EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012578 (Gene tree)
Gene ID: -
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2342 bases
Position: chrNHOQ01002889.1:1357652-1359993
Accession: ZDB-GENE-041024-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018595	Sas10_Utp3	PF04000.15	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018773	-	1821	-	ENSGAFP00000018595	156 (aa)	-	UPI000DD222AD

Gene Model

Click here to download ENSGAFG00000012578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012578	c1d	83	65.116	ENSG00000197223	C1D	92	64.615	Homo_sapiens
ENSGAFG00000012578	c1d	98	77.273	ENSAPOG00000005466	c1d	99	77.273	Acanthochromis_polyacanthus
ENSGAFG00000012578	c1d	83	65.385	ENSAMEG00000004859	C1D	89	65.385	Ailuropoda_melanoleuca
ENSGAFG00000012578	c1d	87	79.259	ENSACIG00000012684	c1d	88	79.259	Amphilophus_citrinellus
ENSGAFG00000012578	c1d	97	78.431	ENSAOCG00000020354	c1d	99	78.431	Amphiprion_ocellaris
ENSGAFG00000012578	c1d	97	77.778	ENSAPEG00000001403	c1d	99	77.778	Amphiprion_percula
ENSGAFG00000012578	c1d	97	75.163	ENSATEG00000012922	c1d	99	75.163	Anabas_testudineus
ENSGAFG00000012578	c1d	76	66.102	ENSAPLG00000009320	C1D	81	66.102	Anas_platyrhynchos
ENSGAFG00000012578	c1d	76	70.339	ENSACAG00000001337	C1D	97	70.339	Anolis_carolinensis
ENSGAFG00000012578	c1d	83	63.846	ENSANAG00000035972	-	92	63.846	Aotus_nancymaae
ENSGAFG00000012578	c1d	83	60.769	ENSANAG00000005773	-	92	60.769	Aotus_nancymaae
ENSGAFG00000012578	c1d	93	73.793	ENSACLG00000026206	c1d	94	77.241	Astatotilapia_calliptera
ENSGAFG00000012578	c1d	93	66.897	ENSAMXG00000043212	c1d	96	66.897	Astyanax_mexicanus
ENSGAFG00000012578	c1d	83	65.385	ENSBTAG00000049002	C1D	92	65.385	Bos_taurus
ENSGAFG00000012578	c1d	71	60.909	ENSCJAG00000044668	-	86	60.909	Callithrix_jacchus
ENSGAFG00000012578	c1d	83	64.615	ENSCJAG00000006589	C1D	86	64.615	Callithrix_jacchus
ENSGAFG00000012578	c1d	83	66.154	ENSCAFG00000030099	C1D	92	66.154	Canis_familiaris
ENSGAFG00000012578	c1d	83	66.154	ENSCAFG00020026997	C1D	92	66.154	Canis_lupus_dingo
ENSGAFG00000012578	c1d	83	65.385	ENSCHIG00000025729	C1D	92	65.385	Capra_hircus
ENSGAFG00000012578	c1d	83	65.385	ENSTSYG00000035739	-	92	65.385	Carlito_syrichta
ENSGAFG00000012578	c1d	70	66.055	ENSTSYG00000026573	-	69	66.055	Carlito_syrichta
ENSGAFG00000012578	c1d	69	61.682	ENSCAPG00000011523	-	89	61.682	Cavia_aperea
ENSGAFG00000012578	c1d	69	62.617	ENSCPOG00000020112	-	89	62.617	Cavia_porcellus
ENSGAFG00000012578	c1d	83	66.667	ENSCPOG00000037986	-	91	66.667	Cavia_porcellus
