EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012683 (Gene tree)
Gene ID: -
Gene Symbol: thumpd2
Alias: -
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 12456 bases
Position: chrNHOQ01002889.1:1644060-1656515
Accession: ZDB-GENE-090428-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018760	THUMP	PF02926.17	1.9e-07	1	1
ENSGAFP00000018776	THUMP	PF02926.17	2e-07	1	1
ENSGAFP00000018767	THUMP	PF02926.17	2.1e-07	1	1
ENSGAFP00000018760	MTS	PF05175.14	1.9e-07	1	1
ENSGAFP00000018776	MTS	PF05175.14	1.9e-07	1	1
ENSGAFP00000018767	MTS	PF05175.14	2.1e-07	1	1
ENSGAFP00000018760	UPF0020	PF01170.18	1.3e-26	1	1
ENSGAFP00000018776	UPF0020	PF01170.18	1.4e-26	1	1
ENSGAFP00000018767	UPF0020	PF01170.18	1.5e-26	1	1
ENSGAFP00000018760	Methyltransf_31	PF13847.6	1.8e-12	1	1
ENSGAFP00000018776	Methyltransf_31	PF13847.6	1.8e-12	1	1
ENSGAFP00000018767	Methyltransf_31	PF13847.6	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018938	-	2463	-	ENSGAFP00000018760	491 (aa)	-	-
ENSGAFT00000018954	-	1842	-	ENSGAFP00000018776	500 (aa)	-	-
ENSGAFT00000018947	-	2358	-	ENSGAFP00000018767	520 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012683	thumpd2	99	37.403	ENSG00000138050	THUMPD2	96	37.524	Homo_sapiens
ENSGAFG00000012683	thumpd2	99	56.424	ENSAPOG00000001802	-	99	56.537	Acanthochromis_polyacanthus
ENSGAFG00000012683	thumpd2	98	38.812	ENSAMEG00000008664	THUMPD2	99	38.723	Ailuropoda_melanoleuca
ENSGAFG00000012683	thumpd2	55	78.205	ENSACIG00000011677	THUMPD2	65	78.205	Amphilophus_citrinellus
ENSGAFG00000012683	thumpd2	99	55.232	ENSAOCG00000000927	THUMPD2	99	57.739	Amphiprion_ocellaris
ENSGAFG00000012683	thumpd2	99	55.403	ENSAPEG00000000981	thumpd2	99	57.739	Amphiprion_percula
ENSGAFG00000012683	thumpd2	99	50.711	ENSATEG00000012329	thumpd2	99	50.711	Anabas_testudineus
ENSGAFG00000012683	thumpd2	99	36.566	ENSAPLG00000008775	THUMPD2	99	37.074	Anas_platyrhynchos
ENSGAFG00000012683	thumpd2	98	37.475	ENSACAG00000000538	THUMPD2	95	37.349	Anolis_carolinensis
ENSGAFG00000012683	thumpd2	99	38.878	ENSANAG00000034298	THUMPD2	96	38.476	Aotus_nancymaae
ENSGAFG00000012683	thumpd2	99	59.398	ENSACLG00000025840	thumpd2	91	76.712	Astatotilapia_calliptera
ENSGAFG00000012683	thumpd2	83	44.637	ENSAMXG00000011080	thumpd2	96	44.863	Astyanax_mexicanus
ENSGAFG00000012683	thumpd2	99	37.573	ENSBTAG00000004722	THUMPD2	96	37.500	Bos_taurus
ENSGAFG00000012683	thumpd2	99	38.150	ENSCJAG00000014891	THUMPD2	96	38.899	Callithrix_jacchus
ENSGAFG00000012683	thumpd2	99	37.833	ENSCAFG00000006471	THUMPD2	96	38.131	Canis_familiaris
ENSGAFG00000012683	thumpd2	99	37.160	ENSCAFG00020021695	THUMPD2	99	37.380	Canis_lupus_dingo
