EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012671 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8288 bases
Position: chrNHOQ01001560.1:1614644-1622931
Accession: ZDB-GENE-040823-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018745	PRP3	PF08572.10	2.6e-77	1	1
ENSGAFP00000018761	PRP3	PF08572.10	1.4e-57	1	1
ENSGAFP00000018761	PWI	PF01480.17	1.8e-11	1	1
ENSGAFP00000018745	PWI	PF01480.17	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018939	-	1752	-	ENSGAFP00000018761	583 (aa)	-	-
ENSGAFT00000018923	-	3269	-	ENSGAFP00000018745	689 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012671	prpf3	99	72.063	ENSG00000117360	PRPF3	100	72.350	Homo_sapiens
ENSGAFG00000012671	prpf3	100	87.536	ENSAPOG00000015584	prpf3	100	87.536	Acanthochromis_polyacanthus
ENSGAFG00000012671	prpf3	99	72.206	ENSAMEG00000001630	PRPF3	100	72.493	Ailuropoda_melanoleuca
ENSGAFG00000012671	prpf3	100	85.938	ENSACIG00000007876	prpf3	100	86.790	Amphilophus_citrinellus
ENSGAFG00000012671	prpf3	100	87.106	ENSAOCG00000011449	prpf3	100	87.268	Amphiprion_ocellaris
ENSGAFG00000012671	prpf3	100	86.963	ENSATEG00000023583	prpf3	100	86.963	Anabas_testudineus
ENSGAFG00000012671	prpf3	99	72.063	ENSAPLG00000002440	PRPF3	100	71.920	Anas_platyrhynchos
ENSGAFG00000012671	prpf3	99	71.327	ENSACAG00000003176	PRPF3	100	71.612	Anolis_carolinensis
ENSGAFG00000012671	prpf3	99	72.063	ENSANAG00000026138	PRPF3	100	72.350	Aotus_nancymaae
ENSGAFG00000012671	prpf3	100	85.632	ENSACLG00000020127	prpf3	100	85.632	Astatotilapia_calliptera
ENSGAFG00000012671	prpf3	100	79.663	ENSAMXG00000007306	prpf3	100	79.102	Astyanax_mexicanus
ENSGAFG00000012671	prpf3	99	72.063	ENSBTAG00000013946	PRPF3	100	72.350	Bos_taurus
ENSGAFG00000012671	prpf3	81	39.261	WBGene00010844	prp-3	96	35.608	Caenorhabditis_elegans
ENSGAFG00000012671	prpf3	99	72.063	ENSCJAG00000009926	PRPF3	100	72.350	Callithrix_jacchus
ENSGAFG00000012671	prpf3	99	72.063	ENSCAFG00000011820	PRPF3	100	72.350	Canis_familiaris
ENSGAFG00000012671	prpf3	87	69.598	ENSCAFG00020019653	PRPF3	100	72.242	Canis_lupus_dingo
ENSGAFG00000012671	prpf3	99	72.063	ENSCHIG00000015434	PRPF3	100	72.350	Capra_hircus
ENSGAFG00000012671	prpf3	99	72.206	ENSTSYG00000001383	PRPF3	100	72.493	Carlito_syrichta
ENSGAFG00000012671	prpf3	93	62.636	ENSCAPG00000017812	PRPF3	95	62.539	Cavia_aperea
ENSGAFG00000012671	prpf3	99	72.063	ENSCPOG00000008068	PRPF3	100	72.350	Cavia_porcellus
ENSGAFG00000012671	prpf3	99	72.063	ENSCCAG00000026380	PRPF3	100	72.350	Cebus_capucinus
ENSGAFG00000012671	prpf3	99	59.602	ENSCATG00000041778	PRPF3	100	59.886	Cercocebus_atys
ENSGAFG00000012671	prpf3	99	72.206	ENSCLAG00000015009	PRPF3	100	72.493	Chinchilla_lanigera
ENSGAFG00000012671	prpf3	76	81.387	ENSCHOG00000011645	PRPF3	76	81.022	Choloepus_hoffmanni