ENSGAFG00000012578	c1d	83	64.615	ENSCCAG00000030405	-	92	64.615	Cebus_capucinus
ENSGAFG00000012578	c1d	83	63.846	ENSCATG00000045336	C1D	92	63.846	Cercocebus_atys
ENSGAFG00000012578	c1d	87	62.222	ENSCATG00000043348	-	96	62.222	Cercocebus_atys
ENSGAFG00000012578	c1d	83	66.154	ENSCLAG00000011883	C1D	92	66.154	Chinchilla_lanigera
ENSGAFG00000012578	c1d	83	63.846	ENSCSAG00000014811	C1D	92	63.846	Chlorocebus_sabaeus
ENSGAFG00000012578	c1d	83	65.385	ENSCHOG00000006719	C1D	73	65.385	Choloepus_hoffmanni
ENSGAFG00000012578	c1d	78	64.463	ENSCPBG00000014451	C1D	82	64.463	Chrysemys_picta_bellii
ENSGAFG00000012578	c1d	74	48.276	ENSCING00000020906	-	71	48.551	Ciona_intestinalis
ENSGAFG00000012578	c1d	78	46.721	ENSCSAVG00000000150	-	70	46.721	Ciona_savignyi
ENSGAFG00000012578	c1d	68	64.151	ENSCANG00000036599	-	86	64.151	Colobus_angolensis_palliatus
ENSGAFG00000012578	c1d	83	64.341	ENSCANG00000035564	C1D	92	63.846	Colobus_angolensis_palliatus
ENSGAFG00000012578	c1d	83	64.615	ENSCGRG00001023376	C1d	92	64.615	Cricetulus_griseus_chok1gshd
ENSGAFG00000012578	c1d	83	64.615	ENSCGRG00000010245	C1d	92	64.615	Cricetulus_griseus_crigri
ENSGAFG00000012578	c1d	100	73.248	ENSCSEG00000000587	c1d	97	77.143	Cynoglossus_semilaevis
ENSGAFG00000012578	c1d	98	84.314	ENSCVAG00000004603	c1d	97	87.075	Cyprinodon_variegatus
ENSGAFG00000012578	c1d	76	66.949	ENSDARG00000021112	c1d	85	66.667	Danio_rerio
ENSGAFG00000012578	c1d	83	59.231	ENSDNOG00000046068	-	92	59.231	Dasypus_novemcinctus
ENSGAFG00000012578	c1d	83	63.846	ENSDORG00000003300	C1d	92	63.846	Dipodomys_ordii
ENSGAFG00000012578	c1d	58	70.000	ENSETEG00000014857	C1D	95	70.000	Echinops_telfairi
ENSGAFG00000012578	c1d	76	50.420	ENSEBUG00000006874	c1d	75	50.420	Eptatretus_burgeri
ENSGAFG00000012578	c1d	83	65.385	ENSEASG00005007307	C1D	84	65.385	Equus_asinus_asinus
ENSGAFG00000012578	c1d	83	65.891	ENSECAG00000002187	C1D	93	65.385	Equus_caballus
ENSGAFG00000012578	c1d	78	76.033	ENSELUG00000014823	c1d	83	76.033	Esox_lucius
ENSGAFG00000012578	c1d	83	65.385	ENSFCAG00000028933	C1D	92	65.385	Felis_catus
ENSGAFG00000012578	c1d	76	67.227	ENSFALG00000013640	C1D	72	67.227	Ficedula_albicollis
ENSGAFG00000012578	c1d	83	65.385	ENSFDAG00000010462	-	92	65.385	Fukomys_damarensis
ENSGAFG00000012578	c1d	83	53.435	ENSFDAG00000014175	-	91	53.435	Fukomys_damarensis
ENSGAFG00000012578	c1d	100	83.974	ENSFHEG00000010545	c1d	100	83.974	Fundulus_heteroclitus
ENSGAFG00000012578	c1d	77	71.667	ENSGMOG00000013911	-	95	71.667	Gadus_morhua
ENSGAFG00000012578	c1d	76	67.227	ENSGALG00000008765	C1D	83	67.227	Gallus_gallus
