EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012164 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6938 bases
Position: chrNHOQ01000340.1:1065-8002
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017982	PRP4	PF08799.11	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018154	-	1464	-	ENSGAFP00000017982	487 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012164	prpf4	70	71.471	ENSG00000136875	PRPF4	65	71.471	Homo_sapiens
ENSGAFG00000012164	prpf4	68	89.362	ENSAPOG00000014132	prpf4	87	89.362	Acanthochromis_polyacanthus
ENSGAFG00000012164	prpf4	70	71.176	ENSAMEG00000013048	PRPF4	63	71.176	Ailuropoda_melanoleuca
ENSGAFG00000012164	prpf4	68	88.450	ENSACIG00000005579	prpf4	85	88.450	Amphilophus_citrinellus
ENSGAFG00000012164	prpf4	68	90.274	ENSAOCG00000005457	prpf4	85	90.274	Amphiprion_ocellaris
ENSGAFG00000012164	prpf4	68	89.970	ENSAPEG00000000776	prpf4	85	89.970	Amphiprion_percula
ENSGAFG00000012164	prpf4	69	88.754	ENSATEG00000023013	prpf4	94	88.754	Anabas_testudineus
ENSGAFG00000012164	prpf4	67	73.006	ENSAPLG00000006534	PRPF4	60	73.006	Anas_platyrhynchos
ENSGAFG00000012164	prpf4	68	70.359	ENSACAG00000015110	PRPF4	63	70.359	Anolis_carolinensis
ENSGAFG00000012164	prpf4	70	71.176	ENSANAG00000022464	PRPF4	62	71.176	Aotus_nancymaae
ENSGAFG00000012164	prpf4	68	90.274	ENSACLG00000019031	prpf4	85	90.274	Astatotilapia_calliptera
ENSGAFG00000012164	prpf4	68	76.364	ENSAMXG00000006756	prpf4	91	76.364	Astyanax_mexicanus
ENSGAFG00000012164	prpf4	70	70.882	ENSBTAG00000004571	PRPF4	65	70.882	Bos_taurus
ENSGAFG00000012164	prpf4	60	40.476	WBGene00007972	prp-4	59	40.476	Caenorhabditis_elegans
ENSGAFG00000012164	prpf4	70	70.588	ENSCJAG00000017856	PRPF4	65	70.588	Callithrix_jacchus
ENSGAFG00000012164	prpf4	70	71.176	ENSCAFG00000003224	PRPF4	63	71.176	Canis_familiaris
ENSGAFG00000012164	prpf4	70	71.176	ENSCAFG00020022637	PRPF4	65	71.176	Canis_lupus_dingo
ENSGAFG00000012164	prpf4	70	70.588	ENSCHIG00000024648	-	65	70.588	Capra_hircus
ENSGAFG00000012164	prpf4	70	71.176	ENSTSYG00000010366	PRPF4	85	71.176	Carlito_syrichta
ENSGAFG00000012164	prpf4	56	68.015	ENSCAPG00000008935	PRPF4	65	66.429	Cavia_aperea
ENSGAFG00000012164	prpf4	70	71.176	ENSCPOG00000010747	-	65	71.176	Cavia_porcellus
ENSGAFG00000012164	prpf4	70	67.847	ENSCPOG00000014729	-	66	67.847	Cavia_porcellus
ENSGAFG00000012164	prpf4	70	70.882	ENSCCAG00000028990	PRPF4	65	70.882	Cebus_capucinus
ENSGAFG00000012164	prpf4	66	73.602	ENSCATG00000021552	PRPF4	65	71.176	Cercocebus_atys
