EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012165 (Gene tree)
Gene ID: -
Gene Symbol: bicc1a
Alias: -
Full Name: BicC family RNA binding protein 1a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 60533 bases
Position: chrNHOQ01001229.1:15733515-15794047
Accession: ZDB-GENE-101223-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000017992	KH_1	PF00013.29	2.7e-34	1	2
ENSGAFP00000017992	KH_1	PF00013.29	2.7e-34	2	2
ENSGAFP00000017972	KH_1	PF00013.29	3.5e-34	1	2
ENSGAFP00000017972	KH_1	PF00013.29	3.5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018164	-	2724	-	ENSGAFP00000017992	907 (aa)	-	-
ENSGAFT00000018145	-	3331	-	ENSGAFP00000017972	946 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012165	bicc1a	62	54.922	ENSGAFG00000009167	bicc2	70	54.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012165	bicc1a	98	72.257	ENSG00000122870	BICC1	96	72.497	Homo_sapiens
ENSGAFG00000012165	bicc1a	98	94.099	ENSAPOG00000004667	bicc1a	96	94.313	Acanthochromis_polyacanthus
ENSGAFG00000012165	bicc1a	91	72.090	ENSAMEG00000013342	BICC1	95	72.348	Ailuropoda_melanoleuca
ENSGAFG00000012165	bicc1a	98	94.635	ENSAOCG00000022325	bicc1a	96	94.850	Amphiprion_ocellaris
ENSGAFG00000012165	bicc1a	98	94.528	ENSAPEG00000005966	bicc1a	96	94.742	Amphiprion_percula
ENSGAFG00000012165	bicc1a	98	92.842	ENSATEG00000008634	bicc1a	96	92.842	Anabas_testudineus
ENSGAFG00000012165	bicc1a	87	73.452	ENSAPLG00000015162	BICC1	95	73.722	Anas_platyrhynchos
ENSGAFG00000012165	bicc1a	96	72.026	ENSACAG00000001892	BICC1	83	72.240	Anolis_carolinensis
ENSGAFG00000012165	bicc1a	95	72.222	ENSANAG00000022803	BICC1	98	72.470	Aotus_nancymaae
ENSGAFG00000012165	bicc1a	98	92.589	ENSACLG00000019426	bicc1a	96	92.390	Astatotilapia_calliptera
ENSGAFG00000012165	bicc1a	90	61.463	ENSAMXG00000011396	bicc1a	95	60.488	Astyanax_mexicanus
ENSGAFG00000012165	bicc1a	98	79.215	ENSAMXG00000030961	bicc1b	96	79.555	Astyanax_mexicanus
ENSGAFG00000012165	bicc1a	98	72.756	ENSBTAG00000010694	BICC1	98	72.756	Bos_taurus
ENSGAFG00000012165	bicc1a	98	72.152	ENSCJAG00000010639	BICC1	89	72.392	Callithrix_jacchus
ENSGAFG00000012165	bicc1a	91	72.203	ENSCAFG00000012331	BICC1	98	72.460	Canis_familiaris
ENSGAFG00000012165	bicc1a	98	72.152	ENSCAFG00020026888	BICC1	98	72.392	Canis_lupus_dingo
ENSGAFG00000012165	bicc1a	98	72.650	ENSCHIG00000009725	BICC1	96	72.650	Capra_hircus
ENSGAFG00000012165	bicc1a	95	72.065	ENSTSYG00000004527	BICC1	93	72.609	Carlito_syrichta
ENSGAFG00000012165	bicc1a	78	74.485	ENSCAPG00000014361	BICC1	89	74.485	Cavia_aperea
ENSGAFG00000012165	bicc1a	91	72.222	ENSCPOG00000015585	BICC1	98	72.517	Cavia_porcellus
ENSGAFG00000012165	bicc1a	98	71.941	ENSCCAG00000028110	BICC1	96	72.181	Cebus_capucinus
