EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012565 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5687 bases
Position: chrNHOQ01002268.1:8526637-8532323
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018582	RRM_1	PF00076.22	7.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018760	PABPN1L-201	3025	-	ENSGAFP00000018582	263 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012565	PABPN1L	59	62.581	ENSGAFG00000017099	pabpn1	63	61.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012565	PABPN1L	71	51.244	ENSG00000205022	PABPN1L	58	53.374	Homo_sapiens
ENSGAFG00000012565	PABPN1L	91	90.000	ENSAPOG00000000685	PABPN1L	78	89.583	Acanthochromis_polyacanthus
ENSGAFG00000012565	PABPN1L	91	86.611	ENSACIG00000021400	PABPN1L	98	86.611	Amphilophus_citrinellus
ENSGAFG00000012565	PABPN1L	100	90.875	ENSAOCG00000019844	PABPN1L	100	90.875	Amphiprion_ocellaris
ENSGAFG00000012565	PABPN1L	100	91.255	ENSAPEG00000019534	PABPN1L	100	91.255	Amphiprion_percula
ENSGAFG00000012565	PABPN1L	91	90.795	ENSATEG00000011646	PABPN1L	95	89.958	Anabas_testudineus
ENSGAFG00000012565	PABPN1L	66	57.714	ENSACAG00000013250	PABPN1L	60	68.468	Anolis_carolinensis
ENSGAFG00000012565	PABPN1L	71	50.500	ENSANAG00000038178	PABPN1L	58	54.037	Aotus_nancymaae
ENSGAFG00000012565	PABPN1L	100	87.072	ENSACLG00000025147	PABPN1L	100	87.833	Astatotilapia_calliptera
ENSGAFG00000012565	PABPN1L	100	82.576	ENSCSEG00000001142	pabpn1l	100	81.818	Cynoglossus_semilaevis
ENSGAFG00000012565	PABPN1L	100	97.338	ENSCVAG00000015547	PABPN1L	100	97.338	Cyprinodon_variegatus
ENSGAFG00000012565	PABPN1L	69	51.934	ENSDNOG00000034677	PABPN1L	57	53.947	Dasypus_novemcinctus
ENSGAFG00000012565	PABPN1L	72	50.000	ENSEASG00005000777	PABPN1L	61	51.786	Equus_asinus_asinus
ENSGAFG00000012565	PABPN1L	96	66.929	ENSELUG00000018385	PABPN1L	96	62.451	Esox_lucius
ENSGAFG00000012565	PABPN1L	63	52.632	ENSFCAG00000010465	PABPN1L	59	51.515	Felis_catus
ENSGAFG00000012565	PABPN1L	60	61.250	ENSFALG00000003319	PABPN1L	59	59.459	Ficedula_albicollis
ENSGAFG00000012565	PABPN1L	58	55.975	ENSFDAG00000021067	PABPN1L	60	52.147	Fukomys_damarensis
ENSGAFG00000012565	PABPN1L	100	95.817	ENSFHEG00000018295	PABPN1L	100	95.817	Fundulus_heteroclitus
ENSGAFG00000012565	PABPN1L	100	73.408	ENSGMOG00000001475	PABPN1L	100	72.285	Gadus_morhua
ENSGAFG00000012565	PABPN1L	55	61.379	ENSGALG00000006242	PABPN1L	63	64.865	Gallus_gallus
ENSGAFG00000012565	PABPN1L	100	83.521	ENSGACG00000015428	PABPN1L	100	83.521	Gasterosteus_aculeatus
ENSGAFG00000012565	PABPN1L	71	51.456	ENSGGOG00000012670	PABPN1L	59	52.695	Gorilla_gorilla
ENSGAFG00000012565	PABPN1L	100	88.973	ENSHBUG00000002388	PABPN1L	100	88.213	Haplochromis_burtoni
ENSGAFG00000012565	PABPN1L	100	84.701	ENSHCOG00000004151	PABPN1L	99	83.582	Hippocampus_comes
ENSGAFG00000012565	PABPN1L	67	63.536	ENSIPUG00000023583	PABPN1L	73	67.550	Ictalurus_punctatus
ENSGAFG00000012565	PABPN1L	74	51.031	ENSJJAG00000006433	Pabpn1l	58	53.459	Jaculus_jaculus
ENSGAFG00000012565	PABPN1L	82	92.093	ENSKMAG00000001112	PABPN1L	92	93.720	Kryptolebias_marmoratus
ENSGAFG00000012565	PABPN1L	100	85.283	ENSLBEG00000011647	PABPN1L	97	87.170	Labrus_bergylta
ENSGAFG00000012565	PABPN1L	71	52.427	ENSMFAG00000002924	PABPN1L	59	53.892	Macaca_fascicularis
ENSGAFG00000012565	PABPN1L	71	53.140	ENSMMUG00000012438	PABPN1L	59	53.614	Macaca_mulatta