ENSGAFG00000012164	prpf4	70	71.176	ENSCLAG00000013448	PRPF4	65	71.176	Chinchilla_lanigera
ENSGAFG00000012164	prpf4	56	73.063	ENSCHOG00000007233	PRPF4	60	73.063	Choloepus_hoffmanni
ENSGAFG00000012164	prpf4	68	71.386	ENSCPBG00000019136	PRPF4	51	71.386	Chrysemys_picta_bellii
ENSGAFG00000012164	prpf4	66	55.836	ENSCING00000001299	-	91	55.836	Ciona_intestinalis
ENSGAFG00000012164	prpf4	69	53.049	ENSCSAVG00000009178	-	89	54.448	Ciona_savignyi
ENSGAFG00000012164	prpf4	70	71.176	ENSCANG00000003246	PRPF4	65	71.176	Colobus_angolensis_palliatus
ENSGAFG00000012164	prpf4	70	71.176	ENSCGRG00001016992	Prpf4	67	71.176	Cricetulus_griseus_chok1gshd
ENSGAFG00000012164	prpf4	70	71.176	ENSCGRG00000017560	Prpf4	67	71.176	Cricetulus_griseus_crigri
ENSGAFG00000012164	prpf4	70	81.155	ENSCSEG00000020451	prpf4	94	81.155	Cynoglossus_semilaevis
ENSGAFG00000012164	prpf4	69	76.596	ENSDARG00000067639	prpf4	94	76.596	Danio_rerio
ENSGAFG00000012164	prpf4	70	70.882	ENSDNOG00000013203	PRPF4	65	70.882	Dasypus_novemcinctus
ENSGAFG00000012164	prpf4	70	71.471	ENSDORG00000026275	Prpf4	65	71.471	Dipodomys_ordii
ENSGAFG00000012164	prpf4	75	44.533	FBgn0036733	U4-U6-60K	94	45.161	Drosophila_melanogaster
ENSGAFG00000012164	prpf4	66	73.602	ENSETEG00000020389	PRPF4	61	73.602	Echinops_telfairi
ENSGAFG00000012164	prpf4	67	65.244	ENSEBUG00000015229	prpf4	65	66.159	Eptatretus_burgeri
ENSGAFG00000012164	prpf4	70	71.176	ENSEASG00005022678	PRPF4	65	71.176	Equus_asinus_asinus
ENSGAFG00000012164	prpf4	70	71.176	ENSECAG00000007072	PRPF4	65	71.176	Equus_caballus
ENSGAFG00000012164	prpf4	55	80.328	ENSEEUG00000007480	PRPF4	74	50.882	Erinaceus_europaeus
ENSGAFG00000012164	prpf4	69	75.380	ENSELUG00000007510	prpf4	94	75.380	Esox_lucius
ENSGAFG00000012164	prpf4	70	70.588	ENSFCAG00000005514	PRPF4	65	70.588	Felis_catus
ENSGAFG00000012164	prpf4	67	72.086	ENSFALG00000005423	PRPF4	63	72.086	Ficedula_albicollis
ENSGAFG00000012164	prpf4	70	71.176	ENSFDAG00000005839	PRPF4	65	71.176	Fukomys_damarensis
ENSGAFG00000012164	prpf4	69	90.274	ENSFHEG00000001300	prpf4	94	90.274	Fundulus_heteroclitus
ENSGAFG00000012164	prpf4	67	72.699	ENSGALG00000008857	PRPF4	60	72.699	Gallus_gallus
ENSGAFG00000012164	prpf4	71	73.653	ENSGACG00000015476	prpf4	94	73.795	Gasterosteus_aculeatus
ENSGAFG00000012164	prpf4	68	71.687	ENSGAGG00000025029	PRPF4	61	71.687	Gopherus_agassizii
ENSGAFG00000012164	prpf4	70	71.471	ENSGGOG00000006943	PRPF4	65	71.471	Gorilla_gorilla
ENSGAFG00000012164	prpf4	68	90.274	ENSHBUG00000000562	prpf4	96	90.274	Haplochromis_burtoni
ENSGAFG00000012164	prpf4	70	71.471	ENSHGLG00000015191	PRPF4	67	71.471	Heterocephalus_glaber_female
