EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012527 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 17763 bases
Position: chrNHOQ01001971.1:12001175-12018937
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018559	GTP_EFTU	PF00009.27	5.5e-63	1	1
ENSGAFP00000018559	GTP_EFTU_D2	PF03144.25	2.2e-17	1	1
ENSGAFP00000018559	EFG_IV	PF03764.18	1.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018737	-	4715	-	ENSGAFP00000018559	748 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012527	gfm1	92	34.324	ENSGAFG00000000439	gfm2	92	34.730
ENSGAFG00000012527	gfm1	75	38.926	ENSGAFG00000002633	-	74	38.926
ENSGAFG00000012527	gfm1	53	35.294	ENSGAFG00000016068	guf1	67	35.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012527	gfm1	98	81.224	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSGAFG00000012527	gfm1	93	88.968	ENSAPOG00000016489	gfm1	99	88.968	Acanthochromis_polyacanthus
ENSGAFG00000012527	gfm1	96	82.730	ENSAMEG00000013542	GFM1	95	82.730	Ailuropoda_melanoleuca
ENSGAFG00000012527	gfm1	97	86.345	ENSACIG00000014465	gfm1	94	86.345	Amphilophus_citrinellus
ENSGAFG00000012527	gfm1	100	89.840	ENSAOCG00000006023	gfm1	100	89.840	Amphiprion_ocellaris
ENSGAFG00000012527	gfm1	100	89.706	ENSAPEG00000024499	gfm1	100	89.706	Amphiprion_percula
ENSGAFG00000012527	gfm1	100	90.508	ENSATEG00000013789	gfm1	100	90.508	Anabas_testudineus
ENSGAFG00000012527	gfm1	97	79.724	ENSAPLG00000005022	GFM1	100	79.724	Anas_platyrhynchos
ENSGAFG00000012527	gfm1	97	81.241	ENSACAG00000006829	GFM1	98	81.241	Anolis_carolinensis
ENSGAFG00000012527	gfm1	100	79.228	ENSANAG00000035983	GFM1	100	79.228	Aotus_nancymaae
ENSGAFG00000012527	gfm1	100	90.642	ENSACLG00000016586	gfm1	100	90.642	Astatotilapia_calliptera
ENSGAFG00000012527	gfm1	100	86.765	ENSAMXG00000013435	gfm1	98	87.825	Astyanax_mexicanus
ENSGAFG00000012527	gfm1	96	82.033	ENSBTAG00000027795	GFM1	95	82.033	Bos_taurus
ENSGAFG00000012527	gfm1	94	57.061	WBGene00009246	gfm-1	95	56.742	Caenorhabditis_elegans
ENSGAFG00000012527	gfm1	97	81.680	ENSCJAG00000000363	GFM1	97	81.680	Callithrix_jacchus
ENSGAFG00000012527	gfm1	98	81.335	ENSCAFG00000009006	GFM1	100	82.101	Canis_familiaris
ENSGAFG00000012527	gfm1	98	81.224	ENSCAFG00020005878	GFM1	98	82.730	Canis_lupus_dingo
ENSGAFG00000012527	gfm1	96	82.173	ENSCHIG00000015220	GFM1	95	82.173	Capra_hircus
ENSGAFG00000012527	gfm1	100	79.416	ENSTSYG00000002013	GFM1	100	79.416	Carlito_syrichta
ENSGAFG00000012527	gfm1	96	71.961	ENSCAPG00000005699	GFM1	97	71.961	Cavia_aperea
ENSGAFG00000012527	gfm1	97	81.680	ENSCPOG00000001194	GFM1	96	81.680	Cavia_porcellus
