EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4894 bases
Position: chrNHOQ01001816.1:2737154-2742047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018546	zf-C2H2	PF00096.26	2e-22	1	4
ENSGAFP00000018546	zf-C2H2	PF00096.26	2e-22	2	4
ENSGAFP00000018546	zf-C2H2	PF00096.26	2e-22	3	4
ENSGAFP00000018546	zf-C2H2	PF00096.26	2e-22	4	4
ENSGAFP00000018546	zf-met	PF12874.7	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018724	-	2625	-	ENSGAFP00000018546	483 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012545	-	96	36.893	ENSGAFG00000011998	-	96	36.893
ENSGAFG00000012545	-	66	30.000	ENSGAFG00000011965	-	64	34.810
ENSGAFG00000012545	-	65	31.414	ENSGAFG00000013019	-	96	31.414
ENSGAFG00000012545	-	90	46.809	ENSGAFG00000017066	-	99	46.809
ENSGAFG00000012545	-	53	44.048	ENSGAFG00000020509	-	86	31.154
ENSGAFG00000012545	-	53	38.710	ENSGAFG00000013624	-	56	32.099
ENSGAFG00000012545	-	66	36.842	ENSGAFG00000011999	-	97	33.333
ENSGAFG00000012545	-	59	33.728	ENSGAFG00000014362	-	65	33.333
ENSGAFG00000012545	-	68	33.862	ENSGAFG00000019072	-	92	30.183
ENSGAFG00000012545	-	66	37.288	ENSGAFG00000013055	-	95	37.288
ENSGAFG00000012545	-	80	32.051	ENSGAFG00000013420	-	88	32.051
ENSGAFG00000012545	-	66	32.544	ENSGAFG00000012004	-	85	32.544
ENSGAFG00000012545	-	66	31.466	ENSGAFG00000021132	-	72	31.466
ENSGAFG00000012545	-	65	31.837	ENSGAFG00000021131	-	87	34.483
ENSGAFG00000012545	-	67	37.241	ENSGAFG00000013677	-	99	37.241
ENSGAFG00000012545	-	80	33.503	ENSGAFG00000014088	-	87	33.503
ENSGAFG00000012545	-	73	31.061	ENSGAFG00000008226	-	99	31.061
ENSGAFG00000012545	-	66	34.320	ENSGAFG00000011940	-	85	34.286
ENSGAFG00000012545	-	96	32.000	ENSGAFG00000011326	-	99	34.274
ENSGAFG00000012545	-	52	40.698	ENSGAFG00000021140	-	95	35.542
ENSGAFG00000012545	-	68	40.625	ENSGAFG00000020505	-	83	33.871
ENSGAFG00000012545	-	60	34.459	ENSGAFG00000003150	-	90	34.459
ENSGAFG00000012545	-	96	33.913	ENSGAFG00000013934	-	95	39.773
ENSGAFG00000012545	-	65	31.765	ENSGAFG00000013116	-	76	31.765
ENSGAFG00000012545	-	54	30.827	ENSGAFG00000021427	snai2	66	30.827
ENSGAFG00000012545	-	51	36.264	ENSGAFG00000011290	-	92	36.264
ENSGAFG00000012545	-	66	39.130	ENSGAFG00000011884	-	93	36.264
ENSGAFG00000012545	-	97	33.209	ENSGAFG00000008274	-	99	33.209
ENSGAFG00000012545	-	78	34.132	ENSGAFG00000012035	-	95	34.132
ENSGAFG00000012545	-	58	35.526	ENSGAFG00000014413	-	81	35.526
ENSGAFG00000012545	-	72	34.591	ENSGAFG00000014419	-	81	34.591
ENSGAFG00000012545	-	50	31.390	ENSGAFG00000013408	-	79	41.414
ENSGAFG00000012545	-	51	34.161	ENSGAFG00000013616	-	71	34.161
ENSGAFG00000012545	-	63	38.043	ENSGAFG00000013969	-	86	38.043
ENSGAFG00000012545	-	96	39.344	ENSGAFG00000020507	-	98	39.344
ENSGAFG00000012545	-	92	32.489	ENSGAFG00000007104	-	97	32.489
ENSGAFG00000012545	-	66	31.381	ENSGAFG00000012069	-	99	31.381
ENSGAFG00000012545	-	67	34.641	ENSGAFG00000001879	-	95	34.641
ENSGAFG00000012545	-	96	37.008	ENSGAFG00000013366	-	99	37.008
ENSGAFG00000012545	-	79	34.118	ENSGAFG00000013363	-	97	34.118
ENSGAFG00000012545	-	65	34.177	ENSGAFG00000018302	-	94	31.330
ENSGAFG00000012545	-	80	33.684	ENSGAFG00000014097	-	89	33.684
ENSGAFG00000012545	-	51	32.130	ENSGAFG00000000037	-	95	30.120
ENSGAFG00000012545	-	51	36.095	ENSGAFG00000007098	-	86	31.541
ENSGAFG00000012545	-	65	32.632	ENSGAFG00000013462	-	86	32.632