ENSGAFG00000012164	prpf4	63	65.584	ENSHGLG00000016628	-	63	66.234	Heterocephalus_glaber_female
ENSGAFG00000012164	prpf4	70	58.824	ENSHGLG00000003838	-	64	58.824	Heterocephalus_glaber_female
ENSGAFG00000012164	prpf4	70	58.824	ENSHGLG00100005571	-	64	58.824	Heterocephalus_glaber_male
ENSGAFG00000012164	prpf4	69	74.468	ENSIPUG00000017956	PRPF4	94	74.468	Ictalurus_punctatus
ENSGAFG00000012164	prpf4	70	71.176	ENSSTOG00000027833	PRPF4	67	71.176	Ictidomys_tridecemlineatus
ENSGAFG00000012164	prpf4	70	71.176	ENSJJAG00000008838	Prpf4	67	71.176	Jaculus_jaculus
ENSGAFG00000012164	prpf4	68	87.842	ENSKMAG00000013236	prpf4	85	87.842	Kryptolebias_marmoratus
ENSGAFG00000012164	prpf4	68	88.450	ENSLBEG00000020611	prpf4	94	88.450	Labrus_bergylta
ENSGAFG00000012164	prpf4	70	65.663	ENSLACG00000016317	PRPF4	86	65.663	Latimeria_chalumnae
ENSGAFG00000012164	prpf4	69	77.508	ENSLOCG00000000581	prpf4	94	77.508	Lepisosteus_oculatus
ENSGAFG00000012164	prpf4	70	70.882	ENSLAFG00000018225	PRPF4	65	70.882	Loxodonta_africana
ENSGAFG00000012164	prpf4	66	73.602	ENSMFAG00000039397	PRPF4	65	71.176	Macaca_fascicularis
ENSGAFG00000012164	prpf4	66	73.602	ENSMMUG00000005844	PRPF4	68	71.176	Macaca_mulatta
ENSGAFG00000012164	prpf4	66	60.559	ENSMNEG00000033737	PRPF4	62	58.824	Macaca_nemestrina
ENSGAFG00000012164	prpf4	66	73.602	ENSMLEG00000040284	PRPF4	65	71.176	Mandrillus_leucophaeus
ENSGAFG00000012164	prpf4	70	86.626	ENSMAMG00000020141	prpf4	94	86.626	Mastacembelus_armatus
ENSGAFG00000012164	prpf4	68	90.274	ENSMZEG00005023205	prpf4	85	90.274	Maylandia_zebra
ENSGAFG00000012164	prpf4	67	71.779	ENSMGAG00000001796	PRPF4	60	71.779	Meleagris_gallopavo
ENSGAFG00000012164	prpf4	66	73.602	ENSMAUG00000018022	Prpf4	65	71.176	Mesocricetus_auratus
ENSGAFG00000012164	prpf4	70	70.882	ENSMICG00000015022	PRPF4	65	70.882	Microcebus_murinus
ENSGAFG00000012164	prpf4	70	71.176	ENSMOCG00000018273	Prpf4	65	71.176	Microtus_ochrogaster
ENSGAFG00000012164	prpf4	69	85.410	ENSMMOG00000021177	prpf4	94	85.410	Mola_mola
ENSGAFG00000012164	prpf4	70	69.208	ENSMODG00000004444	-	65	69.208	Monodelphis_domestica
ENSGAFG00000012164	prpf4	70	68.915	ENSMODG00000025096	-	63	68.915	Monodelphis_domestica
ENSGAFG00000012164	prpf4	70	88.450	ENSMALG00000013624	prpf4	94	88.450	Monopterus_albus
ENSGAFG00000012164	prpf4	70	71.176	MGP_CAROLIEiJ_G0026078	Prpf4	65	71.176	Mus_caroli
ENSGAFG00000012164	prpf4	70	71.176	ENSMUSG00000066148	Prpf4	65	71.176	Mus_musculus
ENSGAFG00000012164	prpf4	70	71.471	MGP_PahariEiJ_G0028413	Prpf4	65	71.471	Mus_pahari