ENSGAFG00000012683	thumpd2	99	37.647	ENSCHIG00000013921	THUMPD2	96	37.572	Capra_hircus
ENSGAFG00000012683	thumpd2	98	38.037	ENSTSYG00000010555	THUMPD2	96	36.977	Carlito_syrichta
ENSGAFG00000012683	thumpd2	99	37.525	ENSCPOG00000003368	THUMPD2	96	38.031	Cavia_porcellus
ENSGAFG00000012683	thumpd2	99	37.643	ENSCCAG00000034405	THUMPD2	96	38.131	Cebus_capucinus
ENSGAFG00000012683	thumpd2	99	37.714	ENSCATG00000012396	THUMPD2	96	38.202	Cercocebus_atys
ENSGAFG00000012683	thumpd2	99	36.622	ENSCLAG00000003029	THUMPD2	96	37.127	Chinchilla_lanigera
ENSGAFG00000012683	thumpd2	62	43.963	ENSCSAG00000012431	THUMPD2	75	43.963	Chlorocebus_sabaeus
ENSGAFG00000012683	thumpd2	78	33.163	ENSCHOG00000000360	THUMPD2	99	33.163	Choloepus_hoffmanni
ENSGAFG00000012683	thumpd2	99	38.160	ENSCPBG00000018272	THUMPD2	94	38.269	Chrysemys_picta_bellii
ENSGAFG00000012683	thumpd2	99	38.150	ENSCANG00000032596	THUMPD2	96	38.388	Colobus_angolensis_palliatus
ENSGAFG00000012683	thumpd2	99	37.052	ENSCGRG00001009939	Thumpd2	74	40.706	Cricetulus_griseus_chok1gshd
ENSGAFG00000012683	thumpd2	93	37.263	ENSCGRG00000006284	Thumpd2	74	40.741	Cricetulus_griseus_crigri
ENSGAFG00000012683	thumpd2	55	45.302	ENSCSEG00000000512	-	97	46.309	Cynoglossus_semilaevis
ENSGAFG00000012683	thumpd2	90	71.396	ENSCVAG00000007942	THUMPD2	100	70.946	Cyprinodon_variegatus
ENSGAFG00000012683	thumpd2	99	40.361	ENSDARG00000093070	thumpd2	98	42.012	Danio_rerio
ENSGAFG00000012683	thumpd2	99	37.769	ENSDNOG00000019834	THUMPD2	96	38.241	Dasypus_novemcinctus
ENSGAFG00000012683	thumpd2	98	34.623	ENSETEG00000001300	THUMPD2	99	33.868	Echinops_telfairi
ENSGAFG00000012683	thumpd2	56	30.556	ENSEBUG00000004221	thumpd3	58	31.890	Eptatretus_burgeri
ENSGAFG00000012683	thumpd2	56	39.209	ENSEBUG00000010906	THUMPD2	85	38.849	Eptatretus_burgeri
ENSGAFG00000012683	thumpd2	99	36.471	ENSEASG00005005106	THUMPD2	93	37.500	Equus_asinus_asinus
ENSGAFG00000012683	thumpd2	99	36.667	ENSECAG00000010799	THUMPD2	93	36.932	Equus_caballus
ENSGAFG00000012683	thumpd2	81	41.542	ENSEEUG00000000105	THUMPD2	85	41.542	Erinaceus_europaeus
ENSGAFG00000012683	thumpd2	99	46.400	ENSELUG00000003735	thumpd2	93	46.562	Esox_lucius
ENSGAFG00000012683	thumpd2	99	37.870	ENSFCAG00000006809	THUMPD2	96	38.973	Felis_catus
ENSGAFG00000012683	thumpd2	98	38.889	ENSFALG00000008655	THUMPD2	89	39.506	Ficedula_albicollis
ENSGAFG00000012683	thumpd2	100	77.137	ENSFHEG00000011402	thumpd2	98	76.923	Fundulus_heteroclitus
ENSGAFG00000012683	thumpd2	60	42.444	ENSGMOG00000002236	-	100	43.042	Gadus_morhua
ENSGAFG00000012683	thumpd2	59	46.358	ENSGALG00000009119	THUMPD2	71	45.791	Gallus_gallus
ENSGAFG00000012683	thumpd2	78	37.913	ENSGAGG00000001325	THUMPD2	94	37.913	Gopherus_agassizii
