EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012331 (Gene tree)
Gene ID: -
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4447 bases
Position: chrNHOQ01001816.1:2497597-2502043
Accession: ZDB-GENE-030131-8898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018229	Methyltransf_8	PF05148.15	2.9e-65	1	1
ENSGAFP00000018226	Methyltransf_8	PF05148.15	1.1e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018400	-	1902	-	ENSGAFP00000018226	478 (aa)	-	-
ENSGAFT00000018403	-	1359	-	ENSGAFP00000018229	452 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012331	rrp8	99	55.936	ENSAPOG00000010806	rrp8	86	55.936	Acanthochromis_polyacanthus
ENSGAFG00000012331	rrp8	99	55.936	ENSAPOG00000010798	-	86	55.936	Acanthochromis_polyacanthus
ENSGAFG00000012331	rrp8	99	55.936	ENSAPOG00000008509	-	88	55.936	Acanthochromis_polyacanthus
ENSGAFG00000012331	rrp8	92	52.941	ENSACIG00000019896	rrp8	85	53.499	Amphilophus_citrinellus
ENSGAFG00000012331	rrp8	99	56.024	ENSAOCG00000008785	rrp8	88	56.024	Amphiprion_ocellaris
ENSGAFG00000012331	rrp8	99	55.823	ENSAPEG00000008416	rrp8	88	55.823	Amphiprion_percula
ENSGAFG00000012331	rrp8	99	52.906	ENSATEG00000014110	rrp8	92	53.908	Anabas_testudineus
ENSGAFG00000012331	rrp8	50	48.988	ENSANAG00000028524	RRP8	52	48.988	Aotus_nancymaae
ENSGAFG00000012331	rrp8	100	53.265	ENSACLG00000002746	rrp8	87	53.265	Astatotilapia_calliptera
ENSGAFG00000012331	rrp8	99	42.062	ENSAMXG00000005164	rrp8	86	42.008	Astyanax_mexicanus
ENSGAFG00000012331	rrp8	50	49.798	ENSCJAG00000014012	RRP8	74	44.762	Callithrix_jacchus
ENSGAFG00000012331	rrp8	50	48.178	ENSTSYG00000003391	RRP8	74	43.810	Carlito_syrichta
ENSGAFG00000012331	rrp8	50	50.202	ENSCCAG00000035197	RRP8	73	44.231	Cebus_capucinus
ENSGAFG00000012331	rrp8	50	49.393	ENSCATG00000029344	RRP8	74	43.810	Cercocebus_atys
ENSGAFG00000012331	rrp8	50	48.988	ENSCSAG00000004345	RRP8	52	48.988	Chlorocebus_sabaeus
ENSGAFG00000012331	rrp8	71	35.202	ENSCING00000003281	-	91	35.202	Ciona_intestinalis
ENSGAFG00000012331	rrp8	73	40.785	ENSCSAVG00000006435	-	72	40.785	Ciona_savignyi
ENSGAFG00000012331	rrp8	50	49.393	ENSCANG00000040771	RRP8	74	42.857	Colobus_angolensis_palliatus
ENSGAFG00000012331	rrp8	71	57.143	ENSCSEG00000007330	rrp8	83	57.585	Cynoglossus_semilaevis
ENSGAFG00000012331	rrp8	100	64.671	ENSCVAG00000012032	rrp8	88	65.269	Cyprinodon_variegatus
ENSGAFG00000012331	rrp8	99	42.191	ENSDARG00000071652	rrp8	87	43.611	Danio_rerio
ENSGAFG00000012331	rrp8	99	41.288	ENSELUG00000008665	rrp8	88	41.288	Esox_lucius
ENSGAFG00000012331	rrp8	80	53.039	ENSGACG00000011343	rrp8	84	53.039	Gasterosteus_aculeatus
ENSGAFG00000012331	rrp8	100	53.878	ENSHBUG00000017131	rrp8	87	53.878	Haplochromis_burtoni
ENSGAFG00000012331	rrp8	99	47.023	ENSHCOG00000001293	rrp8	86	48.460	Hippocampus_comes
ENSGAFG00000012331	rrp8	99	40.891	ENSIPUG00000017733	rrp8	87	41.870	Ictalurus_punctatus
ENSGAFG00000012331	rrp8	68	40.171	ENSJJAG00000020608	-	76	40.171	Jaculus_jaculus
ENSGAFG00000012331	rrp8	99	59.798	ENSKMAG00000009229	rrp8	87	60.202	Kryptolebias_marmoratus
ENSGAFG00000012331	rrp8	69	58.255	ENSLBEG00000019937	rrp8	83	58.610	Labrus_bergylta
ENSGAFG00000012331	rrp8	52	51.020	ENSLACG00000001252	-	82	44.543	Latimeria_chalumnae
ENSGAFG00000012331	rrp8	99	41.300	ENSLOCG00000009591	rrp8	86	41.300	Lepisosteus_oculatus
ENSGAFG00000012331	rrp8	50	49.798	ENSMFAG00000046084	RRP8	74	43.810	Macaca_fascicularis