ENSGAFG00000012527	gfm1	100	79.494	ENSCCAG00000025561	GFM1	100	79.494	Cebus_capucinus
ENSGAFG00000012527	gfm1	100	79.627	ENSCATG00000037622	GFM1	100	79.627	Cercocebus_atys
ENSGAFG00000012527	gfm1	97	81.129	ENSCLAG00000002503	GFM1	96	81.129	Chinchilla_lanigera
ENSGAFG00000012527	gfm1	100	79.627	ENSCSAG00000012162	GFM1	100	79.627	Chlorocebus_sabaeus
ENSGAFG00000012527	gfm1	100	70.822	ENSCHOG00000004867	GFM1	100	70.822	Choloepus_hoffmanni
ENSGAFG00000012527	gfm1	100	80.374	ENSCPBG00000018367	GFM1	99	80.374	Chrysemys_picta_bellii
ENSGAFG00000012527	gfm1	94	58.741	ENSCING00000011960	-	93	58.741	Ciona_intestinalis
ENSGAFG00000012527	gfm1	95	59.583	ENSCSAVG00000008514	-	99	59.687	Ciona_savignyi
ENSGAFG00000012527	gfm1	98	80.952	ENSCANG00000031714	GFM1	100	79.760	Colobus_angolensis_palliatus
ENSGAFG00000012527	gfm1	100	79.627	ENSCGRG00001022095	GFM1	100	79.627	Cricetulus_griseus_chok1gshd
ENSGAFG00000012527	gfm1	100	79.627	ENSCGRG00000012043	GFM1	100	79.627	Cricetulus_griseus_crigri
ENSGAFG00000012527	gfm1	97	83.126	ENSCSEG00000017088	gfm1	99	83.126	Cynoglossus_semilaevis
ENSGAFG00000012527	gfm1	100	94.519	ENSCVAG00000004126	gfm1	100	94.519	Cyprinodon_variegatus
ENSGAFG00000012527	gfm1	100	83.824	ENSDARG00000063624	gfm1	100	83.824	Danio_rerio
ENSGAFG00000012527	gfm1	55	79.707	ENSDNOG00000016385	-	100	79.707	Dasypus_novemcinctus
ENSGAFG00000012527	gfm1	100	78.220	ENSDORG00000014165	Gfm1	100	78.220	Dipodomys_ordii
ENSGAFG00000012527	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSGAFG00000012527	gfm1	96	73.786	ENSETEG00000019197	GFM1	95	73.786	Echinops_telfairi
ENSGAFG00000012527	gfm1	90	62.519	ENSEBUG00000012794	gfm1	99	62.519	Eptatretus_burgeri
ENSGAFG00000012527	gfm1	96	60.833	ENSEEUG00000000429	GFM1	99	60.833	Erinaceus_europaeus
ENSGAFG00000012527	gfm1	100	85.027	ENSELUG00000014728	gfm1	100	85.027	Esox_lucius
ENSGAFG00000012527	gfm1	97	81.680	ENSFCAG00000013291	GFM1	100	79.841	Felis_catus
ENSGAFG00000012527	gfm1	90	80.000	ENSFALG00000007619	GFM1	100	80.000	Ficedula_albicollis
ENSGAFG00000012527	gfm1	98	80.245	ENSFDAG00000016559	GFM1	97	80.245	Fukomys_damarensis
ENSGAFG00000012527	gfm1	100	94.920	ENSFHEG00000006091	gfm1	100	94.920	Fundulus_heteroclitus
ENSGAFG00000012527	gfm1	97	86.933	ENSGMOG00000010161	gfm1	100	86.933	Gadus_morhua
ENSGAFG00000012527	gfm1	97	80.138	ENSGALG00000009634	GFM1	98	80.138	Gallus_gallus
ENSGAFG00000012527	gfm1	99	89.973	ENSGACG00000009864	gfm1	99	89.973	Gasterosteus_aculeatus
ENSGAFG00000012527	gfm1	98	81.224	ENSGGOG00000003085	GFM1	100	80.027	Gorilla_gorilla
ENSGAFG00000012527	gfm1	100	90.775	ENSHBUG00000002120	gfm1	100	90.775	Haplochromis_burtoni