ENSGAFG00000012683	thumpd2	99	37.333	ENSGGOG00000001608	THUMPD2	96	37.640	Gorilla_gorilla
ENSGAFG00000012683	thumpd2	84	52.579	ENSHBUG00000011780	-	98	53.373	Haplochromis_burtoni
ENSGAFG00000012683	thumpd2	99	37.356	ENSHGLG00000019145	THUMPD2	96	37.853	Heterocephalus_glaber_female
ENSGAFG00000012683	thumpd2	81	47.458	ENSIPUG00000015283	thumpd2	95	48.780	Ictalurus_punctatus
ENSGAFG00000012683	thumpd2	99	38.431	ENSSTOG00000027472	THUMPD2	97	38.131	Ictidomys_tridecemlineatus
ENSGAFG00000012683	thumpd2	98	35.471	ENSJJAG00000020374	Thumpd2	96	35.542	Jaculus_jaculus
ENSGAFG00000012683	thumpd2	85	68.000	ENSLBEG00000007585	THUMPD2	99	52.224	Labrus_bergylta
ENSGAFG00000012683	thumpd2	52	30.769	ENSLBEG00000012252	thumpd3	51	31.179	Labrus_bergylta
ENSGAFG00000012683	thumpd2	99	45.941	ENSLOCG00000015747	THUMPD2	97	46.897	Lepisosteus_oculatus
ENSGAFG00000012683	thumpd2	60	34.202	ENSLAFG00000005383	-	97	33.448	Loxodonta_africana
ENSGAFG00000012683	thumpd2	99	37.714	ENSMFAG00000031464	THUMPD2	96	38.202	Macaca_fascicularis
ENSGAFG00000012683	thumpd2	99	37.714	ENSMMUG00000011841	THUMPD2	96	38.202	Macaca_mulatta
ENSGAFG00000012683	thumpd2	99	37.714	ENSMNEG00000037438	THUMPD2	96	38.202	Macaca_nemestrina
ENSGAFG00000012683	thumpd2	98	37.402	ENSMLEG00000031490	THUMPD2	99	37.402	Mandrillus_leucophaeus
ENSGAFG00000012683	thumpd2	70	70.833	ENSMAMG00000022090	thumpd2	83	70.833	Mastacembelus_armatus
ENSGAFG00000012683	thumpd2	99	55.757	ENSMZEG00005027354	-	98	57.331	Maylandia_zebra
ENSGAFG00000012683	thumpd2	99	36.145	ENSMGAG00000007605	THUMPD2	98	36.527	Meleagris_gallopavo
ENSGAFG00000012683	thumpd2	99	36.768	ENSMAUG00000012866	Thumpd2	91	37.087	Mesocricetus_auratus
ENSGAFG00000012683	thumpd2	99	37.209	ENSMICG00000008042	THUMPD2	96	37.833	Microcebus_murinus
ENSGAFG00000012683	thumpd2	99	37.843	ENSMOCG00000018094	Thumpd2	75	40.845	Microtus_ochrogaster
ENSGAFG00000012683	thumpd2	74	65.263	ENSMMOG00000007356	thumpd2	94	66.304	Mola_mola
ENSGAFG00000012683	thumpd2	98	36.566	ENSMODG00000009129	THUMPD2	99	36.566	Monodelphis_domestica
ENSGAFG00000012683	thumpd2	74	60.993	ENSMALG00000020471	thumpd2	99	59.919	Monopterus_albus
ENSGAFG00000012683	thumpd2	99	35.977	MGP_CAROLIEiJ_G0021912	Thumpd2	74	39.401	Mus_caroli
ENSGAFG00000012683	thumpd2	99	35.882	ENSMUSG00000024246	Thumpd2	91	36.311	Mus_musculus
ENSGAFG00000012683	thumpd2	99	35.490	MGP_PahariEiJ_G0020902	Thumpd2	91	36.117	Mus_pahari
ENSGAFG00000012683	thumpd2	99	35.453	MGP_SPRETEiJ_G0022828	Thumpd2	91	35.728	Mus_spretus
ENSGAFG00000012683	thumpd2	99	37.500	ENSMPUG00000010563	THUMPD2	95	38.941	Mustela_putorius_furo
ENSGAFG00000012683	thumpd2	99	36.128	ENSMLUG00000009688	THUMPD2	99	36.489	Myotis_lucifugus