ENSGAFG00000012545	-	66	37.870	ENSGAFG00000016595	-	98	32.110
ENSGAFG00000012545	-	72	31.579	ENSGAFG00000013396	-	95	30.864
ENSGAFG00000012545	-	88	35.178	ENSGAFG00000011288	-	99	35.178
ENSGAFG00000012545	-	58	30.040	ENSGAFG00000003119	-	63	30.040
ENSGAFG00000012545	-	55	30.472	ENSGAFG00000012953	-	73	30.472
ENSGAFG00000012545	-	67	38.318	ENSGAFG00000011913	si:ch211-161m3.4	94	36.000
ENSGAFG00000012545	-	52	30.350	ENSGAFG00000010637	-	87	33.136
ENSGAFG00000012545	-	98	31.950	ENSGAFG00000010983	-	98	31.950
ENSGAFG00000012545	-	71	30.279	ENSGAFG00000016093	-	96	30.870
ENSGAFG00000012545	-	96	34.286	ENSGAFG00000008231	-	99	31.197
ENSGAFG00000012545	-	52	37.363	ENSGAFG00000018659	-	99	34.722
ENSGAFG00000012545	-	67	37.037	ENSGAFG00000014188	-	96	36.170
ENSGAFG00000012545	-	51	34.911	ENSGAFG00000013430	-	83	34.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012545	-	50	32.609	ENSAPOG00000008319	-	53	32.609	Acanthochromis_polyacanthus
ENSGAFG00000012545	-	65	35.915	ENSACIG00000007464	-	79	35.915	Amphilophus_citrinellus
ENSGAFG00000012545	-	66	44.330	ENSCSEG00000010453	-	86	33.133	Cynoglossus_semilaevis
ENSGAFG00000012545	-	80	30.476	ENSCSEG00000008528	-	69	30.476	Cynoglossus_semilaevis
ENSGAFG00000012545	-	96	36.601	ENSCVAG00000006484	-	96	40.678	Cyprinodon_variegatus
ENSGAFG00000012545	-	66	40.449	ENSCVAG00000006653	-	87	40.449	Cyprinodon_variegatus
ENSGAFG00000012545	-	60	30.822	ENSEBUG00000011449	-	92	30.822	Eptatretus_burgeri
ENSGAFG00000012545	-	58	35.593	ENSELUG00000024007	-	67	35.593	Esox_lucius
ENSGAFG00000012545	-	80	30.303	ENSHCOG00000013489	-	97	31.395	Hippocampus_comes
ENSGAFG00000012545	-	77	31.383	ENSHCOG00000008227	-	88	31.383	Hippocampus_comes
ENSGAFG00000012545	-	94	33.019	ENSHCOG00000019389	-	96	32.075	Hippocampus_comes
ENSGAFG00000012545	-	94	30.286	ENSHCOG00000008213	-	92	30.286	Hippocampus_comes
ENSGAFG00000012545	-	66	34.965	ENSHCOG00000015497	-	86	32.941	Hippocampus_comes
ENSGAFG00000012545	-	65	31.492	ENSLBEG00000006161	-	93	31.492	Labrus_bergylta
ENSGAFG00000012545	-	97	30.952	ENSLBEG00000011210	-	84	30.952	Labrus_bergylta
ENSGAFG00000012545	-	52	30.899	ENSMZEG00005013907	-	72	30.899	Maylandia_zebra
ENSGAFG00000012545	-	71	35.088	ENSNBRG00000006112	-	69	35.088	Neolamprologus_brichardi
ENSGAFG00000012545	-	64	31.739	ENSONIG00000007967	-	68	31.739	Oreochromis_niloticus
ENSGAFG00000012545	-	96	33.333	ENSPKIG00000005164	-	100	33.333	Paramormyrops_kingsleyae
ENSGAFG00000012545	-	66	33.333	ENSPMGG00000002661	-	95	33.333	Periophthalmus_magnuspinnatus
ENSGAFG00000012545	-	65	31.356	ENSPLAG00000010067	-	91	31.356	Poecilia_latipinna
ENSGAFG00000012545	-	66	30.380	ENSPMEG00000002953	-	76	30.380	Poecilia_mexicana
ENSGAFG00000012545	-	96	40.000	ENSPMEG00000024117	-	99	37.795	Poecilia_mexicana
ENSGAFG00000012545	-	96	72.817	ENSPREG00000008907	-	100	72.817	Poecilia_reticulata
ENSGAFG00000012545	-	60	30.769	ENSSMAG00000013291	-	90	32.927	Scophthalmus_maximus
ENSGAFG00000012545	-	80	41.489	ENSSDUG00000020774	-	79	40.404	Seriola_dumerili
ENSGAFG00000012545	-	52	39.024	ENSXETG00000012506	znf91	99	39.024	Xenopus_tropicalis
ENSGAFG00000012545	-	71	30.901	ENSXCOG00000003441	-	88	30.901	Xiphophorus_couchianus
ENSGAFG00000012545	-	71	76.404	ENSXMAG00000022657	-	85	76.404	Xiphophorus_maculatus