ENSGAFG00000012578	c1d	78	77.869	ENSGACG00000011981	c1d	95	77.869	Gasterosteus_aculeatus
ENSGAFG00000012578	c1d	78	63.636	ENSGAGG00000013383	C1D	82	63.636	Gopherus_agassizii
ENSGAFG00000012578	c1d	83	65.116	ENSGGOG00000025982	-	72	65.116	Gorilla_gorilla
ENSGAFG00000012578	c1d	87	60.741	ENSGGOG00000025808	-	78	60.741	Gorilla_gorilla
ENSGAFG00000012578	c1d	81	63.780	ENSGGOG00000022296	-	90	63.780	Gorilla_gorilla
ENSGAFG00000012578	c1d	95	73.649	ENSHBUG00000018531	c1d	86	77.027	Haplochromis_burtoni
ENSGAFG00000012578	c1d	79	66.667	ENSHGLG00000012332	-	92	64.615	Heterocephalus_glaber_female
ENSGAFG00000012578	c1d	86	59.701	ENSHGLG00000021219	-	95	59.701	Heterocephalus_glaber_female
ENSGAFG00000012578	c1d	86	60.448	ENSHGLG00100019951	-	95	60.448	Heterocephalus_glaber_male
ENSGAFG00000012578	c1d	83	63.846	ENSHGLG00100000221	-	92	63.846	Heterocephalus_glaber_male
ENSGAFG00000012578	c1d	96	70.861	ENSHCOG00000014589	c1d	99	70.861	Hippocampus_comes
ENSGAFG00000012578	c1d	96	70.861	ENSHCOG00000014568	C1D	99	70.861	Hippocampus_comes
ENSGAFG00000012578	c1d	74	69.828	ENSIPUG00000018661	c1d	80	69.828	Ictalurus_punctatus
ENSGAFG00000012578	c1d	83	64.615	ENSSTOG00000012346	C1D	92	64.615	Ictidomys_tridecemlineatus
ENSGAFG00000012578	c1d	75	62.810	ENSJJAG00000023186	-	92	62.810	Jaculus_jaculus
ENSGAFG00000012578	c1d	85	62.121	ENSJJAG00000009540	-	96	62.121	Jaculus_jaculus
ENSGAFG00000012578	c1d	83	58.915	ENSJJAG00000005044	-	93	58.915	Jaculus_jaculus
ENSGAFG00000012578	c1d	83	53.488	ENSJJAG00000016086	-	93	53.488	Jaculus_jaculus
ENSGAFG00000012578	c1d	98	82.353	ENSKMAG00000015077	c1d	99	82.353	Kryptolebias_marmoratus
ENSGAFG00000012578	c1d	95	78.523	ENSLBEG00000008351	c1d	96	78.523	Labrus_bergylta
ENSGAFG00000012578	c1d	80	68.000	ENSLACG00000007516	C1D	84	68.000	Latimeria_chalumnae
ENSGAFG00000012578	c1d	96	60.667	ENSLOCG00000016024	c1d	97	60.667	Lepisosteus_oculatus
ENSGAFG00000012578	c1d	83	64.615	ENSLAFG00000002083	C1D	92	64.615	Loxodonta_africana
ENSGAFG00000012578	c1d	83	63.846	ENSMFAG00000034261	C1D	92	63.846	Macaca_fascicularis
ENSGAFG00000012578	c1d	83	62.308	ENSMFAG00000028681	-	92	62.308	Macaca_fascicularis
ENSGAFG00000012578	c1d	87	62.222	ENSMFAG00000034034	-	96	62.222	Macaca_fascicularis
ENSGAFG00000012578	c1d	87	61.481	ENSMMUG00000043184	-	96	61.481	Macaca_mulatta
ENSGAFG00000012578	c1d	85	62.406	ENSMMUG00000041557	C1D	96	62.406	Macaca_mulatta
ENSGAFG00000012578	c1d	83	62.308	ENSMMUG00000017209	-	92	62.308	Macaca_mulatta
ENSGAFG00000012578	c1d	87	62.222	ENSMNEG00000020626	-	96	62.222	Macaca_nemestrina