ENSGAFG00000012683	thumpd2	99	37.087	ENSNGAG00000016396	Thumpd2	94	37.595	Nannospalax_galili
ENSGAFG00000012683	thumpd2	99	36.952	ENSNLEG00000016562	THUMPD2	96	37.570	Nomascus_leucogenys
ENSGAFG00000012683	thumpd2	99	35.743	ENSMEUG00000014815	THUMPD2	98	36.056	Notamacropus_eugenii
ENSGAFG00000012683	thumpd2	98	34.082	ENSOPRG00000013478	THUMPD2	99	33.607	Ochotona_princeps
ENSGAFG00000012683	thumpd2	87	63.696	ENSONIG00000001165	thumpd2	99	63.793	Oreochromis_niloticus
ENSGAFG00000012683	thumpd2	74	39.623	ENSOANG00000004028	-	95	40.209	Ornithorhynchus_anatinus
ENSGAFG00000012683	thumpd2	99	38.976	ENSOCUG00000003257	THUMPD2	96	40.678	Oryctolagus_cuniculus
ENSGAFG00000012683	thumpd2	99	58.350	ENSORLG00000002138	thumpd2	98	59.073	Oryzias_latipes
ENSGAFG00000012683	thumpd2	90	55.902	ENSORLG00020018792	thumpd2	100	56.125	Oryzias_latipes_hni
ENSGAFG00000012683	thumpd2	99	58.893	ENSORLG00015005237	thumpd2	98	59.266	Oryzias_latipes_hsok
ENSGAFG00000012683	thumpd2	99	48.276	ENSOMEG00000023563	thumpd2	90	66.383	Oryzias_melastigma
ENSGAFG00000012683	thumpd2	97	36.042	ENSOGAG00000010890	THUMPD2	98	36.289	Otolemur_garnettii
ENSGAFG00000012683	thumpd2	99	35.953	ENSOARG00000007841	THUMPD2	96	35.907	Ovis_aries
ENSGAFG00000012683	thumpd2	99	37.333	ENSPPAG00000033850	THUMPD2	99	37.500	Pan_paniscus
ENSGAFG00000012683	thumpd2	99	38.878	ENSPPRG00000003874	THUMPD2	96	39.354	Panthera_pardus
ENSGAFG00000012683	thumpd2	98	38.600	ENSPTIG00000004118	THUMPD2	95	38.600	Panthera_tigris_altaica
ENSGAFG00000012683	thumpd2	99	37.333	ENSPTRG00000011860	THUMPD2	96	37.640	Pan_troglodytes
ENSGAFG00000012683	thumpd2	99	37.524	ENSPANG00000004807	THUMPD2	96	37.757	Papio_anubis
ENSGAFG00000012683	thumpd2	78	52.414	ENSPKIG00000022207	THUMPD2	89	41.765	Paramormyrops_kingsleyae
ENSGAFG00000012683	thumpd2	98	36.040	ENSPSIG00000003159	THUMPD2	99	35.842	Pelodiscus_sinensis
ENSGAFG00000012683	thumpd2	99	36.863	ENSPEMG00000009015	Thumpd2	74	41.080	Peromyscus_maniculatus_bairdii
ENSGAFG00000012683	thumpd2	81	36.715	ENSPMAG00000006922	thumpd2	97	36.715	Petromyzon_marinus
ENSGAFG00000012683	thumpd2	99	33.004	ENSPCIG00000022621	THUMPD2	93	33.204	Phascolarctos_cinereus
ENSGAFG00000012683	thumpd2	100	87.400	ENSPFOG00000006461	thumpd2	99	87.308	Poecilia_formosa
ENSGAFG00000012683	thumpd2	77	86.102	ENSPLAG00000010700	THUMPD2	90	86.102	Poecilia_latipinna
ENSGAFG00000012683	thumpd2	83	92.791	ENSPMEG00000009573	-	94	92.791	Poecilia_mexicana
ENSGAFG00000012683	thumpd2	74	94.539	ENSPREG00000001603	THUMPD2	92	94.539	Poecilia_reticulata
ENSGAFG00000012683	thumpd2	99	36.381	ENSPPYG00000012470	THUMPD2	99	36.486	Pongo_abelii
