoglossus_semilaevis
ENSGAFG00000012012	larp1b	100	86.523	ENSCVAG00000005046	larp1b	89	82.051	Cyprinodon_variegatus
ENSGAFG00000012012	larp1b	93	68.000	ENSDARG00000061169	larp1b	81	70.319	Danio_rerio
ENSGAFG00000012012	larp1b	52	55.098	ENSDNOG00000018765	-	86	55.098	Dasypus_novemcinctus
ENSGAFG00000012012	larp1b	76	54.043	ENSETEG00000012497	LARP1B	72	55.341	Echinops_telfairi
ENSGAFG00000012012	larp1b	81	50.318	ENSEBUG00000003668	larp1b	76	52.017	Eptatretus_burgeri
ENSGAFG00000012012	larp1b	98	58.082	ENSEASG00005018106	LARP1B	94	57.748	Equus_asinus_asinus
ENSGAFG00000012012	larp1b	98	58.983	ENSECAG00000001088	LARP1B	77	58.656	Equus_caballus
ENSGAFG00000012012	larp1b	75	63.043	ENSELUG00000023774	larp1b	99	54.515	Esox_lucius
ENSGAFG00000012012	larp1b	53	55.626	ENSFCAG00000014650	-	89	54.098	Felis_catus
ENSGAFG00000012012	larp1b	94	56.591	ENSFALG00000008098	LARP1B	89	57.025	Ficedula_albicollis
ENSGAFG00000012012	larp1b	100	87.330	ENSFHEG00000010264	larp1b	86	85.979	Fundulus_heteroclitus
ENSGAFG00000012012	larp1b	82	75.725	ENSGMOG00000005207	larp1b	75	76.087	Gadus_morhua
ENSGAFG00000012012	larp1b	94	56.381	ENSGALG00000010207	LARP1B	78	58.384	Gallus_gallus
ENSGAFG00000012012	larp1b	99	69.704	ENSGACG00000004609	larp1b	86	72.357	Gasterosteus_aculeatus
ENSGAFG00000012012	larp1b	91	60.361	ENSGAGG00000017209	LARP1B	74	63.347	Gopherus_agassizii
ENSGAFG00000012012	larp1b	93	58.207	ENSGGOG00000015900	LARP1B	91	57.937	Gorilla_gorilla
ENSGAFG00000012012	larp1b	100	79.841	ENSHBUG00000009730	larp1b	90	80.053	Haplochromis_burtoni
ENSGAFG00000012012	larp1b	77	80.116	ENSHCOG00000000918	larp1b	97	80.029	Hippocampus_comes
ENSGAFG00000012012	larp1b	93	68.309	ENSIPUG00000012138	larp1b	83	69.018	Ictalurus_punctatus
ENSGAFG00000012012	larp1b	99	79.080	ENSKMAG00000011589	larp1b	89	80.805	Kryptolebias_marmoratus
ENSGAFG00000012012	larp1b	99	78.822	ENSLBEG00000005655	larp1b	89	78.920	Labrus_bergylta
ENSGAFG00000012012	larp1b	93	61.310	ENSLACG00000015247	LARP1B	77	66.950	Latimeria_chalumnae
ENSGAFG00000012012	larp1b	95	61.771	ENSLOCG00000010684	larp1b	86	60.914	Lepisosteus_oculatus
ENSGAFG00000012012	larp1b	93	58.741	ENSMFAG00000002218	LARP1B	91	58.469	Macaca_fascicularis
ENSGAFG00000012012	larp1b	93	58.625	ENSMMUG00000021347	LARP1B	91	58.633	Macaca_mulatta
ENSGAFG00000012012	larp1b	74	62.245	ENSMNEG00000030406	LARP1B	82	61.884	Macaca_nemestrina
ENSGAFG00000012012	larp1b	84	61.390	ENSMLEG00000009306	LARP1B	80	61.612	Mandrillus_leucophaeus
ENSGAFG00000012012	larp1b	97	81.988	ENSMAMG00000000081	larp1b	87	82.240	Mastacembelus_armatus
ENSGAFG00000012012	larp1b	89	81.178	ENSMZEG00005002545	larp1b	100	81.306	Maylandia_zebra