ENSGAFG00000012165	bicc1a	98	72.152	ENSCATG00000016603	BICC1	98	72.392	Cercocebus_atys
ENSGAFG00000012165	bicc1a	91	70.942	ENSCLAG00000012171	BICC1	98	71.056	Chinchilla_lanigera
ENSGAFG00000012165	bicc1a	98	72.257	ENSCSAG00000007305	BICC1	96	72.497	Chlorocebus_sabaeus
ENSGAFG00000012165	bicc1a	86	85.714	ENSCHOG00000010828	BICC1	85	90.909	Choloepus_hoffmanni
ENSGAFG00000012165	bicc1a	98	73.890	ENSCPBG00000005820	BICC1	96	74.129	Chrysemys_picta_bellii
ENSGAFG00000012165	bicc1a	93	42.059	ENSCSAVG00000004820	-	100	43.534	Ciona_savignyi
ENSGAFG00000012165	bicc1a	93	72.818	ENSCANG00000037900	BICC1	95	73.068	Colobus_angolensis_palliatus
ENSGAFG00000012165	bicc1a	98	71.067	ENSCGRG00001019138	Bicc1	98	71.383	Cricetulus_griseus_chok1gshd
ENSGAFG00000012165	bicc1a	92	71.477	ENSCGRG00000005736	Bicc1	98	71.644	Cricetulus_griseus_crigri
ENSGAFG00000012165	bicc1a	98	92.357	ENSCSEG00000005038	bicc1a	96	92.463	Cynoglossus_semilaevis
ENSGAFG00000012165	bicc1a	98	96.459	ENSCVAG00000015896	bicc1a	96	96.459	Cyprinodon_variegatus
ENSGAFG00000012165	bicc1a	96	66.028	ENSDARG00000061682	bicc1a	94	65.957	Danio_rerio
ENSGAFG00000012165	bicc1a	89	72.917	ENSDNOG00000009338	BICC1	95	73.001	Dasypus_novemcinctus
ENSGAFG00000012165	bicc1a	98	71.595	ENSDORG00000011450	Bicc1	98	71.835	Dipodomys_ordii
ENSGAFG00000012165	bicc1a	98	62.040	ENSETEG00000010754	BICC1	96	62.566	Echinops_telfairi
ENSGAFG00000012165	bicc1a	78	45.330	ENSEBUG00000016015	-	93	43.995	Eptatretus_burgeri
ENSGAFG00000012165	bicc1a	98	71.835	ENSEASG00005013784	BICC1	98	72.076	Equus_asinus_asinus
ENSGAFG00000012165	bicc1a	98	71.835	ENSECAG00000013979	BICC1	95	70.124	Equus_caballus
ENSGAFG00000012165	bicc1a	83	85.271	ENSEEUG00000001269	BICC1	95	53.959	Erinaceus_europaeus
ENSGAFG00000012165	bicc1a	99	84.839	ENSELUG00000005613	bicc1a	96	85.638	Esox_lucius
ENSGAFG00000012165	bicc1a	98	71.730	ENSFCAG00000006211	BICC1	89	71.970	Felis_catus
ENSGAFG00000012165	bicc1a	89	70.787	ENSFALG00000002247	BICC1	95	70.787	Ficedula_albicollis
ENSGAFG00000012165	bicc1a	91	71.818	ENSFDAG00000016201	BICC1	98	72.139	Fukomys_damarensis
ENSGAFG00000012165	bicc1a	97	90.098	ENSFHEG00000022447	bicc1a	95	90.098	Fundulus_heteroclitus
ENSGAFG00000012165	bicc1a	98	81.751	ENSGMOG00000018749	bicc1a	95	82.222	Gadus_morhua
ENSGAFG00000012165	bicc1a	98	73.918	ENSGALG00000036095	BICC1	94	73.750	Gallus_gallus
ENSGAFG00000012165	bicc1a	98	85.835	ENSGACG00000010043	bicc1a	96	85.714	Gasterosteus_aculeatus
ENSGAFG00000012165	bicc1a	93	70.889	ENSGAGG00000012189	BICC1	99	73.007	Gopherus_agassizii
ENSGAFG00000012165	bicc1a	98	72.257	ENSGGOG00000005484	BICC1	96	72.497	Gorilla_gorilla
ENSGAFG00000012165	bicc1a	98	92.589	ENSHBUG00000016079	bicc1a	96	92.390	Haplochromis_burtoni