ENSGAFG00000012164	prpf4	70	71.176	MGP_SPRETEiJ_G0027042	Prpf4	65	71.176	Mus_spretus
ENSGAFG00000012164	prpf4	70	71.176	ENSMPUG00000007883	PRPF4	65	71.176	Mustela_putorius_furo
ENSGAFG00000012164	prpf4	70	70.588	ENSMLUG00000015309	-	63	70.588	Myotis_lucifugus
ENSGAFG00000012164	prpf4	69	70.326	ENSMLUG00000008626	-	60	72.671	Myotis_lucifugus
ENSGAFG00000012164	prpf4	70	64.387	ENSNGAG00000000468	Prpf4	77	62.953	Nannospalax_galili
ENSGAFG00000012164	prpf4	68	90.274	ENSNBRG00000007972	prpf4	85	90.274	Neolamprologus_brichardi
ENSGAFG00000012164	prpf4	70	71.176	ENSNLEG00000016647	PRPF4	65	71.176	Nomascus_leucogenys
ENSGAFG00000012164	prpf4	67	71.472	ENSMEUG00000013256	PRPF4	63	71.472	Notamacropus_eugenii
ENSGAFG00000012164	prpf4	70	70.588	ENSOPRG00000005302	PRPF4	65	70.588	Ochotona_princeps
ENSGAFG00000012164	prpf4	70	71.176	ENSODEG00000018147	PRPF4	65	71.176	Octodon_degus
ENSGAFG00000012164	prpf4	68	90.578	ENSONIG00000012671	prpf4	85	90.578	Oreochromis_niloticus
ENSGAFG00000012164	prpf4	70	71.471	ENSOCUG00000005046	PRPF4	65	71.471	Oryctolagus_cuniculus
ENSGAFG00000012164	prpf4	68	84.498	ENSORLG00000019641	prpf4	94	84.498	Oryzias_latipes
ENSGAFG00000012164	prpf4	70	84.498	ENSORLG00020019438	prpf4	94	84.498	Oryzias_latipes_hni
ENSGAFG00000012164	prpf4	68	85.410	ENSOMEG00000020941	prpf4	96	85.410	Oryzias_melastigma
ENSGAFG00000012164	prpf4	69	65.875	ENSOGAG00000007802	PRPF4	62	65.875	Otolemur_garnettii
ENSGAFG00000012164	prpf4	70	71.176	ENSOARG00000006319	PRPF4	63	71.176	Ovis_aries
ENSGAFG00000012164	prpf4	70	71.471	ENSPPAG00000041797	PRPF4	65	71.471	Pan_paniscus
ENSGAFG00000012164	prpf4	70	71.176	ENSPPRG00000014360	PRPF4	65	71.176	Panthera_pardus
ENSGAFG00000012164	prpf4	70	71.176	ENSPTIG00000009574	PRPF4	65	71.176	Panthera_tigris_altaica
ENSGAFG00000012164	prpf4	70	71.471	ENSPTRG00000021274	PRPF4	65	70.882	Pan_troglodytes
ENSGAFG00000012164	prpf4	66	73.602	ENSPANG00000025776	PRPF4	81	71.176	Papio_anubis
ENSGAFG00000012164	prpf4	69	77.812	ENSPKIG00000017259	prpf4	94	77.812	Paramormyrops_kingsleyae
ENSGAFG00000012164	prpf4	68	71.687	ENSPSIG00000010713	PRPF4	58	71.687	Pelodiscus_sinensis
ENSGAFG00000012164	prpf4	62	65.046	ENSPMGG00000000997	prpf4	63	66.565	Periophthalmus_magnuspinnatus
ENSGAFG00000012164	prpf4	70	71.176	ENSPEMG00000024115	Prpf4	65	71.176	Peromyscus_maniculatus_bairdii
ENSGAFG00000012164	prpf4	67	71.166	ENSPCIG00000003821	PRPF4	63	71.166	Phascolarctos_cinereus
ENSGAFG00000012164	prpf4	68	97.879	ENSPFOG00000013524	prpf4	100	97.879	Poecilia_formosa