ENSGAFG00000012683	thumpd2	98	31.161	ENSPCAG00000007326	THUMPD2	99	30.661	Procavia_capensis
ENSGAFG00000012683	thumpd2	99	38.388	ENSPCOG00000000396	-	96	39.623	Propithecus_coquereli
ENSGAFG00000012683	thumpd2	99	33.464	ENSPCOG00000028456	-	94	33.464	Propithecus_coquereli
ENSGAFG00000012683	thumpd2	99	36.217	ENSPVAG00000008101	THUMPD2	99	35.984	Pteropus_vampyrus
ENSGAFG00000012683	thumpd2	76	66.807	ENSPNYG00000009804	THUMPD2	95	66.807	Pundamilia_nyererei
ENSGAFG00000012683	thumpd2	99	42.886	ENSPNAG00000023224	thumpd2	98	43.023	Pygocentrus_nattereri
ENSGAFG00000012683	thumpd2	99	35.225	ENSRNOG00000008291	Thumpd2	86	38.015	Rattus_norvegicus
ENSGAFG00000012683	thumpd2	99	35.714	ENSRBIG00000034978	THUMPD2	95	36.243	Rhinopithecus_bieti
ENSGAFG00000012683	thumpd2	99	37.524	ENSRROG00000031707	THUMPD2	99	37.812	Rhinopithecus_roxellana
ENSGAFG00000012683	thumpd2	99	37.885	ENSSBOG00000015419	THUMPD2	97	38.491	Saimiri_boliviensis_boliviensis
ENSGAFG00000012683	thumpd2	99	38.723	ENSSHAG00000010785	THUMPD2	98	38.812	Sarcophilus_harrisii
ENSGAFG00000012683	thumpd2	63	60.938	ENSSFOG00015006959	THUMPD2	90	60.938	Scleropages_formosus
ENSGAFG00000012683	thumpd2	72	50.844	ENSSMAG00000019604	-	81	51.688	Scophthalmus_maximus
ENSGAFG00000012683	thumpd2	99	55.387	ENSSDUG00000019898	THUMPD2	99	55.556	Seriola_dumerili
ENSGAFG00000012683	thumpd2	99	55.556	ENSSLDG00000016788	-	99	55.556	Seriola_lalandi_dorsalis
ENSGAFG00000012683	thumpd2	89	38.667	ENSSPUG00000006316	THUMPD2	98	38.170	Sphenodon_punctatus
ENSGAFG00000012683	thumpd2	99	36.614	ENSSSCG00000008470	THUMPD2	96	36.902	Sus_scrofa
ENSGAFG00000012683	thumpd2	83	42.054	ENSTGUG00000012782	THUMPD2	98	42.233	Taeniopygia_guttata
ENSGAFG00000012683	thumpd2	99	50.282	ENSTRUG00000022712	THUMPD2	99	50.274	Takifugu_rubripes
ENSGAFG00000012683	thumpd2	59	51.007	ENSTNIG00000009817	-	100	51.007	Tetraodon_nigroviridis
ENSGAFG00000012683	thumpd2	55	36.786	ENSTBEG00000008269	-	58	36.786	Tupaia_belangeri
ENSGAFG00000012683	thumpd2	99	37.843	ENSTTRG00000005603	THUMPD2	99	37.938	Tursiops_truncatus
ENSGAFG00000012683	thumpd2	99	39.354	ENSUAMG00000011048	THUMPD2	93	39.736	Ursus_americanus
ENSGAFG00000012683	thumpd2	99	38.372	ENSUMAG00000013316	THUMPD2	96	38.058	Ursus_maritimus
ENSGAFG00000012683	thumpd2	86	35.570	ENSVPAG00000007570	THUMPD2	85	35.570	Vicugna_pacos
ENSGAFG00000012683	thumpd2	99	37.087	ENSVVUG00000018628	THUMPD2	99	37.308	Vulpes_vulpes
ENSGAFG00000012683	thumpd2	99	36.235	ENSXETG00000018494	thumpd2	82	39.529	Xenopus_tropicalis
ENSGAFG00000012683	thumpd2	80	94.245	ENSXCOG00000013456	-	99	94.245	Xiphophorus_couchianus
ENSGAFG00000012683	thumpd2	100	95.800	ENSXMAG00000017249	thumpd2	99	95.385	Xiphophorus_maculatus