ENSGAFG00000012578	c1d	83	63.846	ENSMNEG00000040612	C1D	92	63.846	Macaca_nemestrina
ENSGAFG00000012578	c1d	87	62.222	ENSMLEG00000028412	-	96	62.222	Mandrillus_leucophaeus
ENSGAFG00000012578	c1d	83	63.846	ENSMLEG00000027619	C1D	92	63.846	Mandrillus_leucophaeus
ENSGAFG00000012578	c1d	100	76.433	ENSMAMG00000022156	c1d	100	77.707	Mastacembelus_armatus
ENSGAFG00000012578	c1d	98	71.895	ENSMZEG00005027343	c1d	99	77.027	Maylandia_zebra
ENSGAFG00000012578	c1d	78	65.289	ENSMGAG00000004517	C1D	85	65.289	Meleagris_gallopavo
ENSGAFG00000012578	c1d	83	65.385	ENSMAUG00000008974	C1d	92	65.385	Mesocricetus_auratus
ENSGAFG00000012578	c1d	83	65.385	ENSMICG00000032141	C1D	92	65.385	Microcebus_murinus
ENSGAFG00000012578	c1d	84	64.885	ENSMOCG00000010860	C1d	93	64.885	Microtus_ochrogaster
ENSGAFG00000012578	c1d	94	74.497	ENSMMOG00000007332	c1d	96	74.497	Mola_mola
ENSGAFG00000012578	c1d	85	61.364	ENSMODG00000003561	C1D	93	61.364	Monodelphis_domestica
ENSGAFG00000012578	c1d	98	75.163	ENSMALG00000020864	c1d	95	82.258	Monopterus_albus
ENSGAFG00000012578	c1d	83	65.385	MGP_CAROLIEiJ_G0016110	C1d	94	69.369	Mus_caroli
ENSGAFG00000012578	c1d	83	65.385	ENSMUSG00000000581	C1d	94	69.369	Mus_musculus
ENSGAFG00000012578	c1d	83	66.154	MGP_PahariEiJ_G0016781	C1d	94	70.270	Mus_pahari
ENSGAFG00000012578	c1d	83	65.385	MGP_SPRETEiJ_G0016952	C1d	94	69.369	Mus_spretus
ENSGAFG00000012578	c1d	83	66.154	ENSMPUG00000006224	C1D	92	66.154	Mustela_putorius_furo
ENSGAFG00000012578	c1d	83	66.154	ENSMLUG00000010791	-	92	66.154	Myotis_lucifugus
ENSGAFG00000012578	c1d	83	64.615	ENSMLUG00000029990	-	92	64.615	Myotis_lucifugus
ENSGAFG00000012578	c1d	83	64.615	ENSMLUG00000024947	-	92	64.615	Myotis_lucifugus
ENSGAFG00000012578	c1d	83	62.308	ENSNGAG00000011872	-	92	62.308	Nannospalax_galili
ENSGAFG00000012578	c1d	76	62.185	ENSNGAG00000012482	-	94	62.185	Nannospalax_galili
ENSGAFG00000012578	c1d	81	63.780	ENSNGAG00000016675	-	90	63.780	Nannospalax_galili
ENSGAFG00000012578	c1d	95	72.973	ENSNBRG00000010704	c1d	99	76.351	Neolamprologus_brichardi
ENSGAFG00000012578	c1d	83	65.116	ENSNLEG00000032919	-	72	65.116	Nomascus_leucogenys
ENSGAFG00000012578	c1d	83	63.846	ENSOPRG00000009586	C1D	92	63.846	Ochotona_princeps
ENSGAFG00000012578	c1d	83	64.615	ENSODEG00000018885	-	94	64.615	Octodon_degus
ENSGAFG00000012578	c1d	74	60.870	ENSODEG00000018525	-	82	60.870	Octodon_degus
ENSGAFG00000012578	c1d	83	64.615	ENSODEG00000011242	-	92	64.615	Octodon_degus
ENSGAFG00000012578	c1d	97	76.974	ENSONIG00000001233	c1d	99	76.974	Oreochromis_niloticus