ENSGAFG00000012012	larp1b	88	53.260	ENSMGAG00000004809	LARP1B	90	53.506	Meleagris_gallopavo
ENSGAFG00000012012	larp1b	97	59.410	ENSMICG00000036111	LARP1B	91	60.681	Microcebus_murinus
ENSGAFG00000012012	larp1b	97	58.679	ENSMODG00000012300	LARP1B	74	60.329	Monodelphis_domestica
ENSGAFG00000012012	larp1b	99	80.708	ENSMALG00000003638	larp1b	88	81.217	Monopterus_albus
ENSGAFG00000012012	larp1b	98	59.347	ENSMPUG00000017365	LARP1B	74	60.282	Mustela_putorius_furo
ENSGAFG00000012012	larp1b	90	59.304	ENSMLUG00000010229	LARP1B	89	59.233	Myotis_lucifugus
ENSGAFG00000012012	larp1b	100	70.719	ENSNBRG00000023846	larp1b	100	71.036	Neolamprologus_brichardi
ENSGAFG00000012012	larp1b	95	57.094	ENSNLEG00000013819	LARP1B	90	58.412	Nomascus_leucogenys
ENSGAFG00000012012	larp1b	76	58.381	ENSMEUG00000010308	LARP1B	74	60.000	Notamacropus_eugenii
ENSGAFG00000012012	larp1b	95	50.288	ENSOPRG00000005478	LARP1B	89	52.449	Ochotona_princeps
ENSGAFG00000012012	larp1b	94	79.186	ENSONIG00000012386	larp1b	88	78.721	Oreochromis_niloticus
ENSGAFG00000012012	larp1b	98	56.742	ENSOCUG00000013330	LARP1B	90	58.099	Oryctolagus_cuniculus
ENSGAFG00000012012	larp1b	97	77.960	ENSORLG00000017954	larp1b	89	78.175	Oryzias_latipes
ENSGAFG00000012012	larp1b	98	77.431	ENSORLG00020013081	larp1b	84	78.175	Oryzias_latipes_hni
ENSGAFG00000012012	larp1b	99	76.984	ENSORLG00015009580	larp1b	89	77.997	Oryzias_latipes_hsok
ENSGAFG00000012012	larp1b	96	80.259	ENSOMEG00000004210	larp1b	89	80.371	Oryzias_melastigma
ENSGAFG00000012012	larp1b	92	60.706	ENSOGAG00000005771	LARP1B	91	59.345	Otolemur_garnettii
ENSGAFG00000012012	larp1b	97	57.303	ENSOARG00000015300	LARP1B	91	58.762	Ovis_aries
ENSGAFG00000012012	larp1b	93	58.324	ENSPPAG00000030439	LARP1B	91	58.333	Pan_paniscus
ENSGAFG00000012012	larp1b	53	55.626	ENSPPRG00000002743	-	86	55.626	Panthera_pardus
ENSGAFG00000012012	larp1b	53	55.414	ENSPTIG00000011225	LARP1B	86	55.414	Panthera_tigris_altaica
ENSGAFG00000012012	larp1b	93	58.440	ENSPTRG00000016437	LARP1B	91	58.169	Pan_troglodytes
ENSGAFG00000012012	larp1b	93	58.741	ENSPANG00000012488	LARP1B	91	58.469	Papio_anubis
ENSGAFG00000012012	larp1b	80	61.383	ENSPKIG00000014360	larp1b	81	61.684	Paramormyrops_kingsleyae
ENSGAFG00000012012	larp1b	90	60.832	ENSPSIG00000012885	LARP1B	86	60.343	Pelodiscus_sinensis
ENSGAFG00000012012	larp1b	83	75.497	ENSPMGG00000007207	larp1b	88	76.276	Periophthalmus_magnuspinnatus
ENSGAFG00000012012	larp1b	74	65.625	ENSPMAG00000002700	larp1b	82	65.625	Petromyzon_marinus
ENSGAFG00000012012	larp1b	97	58.659	ENSPCIG00000026516	LARP1B	94	64.903	Phascolarctos_cinereus