ENSGAFG00000012165	bicc1a	98	71.700	ENSHGLG00000005632	-	98	71.941	Heterocephalus_glaber_female
ENSGAFG00000012165	bicc1a	98	71.700	ENSHGLG00100015631	-	98	71.941	Heterocephalus_glaber_male
ENSGAFG00000012165	bicc1a	98	90.919	ENSHCOG00000017407	bicc1a	96	90.812	Hippocampus_comes
ENSGAFG00000012165	bicc1a	98	76.514	ENSIPUG00000008467	bicc1	96	76.452	Ictalurus_punctatus
ENSGAFG00000012165	bicc1a	94	72.113	ENSSTOG00000000168	BICC1	98	72.410	Ictidomys_tridecemlineatus
ENSGAFG00000012165	bicc1a	96	72.103	ENSJJAG00000015090	Bicc1	98	72.210	Jaculus_jaculus
ENSGAFG00000012165	bicc1a	98	93.441	ENSKMAG00000000780	bicc1a	96	93.240	Kryptolebias_marmoratus
ENSGAFG00000012165	bicc1a	98	93.483	ENSLBEG00000021160	bicc1a	96	93.483	Labrus_bergylta
ENSGAFG00000012165	bicc1a	87	72.137	ENSLACG00000010091	BICC1	95	72.308	Latimeria_chalumnae
ENSGAFG00000012165	bicc1a	98	79.512	ENSLOCG00000006500	bicc1a	96	79.724	Lepisosteus_oculatus
ENSGAFG00000012165	bicc1a	87	71.530	ENSLAFG00000007749	BICC1	95	71.801	Loxodonta_africana
ENSGAFG00000012165	bicc1a	98	72.363	ENSMFAG00000036177	BICC1	98	72.603	Macaca_fascicularis
ENSGAFG00000012165	bicc1a	98	72.363	ENSMMUG00000015750	BICC1	98	72.603	Macaca_mulatta
ENSGAFG00000012165	bicc1a	98	72.363	ENSMNEG00000009601	BICC1	98	72.603	Macaca_nemestrina
ENSGAFG00000012165	bicc1a	97	72.524	ENSMLEG00000040006	BICC1	95	72.766	Mandrillus_leucophaeus
ENSGAFG00000012165	bicc1a	98	93.056	ENSMAMG00000016363	bicc1a	96	93.056	Mastacembelus_armatus
ENSGAFG00000012165	bicc1a	98	92.589	ENSMZEG00005027431	bicc1a	96	92.390	Maylandia_zebra
ENSGAFG00000012165	bicc1a	87	70.000	ENSMGAG00000002729	BICC1	95	70.273	Meleagris_gallopavo
ENSGAFG00000012165	bicc1a	98	70.855	ENSMAUG00000018772	Bicc1	98	71.172	Mesocricetus_auratus
ENSGAFG00000012165	bicc1a	98	72.304	ENSMICG00000002045	BICC1	98	72.545	Microcebus_murinus
ENSGAFG00000012165	bicc1a	98	70.855	ENSMOCG00000020143	Bicc1	98	71.067	Microtus_ochrogaster
ENSGAFG00000012165	bicc1a	98	88.166	ENSMMOG00000008063	bicc1a	96	88.166	Mola_mola
ENSGAFG00000012165	bicc1a	98	71.593	ENSMODG00000016125	BICC1	86	72.135	Monodelphis_domestica
ENSGAFG00000012165	bicc1a	98	91.453	ENSMALG00000019124	bicc1a	99	91.258	Monopterus_albus
ENSGAFG00000012165	bicc1a	98	70.464	MGP_CAROLIEiJ_G0015426	Bicc1	98	71.363	Mus_caroli
ENSGAFG00000012165	bicc1a	98	70.495	ENSMUSG00000014329	Bicc1	98	71.329	Mus_musculus
ENSGAFG00000012165	bicc1a	98	71.233	MGP_PahariEiJ_G0030842	Bicc1	98	71.789	Mus_pahari
ENSGAFG00000012165	bicc1a	98	70.781	MGP_SPRETEiJ_G0016239	Bicc1	98	71.561	Mus_spretus
ENSGAFG00000012165	bicc1a	84	61.725	ENSMPUG00000010431	BICC1	95	62.015	Mustela_putorius_furo
ENSGAFG00000012165	bicc1a	88	70.780	ENSMLUG00000005170	BICC1	95	71.047	Myotis_lucifugus