ENSGAFG00000012671	prpf3	99	71.920	ENSCPBG00000008216	PRPF3	100	72.206	Chrysemys_picta_bellii
ENSGAFG00000012671	prpf3	60	59.375	ENSCING00000003312	-	99	59.135	Ciona_intestinalis
ENSGAFG00000012671	prpf3	82	53.578	ENSCSAVG00000008720	-	97	53.752	Ciona_savignyi
ENSGAFG00000012671	prpf3	99	71.490	ENSCANG00000036769	PRPF3	100	71.777	Colobus_angolensis_palliatus
ENSGAFG00000012671	prpf3	99	72.063	ENSCGRG00001019100	Prpf3	100	72.350	Cricetulus_griseus_chok1gshd
ENSGAFG00000012671	prpf3	99	72.063	ENSCGRG00000007322	Prpf3	100	72.350	Cricetulus_griseus_crigri
ENSGAFG00000012671	prpf3	100	82.861	ENSCSEG00000002532	prpf3	100	83.428	Cynoglossus_semilaevis
ENSGAFG00000012671	prpf3	100	91.079	ENSCVAG00000009318	prpf3	100	91.079	Cyprinodon_variegatus
ENSGAFG00000012671	prpf3	100	79.801	ENSDARG00000086425	prpf3	100	79.861	Danio_rerio
ENSGAFG00000012671	prpf3	99	67.244	ENSDNOG00000005904	PRPF3	100	67.575	Dasypus_novemcinctus
ENSGAFG00000012671	prpf3	93	71.803	ENSDORG00000008664	Prpf3	100	72.111	Dipodomys_ordii
ENSGAFG00000012671	prpf3	80	53.369	FBgn0036915	Prp3	99	53.188	Drosophila_melanogaster
ENSGAFG00000012671	prpf3	99	72.063	ENSETEG00000019124	PRPF3	100	72.493	Echinops_telfairi
ENSGAFG00000012671	prpf3	100	60.992	ENSEBUG00000011680	prpf3	100	61.260	Eptatretus_burgeri
ENSGAFG00000012671	prpf3	99	72.206	ENSEASG00005001566	PRPF3	100	72.493	Equus_asinus_asinus
ENSGAFG00000012671	prpf3	99	72.063	ENSECAG00000019840	PRPF3	100	72.350	Equus_caballus
ENSGAFG00000012671	prpf3	85	72.336	ENSEEUG00000007338	PRPF3	85	72.109	Erinaceus_europaeus
ENSGAFG00000012671	prpf3	100	73.438	ENSELUG00000013624	prpf3	100	73.438	Esox_lucius
ENSGAFG00000012671	prpf3	99	72.063	ENSFCAG00000013940	PRPF3	100	72.350	Felis_catus
ENSGAFG00000012671	prpf3	99	71.920	ENSFDAG00000010365	PRPF3	100	72.206	Fukomys_damarensis
ENSGAFG00000012671	prpf3	100	91.787	ENSFHEG00000021746	prpf3	100	91.787	Fundulus_heteroclitus
ENSGAFG00000012671	prpf3	100	80.939	ENSGMOG00000008535	prpf3	100	80.939	Gadus_morhua
ENSGAFG00000012671	prpf3	99	72.206	ENSGALG00000028205	PRPF3	100	72.063	Gallus_gallus
ENSGAFG00000012671	prpf3	100	84.615	ENSGACG00000011792	prpf3	100	84.615	Gasterosteus_aculeatus
ENSGAFG00000012671	prpf3	99	71.777	ENSGAGG00000013765	PRPF3	100	74.234	Gopherus_agassizii
ENSGAFG00000012671	prpf3	85	77.581	ENSGGOG00000013174	PRPF3	100	77.286	Gorilla_gorilla
ENSGAFG00000012671	prpf3	100	85.920	ENSHBUG00000003493	prpf3	100	85.920	Haplochromis_burtoni
ENSGAFG00000012671	prpf3	99	53.228	ENSHGLG00000016033	-	100	52.941	Heterocephalus_glaber_female
ENSGAFG00000012671	prpf3	99	71.920	ENSHGLG00000016569	PRPF3	100	72.206	Heterocephalus_glaber_female
ENSGAFG00000012671	prpf3	99	53.152	ENSHGLG00100008951	-	100	52.798	Heterocephalus_glaber_male