ENSGAFG00000012527	gfm1	97	80.716	ENSHGLG00000016855	GFM1	96	80.716	Heterocephalus_glaber_female
ENSGAFG00000012527	gfm1	97	80.716	ENSHGLG00100013049	GFM1	96	80.716	Heterocephalus_glaber_male
ENSGAFG00000012527	gfm1	100	88.770	ENSHCOG00000007638	gfm1	100	88.770	Hippocampus_comes
ENSGAFG00000012527	gfm1	100	86.631	ENSIPUG00000005873	gfm1	100	86.631	Ictalurus_punctatus
ENSGAFG00000012527	gfm1	97	79.890	ENSSTOG00000010150	GFM1	98	79.890	Ictidomys_tridecemlineatus
ENSGAFG00000012527	gfm1	100	79.095	ENSJJAG00000016447	Gfm1	100	79.095	Jaculus_jaculus
ENSGAFG00000012527	gfm1	100	88.770	ENSKMAG00000020768	gfm1	100	88.770	Kryptolebias_marmoratus
ENSGAFG00000012527	gfm1	94	90.870	ENSLBEG00000021315	gfm1	100	90.870	Labrus_bergylta
ENSGAFG00000012527	gfm1	100	81.818	ENSLACG00000012295	GFM1	100	81.818	Latimeria_chalumnae
ENSGAFG00000012527	gfm1	97	79.754	ENSLOCG00000003778	gfm1	100	79.754	Lepisosteus_oculatus
ENSGAFG00000012527	gfm1	99	78.667	ENSLAFG00000010945	GFM1	99	79.583	Loxodonta_africana
ENSGAFG00000012527	gfm1	100	79.627	ENSMFAG00000035731	GFM1	100	79.627	Macaca_fascicularis
ENSGAFG00000012527	gfm1	100	79.627	ENSMMUG00000004961	GFM1	100	79.627	Macaca_mulatta
ENSGAFG00000012527	gfm1	100	79.494	ENSMNEG00000033245	GFM1	100	79.494	Macaca_nemestrina
ENSGAFG00000012527	gfm1	97	79.724	ENSMLEG00000030908	GFM1	99	79.595	Mandrillus_leucophaeus
ENSGAFG00000012527	gfm1	100	89.572	ENSMAMG00000011760	gfm1	100	89.572	Mastacembelus_armatus
ENSGAFG00000012527	gfm1	100	90.775	ENSMZEG00005016639	gfm1	100	90.775	Maylandia_zebra
ENSGAFG00000012527	gfm1	97	79.972	ENSMGAG00000010641	GFM1	97	79.972	Meleagris_gallopavo
ENSGAFG00000012527	gfm1	100	79.760	ENSMAUG00000000611	Gfm1	100	79.760	Mesocricetus_auratus
ENSGAFG00000012527	gfm1	97	82.094	ENSMICG00000049086	GFM1	96	82.094	Microcebus_murinus
ENSGAFG00000012527	gfm1	100	80.027	ENSMOCG00000000465	Gfm1	100	80.027	Microtus_ochrogaster
ENSGAFG00000012527	gfm1	97	90.496	ENSMMOG00000012538	gfm1	98	90.496	Mola_mola
ENSGAFG00000012527	gfm1	99	79.082	ENSMODG00000015673	GFM1	99	79.082	Monodelphis_domestica
ENSGAFG00000012527	gfm1	96	87.727	ENSMALG00000012508	gfm1	95	87.727	Monopterus_albus
ENSGAFG00000012527	gfm1	100	79.893	MGP_CAROLIEiJ_G0025052	Gfm1	100	80.337	Mus_caroli
ENSGAFG00000012527	gfm1	100	79.627	ENSMUSG00000027774	Gfm1	100	79.627	Mus_musculus
ENSGAFG00000012527	gfm1	100	78.961	MGP_PahariEiJ_G0026495	Gfm1	100	79.588	Mus_pahari
ENSGAFG00000012527	gfm1	100	79.627	MGP_SPRETEiJ_G0025994	Gfm1	100	79.963	Mus_spretus
ENSGAFG00000012527	gfm1	97	82.094	ENSMPUG00000002859	GFM1	96	82.094	Mustela_putorius_furo