ENSGAFG00000012165	bicc1a	98	70.947	ENSNGAG00000023605	Bicc1	98	71.504	Nannospalax_galili
ENSGAFG00000012165	bicc1a	98	92.680	ENSNBRG00000015387	bicc1a	96	92.680	Neolamprologus_brichardi
ENSGAFG00000012165	bicc1a	98	72.152	ENSNLEG00000012284	BICC1	96	72.392	Nomascus_leucogenys
ENSGAFG00000012165	bicc1a	79	81.562	ENSMEUG00000005472	BICC1	92	82.067	Notamacropus_eugenii
ENSGAFG00000012165	bicc1a	91	65.873	ENSOPRG00000009804	-	95	66.440	Ochotona_princeps
ENSGAFG00000012165	bicc1a	98	70.483	ENSODEG00000000545	BICC1	98	70.724	Octodon_degus
ENSGAFG00000012165	bicc1a	98	93.233	ENSONIG00000000620	bicc1a	96	93.233	Oreochromis_niloticus
ENSGAFG00000012165	bicc1a	75	81.250	ENSOANG00000013223	BICC1	87	80.714	Ornithorhynchus_anatinus
ENSGAFG00000012165	bicc1a	98	71.595	ENSOCUG00000013696	BICC1	98	71.835	Oryctolagus_cuniculus
ENSGAFG00000012165	bicc1a	98	90.870	ENSORLG00000005313	bicc1a	96	91.085	Oryzias_latipes
ENSGAFG00000012165	bicc1a	98	90.870	ENSORLG00020010305	bicc1a	96	91.085	Oryzias_latipes_hni
ENSGAFG00000012165	bicc1a	98	90.763	ENSORLG00015015393	bicc1a	96	90.977	Oryzias_latipes_hsok
ENSGAFG00000012165	bicc1a	98	91.622	ENSOMEG00000009659	bicc1a	96	91.622	Oryzias_melastigma
ENSGAFG00000012165	bicc1a	98	71.882	ENSOGAG00000000304	BICC1	96	72.122	Otolemur_garnettii
ENSGAFG00000012165	bicc1a	98	72.545	ENSOARG00000004086	BICC1	96	72.545	Ovis_aries
ENSGAFG00000012165	bicc1a	96	72.659	ENSPPAG00000035110	BICC1	95	72.903	Pan_paniscus
ENSGAFG00000012165	bicc1a	98	71.730	ENSPPRG00000023988	BICC1	96	71.970	Panthera_pardus
ENSGAFG00000012165	bicc1a	96	72.133	ENSPTIG00000006974	BICC1	95	72.377	Panthera_tigris_altaica
ENSGAFG00000012165	bicc1a	98	72.257	ENSPTRG00000002520	BICC1	92	72.675	Pan_troglodytes
ENSGAFG00000012165	bicc1a	91	71.348	ENSPANG00000022024	BICC1	90	71.606	Papio_anubis
ENSGAFG00000012165	bicc1a	98	79.809	ENSPKIG00000025290	bicc1b	96	79.809	Paramormyrops_kingsleyae
ENSGAFG00000012165	bicc1a	89	72.190	ENSPSIG00000009802	BICC1	95	72.454	Pelodiscus_sinensis
ENSGAFG00000012165	bicc1a	93	81.930	ENSPMGG00000004168	bicc1a	95	81.930	Periophthalmus_magnuspinnatus
ENSGAFG00000012165	bicc1a	96	71.781	ENSPEMG00000014055	Bicc1	98	71.996	Peromyscus_maniculatus_bairdii
ENSGAFG00000012165	bicc1a	87	58.537	ENSPMAG00000005468	-	96	53.556	Petromyzon_marinus
ENSGAFG00000012165	bicc1a	98	72.794	ENSPCIG00000028868	BICC1	98	73.033	Phascolarctos_cinereus
ENSGAFG00000012165	bicc1a	98	98.601	ENSPFOG00000018348	bicc1a	96	98.601	Poecilia_formosa
ENSGAFG00000012165	bicc1a	98	97.632	ENSPLAG00000010377	bicc1a	96	97.632	Poecilia_latipinna
ENSGAFG00000012165	bicc1a	98	98.601	ENSPMEG00000020413	bicc1a	96	98.601	Poecilia_mexicana
ENSGAFG00000012165	bicc1a	98	92.455	ENSPREG00000010793	bicc1a	91	98.659	Poecilia_reticulata