ENSGAFG00000012331	rrp8	50	49.798	ENSMMUG00000007738	RRP8	74	43.810	Macaca_mulatta
ENSGAFG00000012331	rrp8	50	49.393	ENSMNEG00000029648	RRP8	74	43.810	Macaca_nemestrina
ENSGAFG00000012331	rrp8	50	49.393	ENSMLEG00000035110	RRP8	74	43.810	Mandrillus_leucophaeus
ENSGAFG00000012331	rrp8	99	55.731	ENSMAMG00000009679	rrp8	88	55.357	Mastacembelus_armatus
ENSGAFG00000012331	rrp8	100	53.061	ENSMZEG00005008926	rrp8	87	53.061	Maylandia_zebra
ENSGAFG00000012331	rrp8	92	54.486	ENSMMOG00000015709	rrp8	86	53.509	Mola_mola
ENSGAFG00000012331	rrp8	99	53.770	ENSMALG00000015984	rrp8	88	53.968	Monopterus_albus
ENSGAFG00000012331	rrp8	77	45.230	ENSMLUG00000008938	RRP8	79	39.286	Myotis_lucifugus
ENSGAFG00000012331	rrp8	75	55.143	ENSNBRG00000023416	rrp8	82	55.143	Neolamprologus_brichardi
ENSGAFG00000012331	rrp8	84	50.365	ENSONIG00000016861	rrp8	96	51.816	Oreochromis_niloticus
ENSGAFG00000012331	rrp8	50	49.799	ENSOCUG00000027619	RRP8	54	49.799	Oryctolagus_cuniculus
ENSGAFG00000012331	rrp8	99	54.379	ENSORLG00000004175	rrp8	86	54.582	Oryzias_latipes
ENSGAFG00000012331	rrp8	99	54.490	ENSORLG00020011413	rrp8	86	54.694	Oryzias_latipes_hni
ENSGAFG00000012331	rrp8	99	54.418	ENSORLG00015015410	rrp8	86	54.618	Oryzias_latipes_hsok
ENSGAFG00000012331	rrp8	99	52.834	ENSOMEG00000003161	rrp8	87	53.239	Oryzias_melastigma
ENSGAFG00000012331	rrp8	50	48.988	ENSPANG00000006537	RRP8	74	43.810	Papio_anubis
ENSGAFG00000012331	rrp8	99	42.063	ENSPKIG00000024217	rrp8	88	42.376	Paramormyrops_kingsleyae
ENSGAFG00000012331	rrp8	100	89.167	ENSPFOG00000007308	rrp8	87	89.167	Poecilia_formosa
ENSGAFG00000012331	rrp8	100	89.167	ENSPLAG00000011349	rrp8	87	89.167	Poecilia_latipinna
ENSGAFG00000012331	rrp8	100	88.125	ENSPMEG00000009888	rrp8	87	88.125	Poecilia_mexicana
ENSGAFG00000012331	rrp8	100	87.010	ENSPREG00000008450	rrp8	100	88.041	Poecilia_reticulata
ENSGAFG00000012331	rrp8	57	48.062	ENSPCAG00000016176	RRP8	56	47.529	Procavia_capensis
ENSGAFG00000012331	rrp8	57	45.070	ENSPCOG00000024627	RRP8	61	45.390	Propithecus_coquereli
ENSGAFG00000012331	rrp8	50	48.387	ENSPVAG00000002420	RRP8	53	48.387	Pteropus_vampyrus
ENSGAFG00000012331	rrp8	100	53.512	ENSPNYG00000002878	rrp8	87	53.512	Pundamilia_nyererei
ENSGAFG00000012331	rrp8	99	41.955	ENSPNAG00000024779	rrp8	86	42.363	Pygocentrus_nattereri
ENSGAFG00000012331	rrp8	50	50.202	ENSRBIG00000044485	RRP8	74	44.762	Rhinopithecus_bieti
ENSGAFG00000012331	rrp8	50	50.202	ENSRROG00000045322	RRP8	74	44.762	Rhinopithecus_roxellana
ENSGAFG00000012331	rrp8	51	33.829	YDR083W	-	63	33.829	Saccharomyces_cerevisiae
ENSGAFG00000012331	rrp8	50	48.988	ENSSBOG00000035280	RRP8	52	48.988	Saimiri_boliviensis_boliviensis
ENSGAFG00000012331	rrp8	99	41.468	ENSSFOG00015003917	rrp8	87	41.683	Scleropages_formosus
ENSGAFG00000012331	rrp8	100	55.397	ENSSMAG00000004859	rrp8	87	55.397	Scophthalmus_maximus
ENSGAFG00000012331	rrp8	99	56.213	ENSSDUG00000010477	rrp8	88	55.819	Seriola_dumerili
ENSGAFG00000012331	rrp8	99	55.711	ENSSLDG00000000521	rrp8	87	54.890	Seriola_lalandi_dorsalis
ENSGAFG00000012331	rrp8	69	61.043	ENSSPAG00000006664	rrp8	83	61.310	Stegastes_partitus
ENSGAFG00000012331	rrp8	99	49.493	ENSTRUG00000021812	rrp8	87	49.696	Takifugu_rubripes
ENSGAFG00000012331	rrp8	71	90.625	ENSXCOG00000006156	rrp8	83	90.625	Xiphophorus_couchianus
ENSGAFG00000012331	rrp8	100	91.441	ENSXMAG00000005011	rrp8	87	91.667	Xiphophorus_maculatus