ENSGAFG00000012565	PABPN1L	71	53.365	ENSMNEG00000044808	PABPN1L	59	53.892	Macaca_nemestrina
ENSGAFG00000012565	PABPN1L	71	53.140	ENSMLEG00000032667	PABPN1L	59	53.892	Mandrillus_leucophaeus
ENSGAFG00000012565	PABPN1L	100	87.072	ENSMZEG00005002186	PABPN1L	100	87.833	Maylandia_zebra
ENSGAFG00000012565	PABPN1L	75	90.909	ENSMMOG00000017714	PABPN1L	86	90.909	Mola_mola
ENSGAFG00000012565	PABPN1L	100	85.171	ENSMALG00000016926	PABPN1L	100	84.791	Monopterus_albus
ENSGAFG00000012565	PABPN1L	90	90.336	ENSNBRG00000017078	PABPN1L	100	89.496	Neolamprologus_brichardi
ENSGAFG00000012565	PABPN1L	100	83.270	ENSORLG00000026560	PABPN1L	100	80.608	Oryzias_latipes
ENSGAFG00000012565	PABPN1L	100	83.270	ENSORLG00020015068	PABPN1L	100	80.608	Oryzias_latipes_hni
ENSGAFG00000012565	PABPN1L	100	83.270	ENSORLG00015000397	PABPN1L	100	80.608	Oryzias_latipes_hsok
ENSGAFG00000012565	PABPN1L	100	81.749	ENSOMEG00000017896	PABPN1L	72	81.749	Oryzias_melastigma
ENSGAFG00000012565	PABPN1L	63	52.632	ENSPPRG00000015106	PABPN1L	59	51.515	Panthera_pardus
ENSGAFG00000012565	PABPN1L	63	52.121	ENSPTIG00000015606	PABPN1L	61	50.314	Panthera_tigris_altaica
ENSGAFG00000012565	PABPN1L	61	63.354	ENSPSIG00000003404	PABPN1L	52	75.510	Pelodiscus_sinensis
ENSGAFG00000012565	PABPN1L	81	84.977	ENSPMGG00000013927	PABPN1L	91	85.990	Periophthalmus_magnuspinnatus
ENSGAFG00000012565	PABPN1L	52	60.584	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSGAFG00000012565	PABPN1L	100	99.620	ENSPFOG00000007001	PABPN1L	100	99.620	Poecilia_formosa
ENSGAFG00000012565	PABPN1L	100	99.620	ENSPLAG00000018431	PABPN1L	100	99.620	Poecilia_latipinna
ENSGAFG00000012565	PABPN1L	66	93.820	ENSPMEG00000000169	-	91	91.304	Poecilia_mexicana
ENSGAFG00000012565	PABPN1L	100	99.620	ENSPMEG00000009108	PABPN1L	100	99.620	Poecilia_mexicana
ENSGAFG00000012565	PABPN1L	88	99.567	ENSPREG00000022533	PABPN1L	100	99.567	Poecilia_reticulata
ENSGAFG00000012565	PABPN1L	71	50.244	ENSPPYG00000007655	PABPN1L	58	52.096	Pongo_abelii
ENSGAFG00000012565	PABPN1L	71	51.980	ENSPVAG00000002716	PABPN1L	58	54.545	Pteropus_vampyrus
ENSGAFG00000012565	PABPN1L	100	87.072	ENSPNYG00000004803	PABPN1L	100	87.833	Pundamilia_nyererei
ENSGAFG00000012565	PABPN1L	71	50.971	ENSRBIG00000030740	PABPN1L	59	52.695	Rhinopithecus_bieti
ENSGAFG00000012565	PABPN1L	71	50.971	ENSRROG00000032240	-	59	52.695	Rhinopithecus_roxellana
ENSGAFG00000012565	PABPN1L	71	52.885	ENSRROG00000035483	-	59	53.293	Rhinopithecus_roxellana
ENSGAFG00000012565	PABPN1L	71	51.244	ENSSBOG00000018410	PABPN1L	58	52.727	Saimiri_boliviensis_boliviensis
ENSGAFG00000012565	PABPN1L	100	83.271	ENSSMAG00000021348	PABPN1L	100	81.041	Scophthalmus_maximus
ENSGAFG00000012565	PABPN1L	100	90.494	ENSSDUG00000006986	PABPN1L	100	90.494	Seriola_dumerili
ENSGAFG00000012565	PABPN1L	100	90.875	ENSSLDG00000021845	PABPN1L	100	90.875	Seriola_lalandi_dorsalis
ENSGAFG00000012565	PABPN1L	100	90.114	ENSSPAG00000017978	PABPN1L	100	90.114	Stegastes_partitus
ENSGAFG00000012565	PABPN1L	100	79.468	ENSTRUG00000024725	PABPN1L	100	77.947	Takifugu_rubripes
ENSGAFG00000012565	PABPN1L	73	92.708	ENSTNIG00000009416	PABPN1L	100	92.708	Tetraodon_nigroviridis
ENSGAFG00000012565	PABPN1L	56	55.346	ENSXETG00000011258	pabpn1l	72	54.140	Xenopus_tropicalis
ENSGAFG00000012565	PABPN1L	88	99.567	ENSXCOG00000003254	PABPN1L	100	99.567	Xiphophorus_couchianus
ENSGAFG00000012565	PABPN1L	81	94.366	ENSXMAG00000029090	PABPN1L	89	99.495	Xiphophorus_maculatus