ENSGAFG00000012165	bicc1a	91	72.122	ENSPPYG00000002429	BICC1	95	72.379	Pongo_abelii
ENSGAFG00000012165	bicc1a	95	78.964	ENSPCAG00000007197	BICC1	89	79.677	Procavia_capensis
ENSGAFG00000012165	bicc1a	98	72.093	ENSPCOG00000028597	BICC1	96	72.334	Propithecus_coquereli
ENSGAFG00000012165	bicc1a	98	67.511	ENSPVAG00000008004	BICC1	96	67.756	Pteropus_vampyrus
ENSGAFG00000012165	bicc1a	98	92.390	ENSPNYG00000002818	bicc1a	96	92.390	Pundamilia_nyererei
ENSGAFG00000012165	bicc1a	95	59.834	ENSPNAG00000026738	bicc1a	100	59.814	Pygocentrus_nattereri
ENSGAFG00000012165	bicc1a	98	79.321	ENSPNAG00000019026	bicc1b	96	79.406	Pygocentrus_nattereri
ENSGAFG00000012165	bicc1a	89	70.751	ENSRNOG00000000614	Bicc1	98	71.247	Rattus_norvegicus
ENSGAFG00000012165	bicc1a	91	68.911	ENSRBIG00000030483	BICC1	92	69.170	Rhinopithecus_bieti
ENSGAFG00000012165	bicc1a	91	72.531	ENSRROG00000017888	BICC1	98	72.864	Rhinopithecus_roxellana
ENSGAFG00000012165	bicc1a	98	72.257	ENSSBOG00000029991	BICC1	98	72.601	Saimiri_boliviensis_boliviensis
ENSGAFG00000012165	bicc1a	98	72.211	ENSSHAG00000011416	BICC1	98	72.450	Sarcophilus_harrisii
ENSGAFG00000012165	bicc1a	98	71.642	ENSSFOG00015008406	BICC1	96	72.476	Scleropages_formosus
ENSGAFG00000012165	bicc1a	98	91.880	ENSSMAG00000017028	bicc1a	96	91.880	Scophthalmus_maximus
ENSGAFG00000012165	bicc1a	98	93.697	ENSSDUG00000017080	bicc1a	96	93.697	Seriola_dumerili
ENSGAFG00000012165	bicc1a	98	91.560	ENSSLDG00000015619	bicc1a	95	93.435	Seriola_lalandi_dorsalis
ENSGAFG00000012165	bicc1a	91	71.202	ENSSARG00000011303	BICC1	95	71.687	Sorex_araneus
ENSGAFG00000012165	bicc1a	98	94.850	ENSSPAG00000015300	bicc1a	96	94.850	Stegastes_partitus
ENSGAFG00000012165	bicc1a	98	71.760	ENSSSCG00000010204	BICC1	98	72.122	Sus_scrofa
ENSGAFG00000012165	bicc1a	91	73.068	ENSTGUG00000005584	BICC1	95	73.326	Taeniopygia_guttata
ENSGAFG00000012165	bicc1a	98	89.103	ENSTRUG00000008560	bicc1a	96	88.913	Takifugu_rubripes
ENSGAFG00000012165	bicc1a	93	84.624	ENSTNIG00000017029	-	95	84.624	Tetraodon_nigroviridis
ENSGAFG00000012165	bicc1a	98	86.111	ENSTNIG00000019377	bicc1a	96	86.111	Tetraodon_nigroviridis
ENSGAFG00000012165	bicc1a	59	81.081	ENSTBEG00000012202	BICC1	63	84.091	Tupaia_belangeri
ENSGAFG00000012165	bicc1a	91	70.148	ENSTTRG00000017309	BICC1	95	70.862	Tursiops_truncatus
ENSGAFG00000012165	bicc1a	94	72.088	ENSUMAG00000006522	BICC1	91	72.338	Ursus_maritimus
ENSGAFG00000012165	bicc1a	62	82.946	ENSVPAG00000008214	BICC1	68	77.833	Vicugna_pacos
ENSGAFG00000012165	bicc1a	98	72.152	ENSVVUG00000008341	BICC1	96	72.392	Vulpes_vulpes
ENSGAFG00000012165	bicc1a	76	63.722	ENSXETG00000005117	bicc1	99	64.926	Xenopus_tropicalis
ENSGAFG00000012165	bicc1a	98	98.278	ENSXMAG00000007368	bicc1a	96	98.278	Xiphophorus_maculatus