ENSGAFG00000012527	gfm1	97	81.818	ENSMLUG00000000452	GFM1	96	81.818	Myotis_lucifugus
ENSGAFG00000012527	gfm1	100	79.333	ENSNGAG00000012375	Gfm1	100	79.333	Nannospalax_galili
ENSGAFG00000012527	gfm1	97	91.209	ENSNBRG00000004631	gfm1	99	91.209	Neolamprologus_brichardi
ENSGAFG00000012527	gfm1	97	81.818	ENSNLEG00000004176	GFM1	100	80.027	Nomascus_leucogenys
ENSGAFG00000012527	gfm1	91	72.353	ENSMEUG00000007784	GFM1	99	72.353	Notamacropus_eugenii
ENSGAFG00000012527	gfm1	100	79.439	ENSOPRG00000009860	GFM1	100	79.439	Ochotona_princeps
ENSGAFG00000012527	gfm1	98	81.199	ENSODEG00000004316	GFM1	97	81.199	Octodon_degus
ENSGAFG00000012527	gfm1	100	91.176	ENSONIG00000003772	gfm1	100	91.176	Oreochromis_niloticus
ENSGAFG00000012527	gfm1	98	81.744	ENSOCUG00000013561	GFM1	100	80.637	Oryctolagus_cuniculus
ENSGAFG00000012527	gfm1	95	91.243	ENSORLG00000006487	gfm1	100	91.243	Oryzias_latipes
ENSGAFG00000012527	gfm1	100	90.775	ENSORLG00020003362	gfm1	100	90.775	Oryzias_latipes_hni
ENSGAFG00000012527	gfm1	100	90.241	ENSORLG00015005829	gfm1	100	90.241	Oryzias_latipes_hsok
ENSGAFG00000012527	gfm1	100	90.909	ENSOMEG00000012894	gfm1	100	90.909	Oryzias_melastigma
ENSGAFG00000012527	gfm1	97	81.405	ENSOGAG00000008298	GFM1	96	81.405	Otolemur_garnettii
ENSGAFG00000012527	gfm1	96	81.276	ENSOARG00000002409	GFM1	99	81.276	Ovis_aries
ENSGAFG00000012527	gfm1	98	81.224	ENSPPAG00000033881	GFM1	100	80.027	Pan_paniscus
ENSGAFG00000012527	gfm1	97	81.680	ENSPPRG00000009281	GFM1	100	79.841	Panthera_pardus
ENSGAFG00000012527	gfm1	97	81.543	ENSPTIG00000012416	GFM1	100	79.708	Panthera_tigris_altaica
ENSGAFG00000012527	gfm1	98	81.224	ENSPTRG00000015570	GFM1	100	80.027	Pan_troglodytes
ENSGAFG00000012527	gfm1	100	79.627	ENSPANG00000016512	GFM1	100	79.627	Papio_anubis
ENSGAFG00000012527	gfm1	100	83.422	ENSPKIG00000004876	gfm1	100	83.422	Paramormyrops_kingsleyae
ENSGAFG00000012527	gfm1	100	80.507	ENSPSIG00000012567	GFM1	99	80.507	Pelodiscus_sinensis
ENSGAFG00000012527	gfm1	97	86.897	ENSPMGG00000014068	gfm1	100	86.897	Periophthalmus_magnuspinnatus
ENSGAFG00000012527	gfm1	100	79.893	ENSPEMG00000008942	Gfm1	100	79.893	Peromyscus_maniculatus_bairdii
ENSGAFG00000012527	gfm1	86	78.295	ENSPCIG00000020195	GFM1	96	80.782	Phascolarctos_cinereus
ENSGAFG00000012527	gfm1	100	97.326	ENSPFOG00000011022	gfm1	100	97.326	Poecilia_formosa
ENSGAFG00000012527	gfm1	99	95.811	ENSPLAG00000019585	gfm1	100	96.348	Poecilia_latipinna
ENSGAFG00000012527	gfm1	100	97.193	ENSPMEG00000012376	gfm1	100	97.193	Poecilia_mexicana
ENSGAFG00000012527	gfm1	100	96.925	ENSPREG00000001332	gfm1	95	96.925	Poecilia_reticulata
ENSGAFG00000012527	gfm1	98	80.680	ENSPPYG00000014244	GFM1	100	79.494	Pongo_abelii