ENSGAFG00000012671	prpf3	99	71.920	ENSHGLG00100007590	PRPF3	100	72.206	Heterocephalus_glaber_male
ENSGAFG00000012671	prpf3	100	82.143	ENSHCOG00000014058	prpf3	100	82.714	Hippocampus_comes
ENSGAFG00000012671	prpf3	100	78.805	ENSIPUG00000000902	PRPF3	100	78.521	Ictalurus_punctatus
ENSGAFG00000012671	prpf3	99	72.063	ENSSTOG00000001889	PRPF3	100	72.350	Ictidomys_tridecemlineatus
ENSGAFG00000012671	prpf3	100	87.268	ENSKMAG00000001390	prpf3	100	87.393	Kryptolebias_marmoratus
ENSGAFG00000012671	prpf3	100	86.325	ENSLBEG00000026310	prpf3	100	87.179	Labrus_bergylta
ENSGAFG00000012671	prpf3	100	62.336	ENSLACG00000010541	PRPF3	100	66.769	Latimeria_chalumnae
ENSGAFG00000012671	prpf3	99	72.063	ENSLAFG00000004713	PRPF3	100	72.350	Loxodonta_africana
ENSGAFG00000012671	prpf3	99	72.063	ENSMFAG00000039791	PRPF3	100	72.350	Macaca_fascicularis
ENSGAFG00000012671	prpf3	100	66.998	ENSMMUG00000016301	PRPF3	97	73.237	Macaca_mulatta
ENSGAFG00000012671	prpf3	99	72.063	ENSMNEG00000038161	PRPF3	100	72.350	Macaca_nemestrina
ENSGAFG00000012671	prpf3	98	49.566	ENSMLEG00000041065	-	97	49.566	Mandrillus_leucophaeus
ENSGAFG00000012671	prpf3	85	77.581	ENSMLEG00000040609	PRPF3	100	77.286	Mandrillus_leucophaeus
ENSGAFG00000012671	prpf3	100	84.900	ENSMAMG00000014968	prpf3	100	84.900	Mastacembelus_armatus
ENSGAFG00000012671	prpf3	100	86.344	ENSMZEG00005015970	prpf3	100	86.771	Maylandia_zebra
ENSGAFG00000012671	prpf3	99	72.206	ENSMGAG00000000707	PRPF3	100	72.063	Meleagris_gallopavo
ENSGAFG00000012671	prpf3	99	71.920	ENSMAUG00000017112	Prpf3	100	72.350	Mesocricetus_auratus
ENSGAFG00000012671	prpf3	99	71.920	ENSMICG00000015386	PRPF3	100	74.414	Microcebus_murinus
ENSGAFG00000012671	prpf3	99	71.920	ENSMOCG00000000242	Prpf3	100	72.206	Microtus_ochrogaster
ENSGAFG00000012671	prpf3	100	79.549	ENSMMOG00000016131	prpf3	100	79.690	Mola_mola
ENSGAFG00000012671	prpf3	99	72.063	ENSMODG00000018774	PRPF3	100	72.350	Monodelphis_domestica
ENSGAFG00000012671	prpf3	100	82.092	ENSMALG00000007257	prpf3	100	82.235	Monopterus_albus
ENSGAFG00000012671	prpf3	99	71.777	MGP_CAROLIEiJ_G0025354	Prpf3	100	72.063	Mus_caroli
ENSGAFG00000012671	prpf3	99	71.777	ENSMUSG00000015748	Prpf3	100	72.063	Mus_musculus
ENSGAFG00000012671	prpf3	99	71.693	MGP_PahariEiJ_G0026798	Prpf3	100	71.977	Mus_pahari
ENSGAFG00000012671	prpf3	99	71.777	MGP_SPRETEiJ_G0026298	Prpf3	100	72.063	Mus_spretus
ENSGAFG00000012671	prpf3	99	70.201	ENSMPUG00000005080	PRPF3	100	70.487	Mustela_putorius_furo
ENSGAFG00000012671	prpf3	99	71.674	ENSMLUG00000004646	-	100	71.960	Myotis_lucifugus
ENSGAFG00000012671	prpf3	99	72.063	ENSNGAG00000000910	Prpf3	100	72.350	Nannospalax_galili
ENSGAFG00000012671	prpf3	100	85.373	ENSNBRG00000003462	prpf3	100	85.795	Neolamprologus_brichardi
ENSGAFG00000012671	prpf3	100	66.998	ENSNLEG00000009841	PRPF3	99	73.237	Nomascus_leucogenys