ENSGAFG00000012578	c1d	61	75.789	ENSOANG00000008385	C1D	95	69.811	Ornithorhynchus_anatinus
ENSGAFG00000012578	c1d	83	63.077	ENSOCUG00000025587	-	92	63.077	Oryctolagus_cuniculus
ENSGAFG00000012578	c1d	83	63.077	ENSOCUG00000009771	-	92	63.077	Oryctolagus_cuniculus
ENSGAFG00000012578	c1d	96	73.510	ENSORLG00000021968	c1d	97	73.510	Oryzias_latipes
ENSGAFG00000012578	c1d	96	74.172	ENSORLG00020000507	c1d	98	74.172	Oryzias_latipes_hni
ENSGAFG00000012578	c1d	98	72.078	ENSORLG00015004594	c1d	98	72.078	Oryzias_latipes_hsok
ENSGAFG00000012578	c1d	97	71.895	ENSOMEG00000004672	c1d	98	71.895	Oryzias_melastigma
ENSGAFG00000012578	c1d	83	63.846	ENSOGAG00000027934	-	92	63.846	Otolemur_garnettii
ENSGAFG00000012578	c1d	83	65.385	ENSOARG00000019931	C1D	92	65.385	Ovis_aries
ENSGAFG00000012578	c1d	83	65.116	ENSPPAG00000037847	-	92	64.615	Pan_paniscus
ENSGAFG00000012578	c1d	86	61.194	ENSPPAG00000040091	-	77	61.194	Pan_paniscus
ENSGAFG00000012578	c1d	83	65.385	ENSPPRG00000017045	-	92	65.385	Panthera_pardus
ENSGAFG00000012578	c1d	83	41.538	ENSPPRG00000022830	-	90	41.538	Panthera_pardus
ENSGAFG00000012578	c1d	83	65.385	ENSPTIG00000009414	C1D	92	65.385	Panthera_tigris_altaica
ENSGAFG00000012578	c1d	83	65.116	ENSPTRG00000023558	C1D	92	64.615	Pan_troglodytes
ENSGAFG00000012578	c1d	87	62.963	ENSPANG00000000501	-	96	62.963	Papio_anubis
ENSGAFG00000012578	c1d	83	64.341	ENSPANG00000002886	C1D	72	64.341	Papio_anubis
ENSGAFG00000012578	c1d	92	59.722	ENSPKIG00000004877	c1d	93	59.722	Paramormyrops_kingsleyae
ENSGAFG00000012578	c1d	85	61.029	ENSPSIG00000010015	C1D	94	61.029	Pelodiscus_sinensis
ENSGAFG00000012578	c1d	100	75.159	ENSPMGG00000009326	c1d	100	75.159	Periophthalmus_magnuspinnatus
ENSGAFG00000012578	c1d	84	57.252	ENSPCIG00000006831	-	91	57.252	Phascolarctos_cinereus
ENSGAFG00000012578	c1d	84	61.832	ENSPCIG00000018629	-	92	61.832	Phascolarctos_cinereus
ENSGAFG00000012578	c1d	100	95.513	ENSPFOG00000003686	c1d	100	95.513	Poecilia_formosa
ENSGAFG00000012578	c1d	100	95.513	ENSPLAG00000000228	c1d	100	95.513	Poecilia_latipinna
ENSGAFG00000012578	c1d	100	95.513	ENSPMEG00000023213	c1d	100	95.513	Poecilia_mexicana
ENSGAFG00000012578	c1d	100	93.590	ENSPREG00000000742	c1d	100	93.590	Poecilia_reticulata
ENSGAFG00000012578	c1d	83	64.615	ENSPPYG00000012354	C1D	71	64.615	Pongo_abelii
ENSGAFG00000012578	c1d	87	60.000	ENSPPYG00000002294	-	96	60.000	Pongo_abelii
ENSGAFG00000012578	c1d	83	53.077	ENSPCAG00000010088	C1D	73	53.077	Procavia_capensis
ENSGAFG00000012578	c1d	83	65.385	ENSPCOG00000016112	C1D	92	65.385	Propithecus_coquereli