ENSGAFG00000012164	prpf4	67	96.319	ENSPLAG00000011620	prpf4	100	93.333	Poecilia_latipinna
ENSGAFG00000012164	prpf4	68	98.176	ENSPMEG00000006813	prpf4	97	98.176	Poecilia_mexicana
ENSGAFG00000012164	prpf4	66	73.292	ENSPCAG00000002561	PRPF4	62	73.292	Procavia_capensis
ENSGAFG00000012164	prpf4	66	73.292	ENSPCOG00000011975	PRPF4	65	70.882	Propithecus_coquereli
ENSGAFG00000012164	prpf4	70	66.176	ENSPVAG00000004708	PRPF4	65	66.176	Pteropus_vampyrus
ENSGAFG00000012164	prpf4	68	90.578	ENSPNYG00000008013	prpf4	85	90.578	Pundamilia_nyererei
ENSGAFG00000012164	prpf4	69	74.695	ENSPNAG00000000697	prpf4	93	74.695	Pygocentrus_nattereri
ENSGAFG00000012164	prpf4	70	71.176	ENSRNOG00000014777	Prpf4	65	71.176	Rattus_norvegicus
ENSGAFG00000012164	prpf4	70	71.176	ENSRBIG00000040221	PRPF4	65	71.176	Rhinopithecus_bieti
ENSGAFG00000012164	prpf4	70	71.176	ENSRROG00000040240	PRPF4	65	71.176	Rhinopithecus_roxellana
ENSGAFG00000012164	prpf4	70	69.501	ENSSHAG00000017658	PRPF4	65	69.501	Sarcophilus_harrisii
ENSGAFG00000012164	prpf4	69	77.812	ENSSFOG00015008963	prpf4	88	77.812	Scleropages_formosus
ENSGAFG00000012164	prpf4	68	87.234	ENSSMAG00000008889	prpf4	85	87.234	Scophthalmus_maximus
ENSGAFG00000012164	prpf4	70	89.666	ENSSDUG00000022083	prpf4	90	89.666	Seriola_dumerili
ENSGAFG00000012164	prpf4	70	89.362	ENSSLDG00000008115	prpf4	90	89.362	Seriola_lalandi_dorsalis
ENSGAFG00000012164	prpf4	70	70.882	ENSSPUG00000015582	PRPF4	85	70.882	Sphenodon_punctatus
ENSGAFG00000012164	prpf4	68	80.547	ENSSPAG00000011286	prpf4	84	80.547	Stegastes_partitus
ENSGAFG00000012164	prpf4	70	71.176	ENSSSCG00000024648	PRPF4	65	71.176	Sus_scrofa
ENSGAFG00000012164	prpf4	64	74.194	ENSTGUG00000002623	PRPF4	63	74.194	Taeniopygia_guttata
ENSGAFG00000012164	prpf4	70	82.979	ENSTRUG00000008853	prpf4	94	82.979	Takifugu_rubripes
ENSGAFG00000012164	prpf4	70	83.587	ENSTNIG00000013250	prpf4	94	83.587	Tetraodon_nigroviridis
ENSGAFG00000012164	prpf4	70	59.706	ENSTBEG00000000821	PRPF4	85	59.706	Tupaia_belangeri
ENSGAFG00000012164	prpf4	56	76.384	ENSTTRG00000003246	PRPF4	60	76.384	Tursiops_truncatus
ENSGAFG00000012164	prpf4	69	69.461	ENSUAMG00000018288	PRPF4	88	72.492	Ursus_americanus
ENSGAFG00000012164	prpf4	70	70.294	ENSUMAG00000019375	PRPF4	65	70.294	Ursus_maritimus
ENSGAFG00000012164	prpf4	70	70.294	ENSVPAG00000005281	PRPF4	65	70.294	Vicugna_pacos
ENSGAFG00000012164	prpf4	70	70.058	ENSVVUG00000002476	PRPF4	64	72.393	Vulpes_vulpes
ENSGAFG00000012164	prpf4	68	98.480	ENSXMAG00000002750	prpf4	71	98.480	Xiphophorus_maculatus