ENSGAFG00000012671	prpf3	83	63.422	ENSMEUG00000008733	PRPF3	89	63.750	Notamacropus_eugenii
ENSGAFG00000012671	prpf3	99	72.063	ENSOPRG00000010139	PRPF3	100	72.350	Ochotona_princeps
ENSGAFG00000012671	prpf3	99	72.063	ENSODEG00000011363	-	100	72.350	Octodon_degus
ENSGAFG00000012671	prpf3	99	54.779	ENSODEG00000014412	-	100	54.922	Octodon_degus
ENSGAFG00000012671	prpf3	100	86.629	ENSONIG00000006394	prpf3	100	87.055	Oreochromis_niloticus
ENSGAFG00000012671	prpf3	99	55.747	ENSOANG00000015441	PRPF3	100	55.540	Ornithorhynchus_anatinus
ENSGAFG00000012671	prpf3	99	72.063	ENSOCUG00000011760	PRPF3	100	72.350	Oryctolagus_cuniculus
ENSGAFG00000012671	prpf3	100	86.187	ENSORLG00000010330	prpf3	100	85.755	Oryzias_latipes
ENSGAFG00000012671	prpf3	100	86.043	ENSORLG00020009054	prpf3	100	85.612	Oryzias_latipes_hni
ENSGAFG00000012671	prpf3	100	85.755	ENSORLG00015015016	prpf3	100	85.324	Oryzias_latipes_hsok
ENSGAFG00000012671	prpf3	100	87.356	ENSOMEG00000000940	prpf3	100	87.356	Oryzias_melastigma
ENSGAFG00000012671	prpf3	99	68.091	ENSOGAG00000005352	PRPF3	100	68.376	Otolemur_garnettii
ENSGAFG00000012671	prpf3	99	72.063	ENSOARG00000020798	PRPF3	100	72.350	Ovis_aries
ENSGAFG00000012671	prpf3	98	55.750	ENSPPAG00000043769	-	99	55.087	Pan_paniscus
ENSGAFG00000012671	prpf3	99	71.920	ENSPPAG00000030983	PRPF3	100	72.206	Pan_paniscus
ENSGAFG00000012671	prpf3	99	72.063	ENSPPRG00000000731	PRPF3	100	72.350	Panthera_pardus
ENSGAFG00000012671	prpf3	99	72.063	ENSPTIG00000005516	PRPF3	100	72.350	Panthera_tigris_altaica
ENSGAFG00000012671	prpf3	99	72.063	ENSPTRG00000001254	PRPF3	100	72.350	Pan_troglodytes
ENSGAFG00000012671	prpf3	98	54.731	ENSPTRG00000047819	-	99	54.070	Pan_troglodytes
ENSGAFG00000012671	prpf3	99	71.920	ENSPANG00000000499	PRPF3	100	72.206	Papio_anubis
ENSGAFG00000012671	prpf3	100	81.250	ENSPKIG00000010501	prpf3	100	80.824	Paramormyrops_kingsleyae
ENSGAFG00000012671	prpf3	99	72.310	ENSPSIG00000014877	PRPF3	100	72.310	Pelodiscus_sinensis
ENSGAFG00000012671	prpf3	100	75.252	ENSPMGG00000007776	prpf3	100	75.108	Periophthalmus_magnuspinnatus
ENSGAFG00000012671	prpf3	99	72.063	ENSPEMG00000011672	Prpf3	100	72.350	Peromyscus_maniculatus_bairdii
ENSGAFG00000012671	prpf3	62	72.082	ENSPMAG00000005588	prpf3	97	72.082	Petromyzon_marinus
ENSGAFG00000012671	prpf3	99	72.063	ENSPCIG00000008795	PRPF3	100	72.350	Phascolarctos_cinereus
ENSGAFG00000012671	prpf3	100	96.439	ENSPFOG00000013638	prpf3	100	96.439	Poecilia_formosa
ENSGAFG00000012671	prpf3	100	97.829	ENSPLAG00000018103	prpf3	100	97.829	Poecilia_latipinna
ENSGAFG00000012671	prpf3	100	97.829	ENSPMEG00000023546	prpf3	100	97.829	Poecilia_mexicana
ENSGAFG00000012671	prpf3	100	97.685	ENSPREG00000017216	prpf3	100	97.685	Poecilia_reticulata