ENSGAFG00000012578	c1d	83	65.891	ENSPVAG00000012692	C1D	72	65.891	Pteropus_vampyrus
ENSGAFG00000012578	c1d	95	73.649	ENSPNYG00000008789	c1d	99	77.027	Pundamilia_nyererei
ENSGAFG00000012578	c1d	91	65.493	ENSPNAG00000004219	c1d	94	65.493	Pygocentrus_nattereri
ENSGAFG00000012578	c1d	83	65.385	ENSRNOG00000005982	C1d	92	65.385	Rattus_norvegicus
ENSGAFG00000012578	c1d	87	61.029	ENSRBIG00000026211	-	96	61.029	Rhinopithecus_bieti
ENSGAFG00000012578	c1d	83	63.846	ENSRROG00000029013	C1D	92	63.846	Rhinopithecus_roxellana
ENSGAFG00000012578	c1d	87	61.765	ENSRROG00000005944	-	96	61.765	Rhinopithecus_roxellana
ENSGAFG00000012578	c1d	83	64.615	ENSSBOG00000025275	C1D	92	64.615	Saimiri_boliviensis_boliviensis
ENSGAFG00000012578	c1d	84	62.595	ENSSHAG00000008352	C1D	63	62.595	Sarcophilus_harrisii
ENSGAFG00000012578	c1d	89	64.029	ENSSFOG00015010861	c1d	98	64.029	Scleropages_formosus
ENSGAFG00000012578	c1d	95	77.181	ENSSMAG00000019230	c1d	96	77.181	Scophthalmus_maximus
ENSGAFG00000012578	c1d	95	80.537	ENSSDUG00000020213	c1d	96	80.537	Seriola_dumerili
ENSGAFG00000012578	c1d	95	79.866	ENSSLDG00000017371	c1d	96	79.866	Seriola_lalandi_dorsalis
ENSGAFG00000012578	c1d	76	66.949	ENSSPUG00000006525	C1D	88	63.281	Sphenodon_punctatus
ENSGAFG00000012578	c1d	97	77.632	ENSSPAG00000008574	c1d	98	78.289	Stegastes_partitus
ENSGAFG00000012578	c1d	83	65.385	ENSSSCG00000039331	-	92	65.385	Sus_scrofa
ENSGAFG00000012578	c1d	68	62.264	ENSSSCG00000035701	-	88	62.264	Sus_scrofa
ENSGAFG00000012578	c1d	76	68.067	ENSTGUG00000002367	C1D	83	68.067	Taeniopygia_guttata
ENSGAFG00000012578	c1d	95	69.128	ENSTRUG00000012245	c1d	90	69.128	Takifugu_rubripes
ENSGAFG00000012578	c1d	93	72.603	ENSTNIG00000009827	c1d	99	72.603	Tetraodon_nigroviridis
ENSGAFG00000012578	c1d	84	64.122	ENSTBEG00000009797	C1D	93	64.122	Tupaia_belangeri
ENSGAFG00000012578	c1d	83	64.615	ENSTTRG00000013982	C1D	75	64.615	Tursiops_truncatus
ENSGAFG00000012578	c1d	80	56.250	ENSUAMG00000025246	C1D	94	56.250	Ursus_americanus
ENSGAFG00000012578	c1d	83	65.385	ENSUMAG00000021118	-	92	65.385	Ursus_maritimus
ENSGAFG00000012578	c1d	61	54.082	ENSUMAG00000006451	-	86	54.630	Ursus_maritimus
ENSGAFG00000012578	c1d	83	66.923	ENSVPAG00000012080	C1D	73	66.923	Vicugna_pacos
ENSGAFG00000012578	c1d	83	66.154	ENSVVUG00000027629	C1D	81	66.154	Vulpes_vulpes
ENSGAFG00000012578	c1d	83	65.116	ENSXETG00000025934	c1d	89	65.116	Xenopus_tropicalis
ENSGAFG00000012578	c1d	100	94.231	ENSXCOG00000013813	c1d	100	94.231	Xiphophorus_couchianus
ENSGAFG00000012578	c1d	100	93.590	ENSXMAG00000022273	c1d	100	93.590	Xiphophorus_maculatus