ENSGAFG00000012012	larp1b	100	92.342	ENSPFOG00000019519	larp1b	85	90.052	Poecilia_formosa
ENSGAFG00000012012	larp1b	54	95.560	ENSPFOG00000022837	-	75	90.751	Poecilia_formosa
ENSGAFG00000012012	larp1b	100	95.662	ENSPLAG00000007115	larp1b	85	93.057	Poecilia_latipinna
ENSGAFG00000012012	larp1b	100	95.320	ENSPMEG00000001224	larp1b	89	92.523	Poecilia_mexicana
ENSGAFG00000012012	larp1b	96	56.279	ENSPCAG00000007546	LARP1B	90	57.261	Procavia_capensis
ENSGAFG00000012012	larp1b	85	59.864	ENSPCOG00000021874	LARP1B	90	66.667	Propithecus_coquereli
ENSGAFG00000012012	larp1b	96	54.861	ENSPVAG00000005373	LARP1B	90	55.981	Pteropus_vampyrus
ENSGAFG00000012012	larp1b	89	80.202	ENSPNYG00000017357	larp1b	100	80.202	Pundamilia_nyererei
ENSGAFG00000012012	larp1b	94	64.855	ENSPNAG00000008823	larp1b	81	68.758	Pygocentrus_nattereri
ENSGAFG00000012012	larp1b	53	53.404	ENSRBIG00000039982	-	87	53.404	Rhinopithecus_bieti
ENSGAFG00000012012	larp1b	93	58.741	ENSRROG00000030771	LARP1B	91	58.469	Rhinopithecus_roxellana
ENSGAFG00000012012	larp1b	68	54.304	ENSSHAG00000014474	LARP1B	91	54.331	Sarcophilus_harrisii
ENSGAFG00000012012	larp1b	93	81.296	ENSSMAG00000006347	larp1b	84	80.649	Scophthalmus_maximus
ENSGAFG00000012012	larp1b	99	79.499	ENSSDUG00000004182	larp1b	89	79.973	Seriola_dumerili
ENSGAFG00000012012	larp1b	95	80.168	ENSSLDG00000014613	larp1b	93	79.609	Seriola_lalandi_dorsalis
ENSGAFG00000012012	larp1b	97	56.794	ENSSPUG00000011837	LARP1B	93	56.257	Sphenodon_punctatus
ENSGAFG00000012012	larp1b	99	82.066	ENSSPAG00000017772	larp1b	89	79.267	Stegastes_partitus
ENSGAFG00000012012	larp1b	93	59.150	ENSSSCG00000034280	LARP1B	89	79.545	Sus_scrofa
ENSGAFG00000012012	larp1b	82	60.519	ENSTGUG00000002098	-	84	61.864	Taeniopygia_guttata
ENSGAFG00000012012	larp1b	95	76.861	ENSTRUG00000005612	larp1b	85	80.836	Takifugu_rubripes
ENSGAFG00000012012	larp1b	93	73.793	ENSTNIG00000012398	larp1b	88	83.084	Tetraodon_nigroviridis
ENSGAFG00000012012	larp1b	67	61.053	ENSTBEG00000004177	LARP1B	67	61.053	Tupaia_belangeri
ENSGAFG00000012012	larp1b	94	56.481	ENSTTRG00000012984	LARP1B	89	57.536	Tursiops_truncatus
ENSGAFG00000012012	larp1b	98	59.009	ENSUMAG00000007373	LARP1B	90	60.235	Ursus_maritimus
ENSGAFG00000012012	larp1b	78	56.983	ENSVPAG00000007223	LARP1B	78	56.983	Vicugna_pacos
ENSGAFG00000012012	larp1b	98	59.301	ENSVVUG00000011307	LARP1B	93	59.326	Vulpes_vulpes
ENSGAFG00000012012	larp1b	93	54.545	ENSXETG00000022512	larp1b	78	60.584	Xenopus_tropicalis
ENSGAFG00000012012	larp1b	85	91.108	ENSXCOG00000004435	larp1b	100	78.197	Xiphophorus_couchianus
ENSGAFG00000012012	larp1b	100	96.918	ENSXMAG00000008150	larp1b	90	91.860	Xiphophorus_maculatus