ENSGAFG00000012671	prpf3	86	61.079	ENSPPYG00000018646	-	99	63.447	Pongo_abelii
ENSGAFG00000012671	prpf3	100	66.998	ENSPPYG00000000900	PRPF3	99	71.231	Pongo_abelii
ENSGAFG00000012671	prpf3	87	72.772	ENSPCAG00000014908	PRPF3	87	73.102	Procavia_capensis
ENSGAFG00000012671	prpf3	99	71.920	ENSPCOG00000013828	PRPF3	100	72.206	Propithecus_coquereli
ENSGAFG00000012671	prpf3	99	71.060	ENSPVAG00000013472	PRPF3	100	71.347	Pteropus_vampyrus
ENSGAFG00000012671	prpf3	100	85.776	ENSPNYG00000004279	prpf3	100	85.776	Pundamilia_nyererei
ENSGAFG00000012671	prpf3	100	79.804	ENSPNAG00000001799	prpf3	100	79.243	Pygocentrus_nattereri
ENSGAFG00000012671	prpf3	99	71.920	ENSRNOG00000025629	Prpf3	100	72.206	Rattus_norvegicus
ENSGAFG00000012671	prpf3	80	83.333	ENSRBIG00000028854	PRPF3	98	72.794	Rhinopithecus_bieti
ENSGAFG00000012671	prpf3	99	72.063	ENSRROG00000027464	PRPF3	100	72.350	Rhinopithecus_roxellana
ENSGAFG00000012671	prpf3	99	65.759	ENSSBOG00000033104	PRPF3	100	66.046	Saimiri_boliviensis_boliviensis
ENSGAFG00000012671	prpf3	99	71.960	ENSSHAG00000009548	PRPF3	100	72.246	Sarcophilus_harrisii
ENSGAFG00000012671	prpf3	100	79.666	ENSSFOG00015022014	prpf3	100	79.109	Scleropages_formosus
ENSGAFG00000012671	prpf3	100	84.930	ENSSMAG00000015739	prpf3	100	84.930	Scophthalmus_maximus
ENSGAFG00000012671	prpf3	100	82.583	ENSSDUG00000006840	prpf3	100	82.583	Seriola_dumerili
ENSGAFG00000012671	prpf3	100	83.826	ENSSLDG00000015423	prpf3	100	84.810	Seriola_lalandi_dorsalis
ENSGAFG00000012671	prpf3	99	72.063	ENSSARG00000011064	PRPF3	100	72.350	Sorex_araneus
ENSGAFG00000012671	prpf3	99	71.610	ENSSPUG00000000809	PRPF3	100	71.469	Sphenodon_punctatus
ENSGAFG00000012671	prpf3	100	85.592	ENSSPAG00000018721	prpf3	100	86.733	Stegastes_partitus
ENSGAFG00000012671	prpf3	99	72.063	ENSSSCG00000030119	PRPF3	100	74.595	Sus_scrofa
ENSGAFG00000012671	prpf3	99	62.143	ENSTGUG00000004552	PRPF3	100	62.000	Taeniopygia_guttata
ENSGAFG00000012671	prpf3	100	81.214	ENSTRUG00000014923	prpf3	100	81.214	Takifugu_rubripes
ENSGAFG00000012671	prpf3	99	81.676	ENSTNIG00000008058	prpf3	100	81.392	Tetraodon_nigroviridis
ENSGAFG00000012671	prpf3	81	71.655	ENSTBEG00000014072	PRPF3	88	72.789	Tupaia_belangeri
ENSGAFG00000012671	prpf3	99	67.192	ENSTTRG00000010616	PRPF3	100	67.479	Tursiops_truncatus
ENSGAFG00000012671	prpf3	79	74.775	ENSUAMG00000009345	PRPF3	100	74.595	Ursus_americanus
ENSGAFG00000012671	prpf3	99	72.063	ENSUMAG00000003720	PRPF3	100	72.350	Ursus_maritimus
ENSGAFG00000012671	prpf3	88	77.324	ENSVPAG00000005425	PRPF3	89	77.098	Vicugna_pacos
ENSGAFG00000012671	prpf3	99	72.493	ENSVVUG00000007933	PRPF3	100	72.350	Vulpes_vulpes
ENSGAFG00000012671	prpf3	99	71.795	ENSXETG00000018654	prpf3	100	72.080	Xenopus_tropicalis
ENSGAFG00000012671	prpf3	100	97.685	ENSXMAG00000016347	prpf3	100	97.685	Xiphophorus_maculatus