ENSGAFG00000012527	gfm1	94	79.516	ENSPCAG00000008934	GFM1	100	79.516	Procavia_capensis
ENSGAFG00000012527	gfm1	98	80.926	ENSPCOG00000022259	GFM1	100	79.708	Propithecus_coquereli
ENSGAFG00000012527	gfm1	97	81.129	ENSPVAG00000013605	GFM1	96	81.129	Pteropus_vampyrus
ENSGAFG00000012527	gfm1	100	90.508	ENSPNYG00000006037	gfm1	100	90.508	Pundamilia_nyererei
ENSGAFG00000012527	gfm1	100	86.497	ENSPNAG00000001237	gfm1	100	86.497	Pygocentrus_nattereri
ENSGAFG00000012527	gfm1	97	81.379	ENSRNOG00000012873	Gfm1	97	81.379	Rattus_norvegicus
ENSGAFG00000012527	gfm1	98	80.816	ENSRBIG00000031363	GFM1	100	79.627	Rhinopithecus_bieti
ENSGAFG00000012527	gfm1	98	80.952	ENSRROG00000031081	GFM1	100	79.760	Rhinopithecus_roxellana
ENSGAFG00000012527	gfm1	92	56.340	YLR069C	-	90	56.340	Saccharomyces_cerevisiae
ENSGAFG00000012527	gfm1	100	79.494	ENSSBOG00000023252	GFM1	100	79.494	Saimiri_boliviensis_boliviensis
ENSGAFG00000012527	gfm1	97	81.328	ENSSHAG00000017772	GFM1	97	81.103	Sarcophilus_harrisii
ENSGAFG00000012527	gfm1	100	83.578	ENSSFOG00015003117	gfm1	100	83.578	Scleropages_formosus
ENSGAFG00000012527	gfm1	100	88.503	ENSSMAG00000013221	gfm1	100	88.503	Scophthalmus_maximus
ENSGAFG00000012527	gfm1	100	90.241	ENSSDUG00000018665	gfm1	100	90.241	Seriola_dumerili
ENSGAFG00000012527	gfm1	100	90.107	ENSSLDG00000020606	gfm1	100	90.107	Seriola_lalandi_dorsalis
ENSGAFG00000012527	gfm1	99	77.131	ENSSPUG00000018686	GFM1	100	77.131	Sphenodon_punctatus
ENSGAFG00000012527	gfm1	100	91.444	ENSSPAG00000008800	gfm1	100	91.444	Stegastes_partitus
ENSGAFG00000012527	gfm1	96	81.755	ENSSSCG00000025651	GFM1	95	81.755	Sus_scrofa
ENSGAFG00000012527	gfm1	100	87.968	ENSTRUG00000009244	gfm1	100	87.968	Takifugu_rubripes
ENSGAFG00000012527	gfm1	100	90.241	ENSTNIG00000007729	gfm1	100	90.241	Tetraodon_nigroviridis
ENSGAFG00000012527	gfm1	90	73.037	ENSTBEG00000017404	GFM1	89	73.037	Tupaia_belangeri
ENSGAFG00000012527	gfm1	96	82.033	ENSTTRG00000001735	GFM1	95	82.033	Tursiops_truncatus
ENSGAFG00000012527	gfm1	97	81.956	ENSUAMG00000026381	GFM1	100	79.973	Ursus_americanus
ENSGAFG00000012527	gfm1	97	81.956	ENSUMAG00000011268	GFM1	100	79.973	Ursus_maritimus
ENSGAFG00000012527	gfm1	97	77.931	ENSVPAG00000009444	GFM1	96	77.931	Vicugna_pacos
ENSGAFG00000012527	gfm1	98	81.148	ENSVVUG00000020091	GFM1	100	81.805	Vulpes_vulpes
ENSGAFG00000012527	gfm1	100	80.186	ENSXETG00000032551	GFM1	100	80.186	Xenopus_tropicalis
ENSGAFG00000012527	gfm1	54	93.797	ENSXCOG00000012590	gfm1	93	93.797	Xiphophorus_couchianus
ENSGAFG00000012527	gfm1	100	97.861	ENSXMAG00000000261	gfm1	100	97.861	Xiphophorus_maculatus